Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 AGGF1P6-201ENST00000569213 976 ntBASIC4.29□□□□□ -1.72
CCSER1Q9C0I3 AL606490.9-201ENST00000603331 271 ntBASIC4.29□□□□□ -1.72
CCSER1Q9C0I3 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CCSER1Q9C0I3 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
CCSER1Q9C0I3 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCSER1Q9C0I3 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CCSER1Q9C0I3 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CCSER1Q9C0I3 NCAPGP1-201ENST00000505112 1814 ntBASIC4.28□□□□□ -1.72
CCSER1Q9C0I3 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.28□□□□□ -1.72
CCSER1Q9C0I3 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CCSER1Q9C0I3 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
CCSER1Q9C0I3 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CCSER1Q9C0I3 MIR3074-201ENST00000384885 81 ntBASIC4.28□□□□□ -1.72
CCSER1Q9C0I3 ZNF603P-201ENST00000405613 487 ntBASIC4.28□□□□□ -1.72
CCSER1Q9C0I3 HNRNPDP2-201ENST00000406475 478 ntBASIC4.28□□□□□ -1.72
CCSER1Q9C0I3 MIR1183-201ENST00000408856 89 ntBASIC4.28□□□□□ -1.72
CCSER1Q9C0I3 MTATP6P19-201ENST00000413797 659 ntBASIC4.28□□□□□ -1.72
CCSER1Q9C0I3 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.28□□□□□ -1.72
CCSER1Q9C0I3 RPS12P23-201ENST00000419579 400 ntBASIC4.28□□□□□ -1.72
CCSER1Q9C0I3 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC4.28□□□□□ -1.72
CCSER1Q9C0I3 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.28□□□□□ -1.72
CCSER1Q9C0I3 ZFAND6P1-201ENST00000434138 605 ntBASIC4.28□□□□□ -1.72
CCSER1Q9C0I3 MTND2P3-201ENST00000452458 470 ntBASIC4.28□□□□□ -1.72
CCSER1Q9C0I3 NDUFAF4P3-201ENST00000456468 525 ntBASIC4.28□□□□□ -1.72
CCSER1Q9C0I3 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC4.28□□□□□ -1.72
CCSER1Q9C0I3 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC4.28□□□□□ -1.72
CCSER1Q9C0I3 OR5H4P-201ENST00000510851 923 ntBASIC4.28□□□□□ -1.72
CCSER1Q9C0I3 SCARNA14-201ENST00000516903 136 ntBASIC4.28□□□□□ -1.72
CCSER1Q9C0I3 RNU6-352P-201ENST00000516908 107 ntBASIC4.28□□□□□ -1.72
CCSER1Q9C0I3 AC103833.1-201ENST00000517442 172 ntBASIC4.28□□□□□ -1.72
CCSER1Q9C0I3 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.28□□□□□ -1.72
CCSER1Q9C0I3 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC4.28□□□□□ -1.72
CCSER1Q9C0I3 AC092747.2-201ENST00000545069 983 ntBASIC4.28□□□□□ -1.72
CCSER1Q9C0I3 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC4.28□□□□□ -1.72
CCSER1Q9C0I3 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.28□□□□□ -1.72
CCSER1Q9C0I3 AL451086.1-201ENST00000605596 223 ntBASIC4.28□□□□□ -1.72
CCSER1Q9C0I3 BRDTP1-201ENST00000605735 677 ntBASIC4.28□□□□□ -1.72
CCSER1Q9C0I3 SNORA62.6-201ENST00000606322 83 ntBASIC4.28□□□□□ -1.72
CCSER1Q9C0I3 AC004775.1-201ENST00000607389 753 ntBASIC4.28□□□□□ -1.72
CCSER1Q9C0I3 PDCD6IPP1-202ENST00000622242 1064 ntBASIC4.28□□□□□ -1.72
CCSER1Q9C0I3 AC091905.1-201ENST00000624400 311 ntBASIC4.28□□□□□ -1.72
CCSER1Q9C0I3 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CCSER1Q9C0I3 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC4.28□□□□□ -1.72
CCSER1Q9C0I3 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CCSER1Q9C0I3 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
CCSER1Q9C0I3 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCSER1Q9C0I3 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
CCSER1Q9C0I3 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
CCSER1Q9C0I3 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCSER1Q9C0I3 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CCSER1Q9C0I3 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
