Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 AC015967.1-201ENST00000619893 476 ntBASIC3.85□□□□□ -1.79
TRIM4Q9C037 AP001148.1-201ENST00000624124 2359 ntBASIC3.85□□□□□ -1.79
TRIM4Q9C037 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
TRIM4Q9C037 MTND5P1-201ENST00000445440 1375 ntBASIC3.85□□□□□ -1.79
TRIM4Q9C037 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
TRIM4Q9C037 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.85□□□□□ -1.79
TRIM4Q9C037 CEP170P1-201ENST00000502249 4587 ntBASIC3.84□□□□□ -1.79
TRIM4Q9C037 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
TRIM4Q9C037 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.84□□□□□ -1.79
TRIM4Q9C037 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
TRIM4Q9C037 OR4A15-201ENST00000314706 1035 ntBASIC3.84□□□□□ -1.79
TRIM4Q9C037 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
TRIM4Q9C037 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
TRIM4Q9C037 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.84□□□□□ -1.79
TRIM4Q9C037 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC3.84□□□□□ -1.79
TRIM4Q9C037 SNORA57.3-201ENST00000411095 141 ntBASIC3.84□□□□□ -1.79
TRIM4Q9C037 RNU6-603P-201ENST00000411403 107 ntBASIC3.84□□□□□ -1.79
TRIM4Q9C037 AC098592.2-201ENST00000413158 265 ntBASIC3.84□□□□□ -1.79
TRIM4Q9C037 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.84□□□□□ -1.79
TRIM4Q9C037 AL138785.1-201ENST00000425821 331 ntBASIC3.84□□□□□ -1.79
TRIM4Q9C037 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.84□□□□□ -1.79
TRIM4Q9C037 SKP1P1-201ENST00000438081 489 ntBASIC3.84□□□□□ -1.79
TRIM4Q9C037 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC3.84□□□□□ -1.79
TRIM4Q9C037 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
TRIM4Q9C037 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.84□□□□□ -1.79
TRIM4Q9C037 PDSS1P2-201ENST00000449397 678 ntBASIC3.84□□□□□ -1.79
TRIM4Q9C037 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC3.84□□□□□ -1.79
TRIM4Q9C037 HMGB3P21-201ENST00000452483 547 ntBASIC3.84□□□□□ -1.79
TRIM4Q9C037 DNAJC19P1-201ENST00000455312 319 ntBASIC3.84□□□□□ -1.79
TRIM4Q9C037 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.84□□□□□ -1.79
TRIM4Q9C037 TRBV8-2-201ENST00000475637 270 ntBASIC3.84□□□□□ -1.79
TRIM4Q9C037 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.84□□□□□ -1.79
TRIM4Q9C037 RPS4XP15-201ENST00000489210 795 ntBASIC3.84□□□□□ -1.79
TRIM4Q9C037 AL139099.1-201ENST00000497398 403 ntBASIC3.84□□□□□ -1.79
TRIM4Q9C037 AC006499.5-201ENST00000505037 514 ntBASIC3.84□□□□□ -1.79
TRIM4Q9C037 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
TRIM4Q9C037 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.84□□□□□ -1.79
TRIM4Q9C037 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.84□□□□□ -1.79
TRIM4Q9C037 CYP2C60P-201ENST00000566088 139 ntBASIC3.84□□□□□ -1.79
TRIM4Q9C037 AC022968.1-201ENST00000567372 442 ntBASIC3.84□□□□□ -1.79
TRIM4Q9C037 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.84□□□□□ -1.79
TRIM4Q9C037 AC096586.2-201ENST00000610260 441 ntBASIC3.84□□□□□ -1.79
TRIM4Q9C037 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC3.84□□□□□ -1.79
TRIM4Q9C037 XIST_intron.1-201ENST00000619444 68 ntBASIC3.84□□□□□ -1.79
TRIM4Q9C037 SEPT7P7-201ENST00000420492 1301 ntBASIC3.84□□□□□ -1.79
TRIM4Q9C037 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
TRIM4Q9C037 AC092326.2-201ENST00000624772 1561 ntBASIC3.84□□□□□ -1.8
TRIM4Q9C037 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
TRIM4Q9C037 AC005183.1-201ENST00000603687 1979 ntBASIC3.83□□□□□ -1.8
TRIM4Q9C037 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
TRIM4Q9C037 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
TRIM4Q9C037 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
TRIM4Q9C037 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.83□□□□□ -1.8
TRIM4Q9C037 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
TRIM4Q9C037 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
TRIM4Q9C037 SNORA5A-201ENST00000384111 134 ntBASIC3.83□□□□□ -1.8
TRIM4Q9C037 RNVU1-14-201ENST00000384770 164 ntBASIC3.83□□□□□ -1.8
TRIM4Q9C037 SNORA81-201ENST00000408493 178 ntBASIC3.83□□□□□ -1.8
TRIM4Q9C037 AL691449.1-201ENST00000426570 421 ntBASIC3.83□□□□□ -1.8
TRIM4Q9C037 AC022022.1-201ENST00000430304 178 ntBASIC3.83□□□□□ -1.8
TRIM4Q9C037 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.83□□□□□ -1.8
TRIM4Q9C037 MTND2P2-201ENST00000434633 945 ntBASIC3.83□□□□□ -1.8
TRIM4Q9C037 CLIC4P1-201ENST00000453177 535 ntBASIC3.83□□□□□ -1.8
TRIM4Q9C037 UBE2CP3-201ENST00000502715 450 ntBASIC3.83□□□□□ -1.8
TRIM4Q9C037 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC3.83□□□□□ -1.8
TRIM4Q9C037 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.83□□□□□ -1.8
TRIM4Q9C037 RN7SKP13-201ENST00000515933 244 ntBASIC3.83□□□□□ -1.8
TRIM4Q9C037 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.83□□□□□ -1.8
TRIM4Q9C037 IGKV2D-19-201ENST00000523346 262 ntBASIC3.83□□□□□ -1.8
TRIM4Q9C037 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.83□□□□□ -1.8
TRIM4Q9C037 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
TRIM4Q9C037 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.83□□□□□ -1.8
TRIM4Q9C037 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
TRIM4Q9C037 AC106785.3-201ENST00000564064 847 ntBASIC3.83□□□□□ -1.8
TRIM4Q9C037 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC3.83□□□□□ -1.8
TRIM4Q9C037 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.83□□□□□ -1.8
TRIM4Q9C037 AC005412.1-201ENST00000580812 1049 ntBASIC3.83□□□□□ -1.8
TRIM4Q9C037 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC3.83□□□□□ -1.8
TRIM4Q9C037 MIR5684-201ENST00000585074 65 ntBASIC3.83□□□□□ -1.8
TRIM4Q9C037 AC104662.1-201ENST00000604448 511 ntBASIC3.83□□□□□ -1.8
TRIM4Q9C037 AC090246.1-201ENST00000616499 426 ntBASIC3.83□□□□□ -1.8
TRIM4Q9C037 AC016957.2-201ENST00000616998 848 ntBASIC3.83□□□□□ -1.8
TRIM4Q9C037 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.83□□□□□ -1.8
TRIM4Q9C037 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
TRIM4Q9C037 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
TRIM4Q9C037 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
TRIM4Q9C037 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
TRIM4Q9C037 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.83□□□□□ -1.8
TRIM4Q9C037 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
TRIM4Q9C037 AL139811.1-201ENST00000424779 2299 ntBASIC3.82□□□□□ -1.8
TRIM4Q9C037 CASC19-261ENST00000641853 1638 ntBASIC3.82□□□□□ -1.8
TRIM4Q9C037 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.82□□□□□ -1.8
TRIM4Q9C037 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
TRIM4Q9C037 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
TRIM4Q9C037 AL136131.1-201ENST00000406079 803 ntBASIC3.82□□□□□ -1.8
TRIM4Q9C037 RN7SKP156-201ENST00000410308 342 ntBASIC3.82□□□□□ -1.8
TRIM4Q9C037 RPS29P4-201ENST00000414733 161 ntBASIC3.82□□□□□ -1.8
TRIM4Q9C037 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC3.82□□□□□ -1.8
TRIM4Q9C037 RPS29P31-201ENST00000446147 164 ntBASIC3.82□□□□□ -1.8
TRIM4Q9C037 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 129.6 ms