CCSER1Q9C0I3 RNU6-98P-201ENST00000384173 107 ntBASIC4.27□□□□□ -1.73
CCSER1Q9C0I3 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
CCSER1Q9C0I3 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.27□□□□□ -1.73
CCSER1Q9C0I3 ATP5F1P4-201ENST00000397288 746 ntBASIC4.27□□□□□ -1.73
CCSER1Q9C0I3 SNORA3.3-201ENST00000408712 125 ntBASIC4.27□□□□□ -1.73
CCSER1Q9C0I3 RNU2-65P-201ENST00000410162 185 ntBASIC4.27□□□□□ -1.73
CCSER1Q9C0I3 AC004022.2-201ENST00000413824 193 ntBASIC4.27□□□□□ -1.73
CCSER1Q9C0I3 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.27□□□□□ -1.73
CCSER1Q9C0I3 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.27□□□□□ -1.73
CCSER1Q9C0I3 AC093698.1-201ENST00000423843 571 ntBASIC4.27□□□□□ -1.73
CCSER1Q9C0I3 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.27□□□□□ -1.73
CCSER1Q9C0I3 KCTD10P1-201ENST00000434203 625 ntBASIC4.27□□□□□ -1.73
CCSER1Q9C0I3 RSL24D1P8-201ENST00000434442 492 ntBASIC4.27□□□□□ -1.73
CCSER1Q9C0I3 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC4.27□□□□□ -1.73
CCSER1Q9C0I3 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.27□□□□□ -1.73
CCSER1Q9C0I3 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.27□□□□□ -1.73
CCSER1Q9C0I3 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.27□□□□□ -1.73
CCSER1Q9C0I3 RNA5SP208-201ENST00000516156 78 ntBASIC4.27□□□□□ -1.73
CCSER1Q9C0I3 RNA5SP143-201ENST00000516936 115 ntBASIC4.27□□□□□ -1.73
CCSER1Q9C0I3 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.27□□□□□ -1.73
CCSER1Q9C0I3 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.27□□□□□ -1.73
CCSER1Q9C0I3 AC008562.1-201ENST00000521763 330 ntBASIC4.27□□□□□ -1.73
CCSER1Q9C0I3 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
CCSER1Q9C0I3 AC090751.1-201ENST00000566966 267 ntBASIC4.27□□□□□ -1.73
CCSER1Q9C0I3 AC067852.4-201ENST00000590314 478 ntBASIC4.27□□□□□ -1.73
CCSER1Q9C0I3 AC005255.1-201ENST00000593748 216 ntBASIC4.27□□□□□ -1.73
CCSER1Q9C0I3 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4.27□□□□□ -1.73
CCSER1Q9C0I3 AP003117.1-201ENST00000602771 554 ntBASIC4.27□□□□□ -1.73
CCSER1Q9C0I3 AC083899.3-201ENST00000603413 594 ntBASIC4.27□□□□□ -1.73
CCSER1Q9C0I3 AC135178.6-201ENST00000605314 398 ntBASIC4.27□□□□□ -1.73
CCSER1Q9C0I3 AL109618.2-201ENST00000605527 211 ntBASIC4.27□□□□□ -1.73
CCSER1Q9C0I3 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC4.27□□□□□ -1.73
CCSER1Q9C0I3 FP236240.3-201ENST00000623061 327 ntBASIC4.27□□□□□ -1.73
CCSER1Q9C0I3 AL359715.5-201ENST00000623431 443 ntBASIC4.27□□□□□ -1.73
CCSER1Q9C0I3 MAPK10-372ENST00000641954 3413 ntBASIC4.27□□□□□ -1.73
CCSER1Q9C0I3 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.27□□□□□ -1.73
CCSER1Q9C0I3 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.27□□□□□ -1.73
CCSER1Q9C0I3 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCSER1Q9C0I3 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CCSER1Q9C0I3 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CCSER1Q9C0I3 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.26□□□□□ -1.73
CCSER1Q9C0I3 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
CCSER1Q9C0I3 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.26□□□□□ -1.73
CCSER1Q9C0I3 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCSER1Q9C0I3 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCSER1Q9C0I3 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCSER1Q9C0I3 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCSER1Q9C0I3 RNU1-64P-201ENST00000365443 163 ntBASIC4.26□□□□□ -1.73
CCSER1Q9C0I3 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms