Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC5.72□□□□□ -1.49
FOXP3Q9BZS1 AC090751.1-201ENST00000566966 267 ntBASIC5.72□□□□□ -1.49
FOXP3Q9BZS1 BNIP3P23-201ENST00000599655 511 ntBASIC5.72□□□□□ -1.49
FOXP3Q9BZS1 AC104695.2-201ENST00000605056 775 ntBASIC5.72□□□□□ -1.49
FOXP3Q9BZS1 DLEU1_2.1-201ENST00000617920 342 ntBASIC5.72□□□□□ -1.49
FOXP3Q9BZS1 AL445264.1-201ENST00000621719 171 ntBASIC5.72□□□□□ -1.49
FOXP3Q9BZS1 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
FOXP3Q9BZS1 OFD1P5Y-201ENST00000447585 2590 ntBASIC5.72□□□□□ -1.49
FOXP3Q9BZS1 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.72□□□□□ -1.49
FOXP3Q9BZS1 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
FOXP3Q9BZS1 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.72□□□□□ -1.49
FOXP3Q9BZS1 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.72□□□□□ -1.49
FOXP3Q9BZS1 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.49
FOXP3Q9BZS1 DDX18P4-201ENST00000511690 1966 ntBASIC5.71□□□□□ -1.49
FOXP3Q9BZS1 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.71□□□□□ -1.5
FOXP3Q9BZS1 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
FOXP3Q9BZS1 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.71□□□□□ -1.5
FOXP3Q9BZS1 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
FOXP3Q9BZS1 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
FOXP3Q9BZS1 OR4A15-201ENST00000314706 1035 ntBASIC5.71□□□□□ -1.5
FOXP3Q9BZS1 GAPDHP24-201ENST00000328713 983 ntBASIC5.71□□□□□ -1.5
FOXP3Q9BZS1 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
FOXP3Q9BZS1 AL159987.1-201ENST00000347911 293 ntBASIC5.71□□□□□ -1.5
FOXP3Q9BZS1 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
FOXP3Q9BZS1 RNA5SP30-201ENST00000365552 115 ntBASIC5.71□□□□□ -1.5
FOXP3Q9BZS1 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
FOXP3Q9BZS1 AL356057.2-201ENST00000403318 432 ntBASIC5.71□□□□□ -1.5
FOXP3Q9BZS1 PPIAP9-201ENST00000403866 498 ntBASIC5.71□□□□□ -1.5
FOXP3Q9BZS1 AL590290.1-201ENST00000405336 380 ntBASIC5.71□□□□□ -1.5
FOXP3Q9BZS1 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC5.71□□□□□ -1.5
FOXP3Q9BZS1 RPS3AP9-201ENST00000417027 792 ntBASIC5.71□□□□□ -1.5
FOXP3Q9BZS1 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.71□□□□□ -1.5
FOXP3Q9BZS1 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC5.71□□□□□ -1.5
FOXP3Q9BZS1 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC5.71□□□□□ -1.5
FOXP3Q9BZS1 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.71□□□□□ -1.5
FOXP3Q9BZS1 AC104850.1-201ENST00000435940 476 ntBASIC5.71□□□□□ -1.5
FOXP3Q9BZS1 AC002504.1-201ENST00000438281 691 ntBASIC5.71□□□□□ -1.5
FOXP3Q9BZS1 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC5.71□□□□□ -1.5
FOXP3Q9BZS1 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC5.71□□□□□ -1.5
FOXP3Q9BZS1 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC5.71□□□□□ -1.5
FOXP3Q9BZS1 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.71□□□□□ -1.5
FOXP3Q9BZS1 EEF1B2P6-201ENST00000445713 673 ntBASIC5.71□□□□□ -1.5
FOXP3Q9BZS1 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC5.71□□□□□ -1.5
FOXP3Q9BZS1 AC018710.1-201ENST00000506509 158 ntBASIC5.71□□□□□ -1.5
FOXP3Q9BZS1 POU5F1P7-201ENST00000508759 541 ntBASIC5.71□□□□□ -1.5
FOXP3Q9BZS1 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.71□□□□□ -1.5
FOXP3Q9BZS1 AC016559.2-201ENST00000510759 359 ntBASIC5.71□□□□□ -1.5
FOXP3Q9BZS1 LRRC34P2-201ENST00000514850 553 ntBASIC5.71□□□□□ -1.5
FOXP3Q9BZS1 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.71□□□□□ -1.5
FOXP3Q9BZS1 Y_RNA.704-201ENST00000516851 102 ntBASIC5.71□□□□□ -1.5
FOXP3Q9BZS1 IGLV3-24-201ENST00000517477 197 ntBASIC5.71□□□□□ -1.5
FOXP3Q9BZS1 IGLV3-30-201ENST00000524362 298 ntBASIC5.71□□□□□ -1.5
FOXP3Q9BZS1 CENPUP1-201ENST00000526649 1202 ntBASIC5.71□□□□□ -1.5
FOXP3Q9BZS1 RGS4-207ENST00000527809 817 ntTSL 4 BASIC5.71□□□□□ -1.5
FOXP3Q9BZS1 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC5.71□□□□□ -1.5
FOXP3Q9BZS1 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC5.71□□□□□ -1.5
FOXP3Q9BZS1 AL512310.1-201ENST00000548639 172 ntBASIC5.71□□□□□ -1.5
FOXP3Q9BZS1 NMNAT1P1-201ENST00000554095 876 ntBASIC5.71□□□□□ -1.5
FOXP3Q9BZS1 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC5.71□□□□□ -1.5
FOXP3Q9BZS1 RN7SL290P-201ENST00000578661 300 ntBASIC5.71□□□□□ -1.5
FOXP3Q9BZS1 MIR4307-201ENST00000582802 84 ntBASIC5.71□□□□□ -1.5
FOXP3Q9BZS1 AC006363.1-201ENST00000603806 463 ntBASIC5.71□□□□□ -1.5
FOXP3Q9BZS1 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.71□□□□□ -1.5
FOXP3Q9BZS1 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.71□□□□□ -1.5
FOXP3Q9BZS1 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
FOXP3Q9BZS1 PACRG-211ENST00000621363 360 ntTSL 5 BASIC5.71□□□□□ -1.5
FOXP3Q9BZS1 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC5.71□□□□□ -1.5
FOXP3Q9BZS1 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
FOXP3Q9BZS1 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC5.71□□□□□ -1.5
FOXP3Q9BZS1 AC006378.2-201ENST00000623178 2476 ntBASIC5.71□□□□□ -1.5
FOXP3Q9BZS1 AC006026.1-201ENST00000444025 1803 ntBASIC5.71□□□□□ -1.5
FOXP3Q9BZS1 AC100757.1-201ENST00000616872 1835 ntBASIC5.71□□□□□ -1.5
FOXP3Q9BZS1 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.71□□□□□ -1.5
FOXP3Q9BZS1 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
FOXP3Q9BZS1 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
FOXP3Q9BZS1 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
FOXP3Q9BZS1 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
FOXP3Q9BZS1 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
FOXP3Q9BZS1 PWAR1-201ENST00000624188 2414 ntBASIC5.7□□□□□ -1.5
FOXP3Q9BZS1 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.7□□□□□ -1.5
FOXP3Q9BZS1 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.7□□□□□ -1.5
FOXP3Q9BZS1 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.7□□□□□ -1.5
FOXP3Q9BZS1 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
FOXP3Q9BZS1 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.7□□□□□ -1.5
FOXP3Q9BZS1 RNA5SP394-201ENST00000364216 119 ntBASIC5.7□□□□□ -1.5
FOXP3Q9BZS1 RNU6-115P-201ENST00000364310 107 ntBASIC5.7□□□□□ -1.5
FOXP3Q9BZS1 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
FOXP3Q9BZS1 RNU6-877P-201ENST00000383868 107 ntBASIC5.7□□□□□ -1.5
FOXP3Q9BZS1 SNORD56.6-201ENST00000384569 71 ntBASIC5.7□□□□□ -1.5
FOXP3Q9BZS1 MIR143-201ENST00000385300 106 ntBASIC5.7□□□□□ -1.5
FOXP3Q9BZS1 AL009179.1-201ENST00000406085 265 ntBASIC5.7□□□□□ -1.5
FOXP3Q9BZS1 Y_RNA.608-201ENST00000410647 95 ntBASIC5.7□□□□□ -1.5
FOXP3Q9BZS1 AC073264.1-201ENST00000411508 416 ntBASIC5.7□□□□□ -1.5
FOXP3Q9BZS1 EEF1A1P40-201ENST00000412883 573 ntBASIC5.7□□□□□ -1.5
FOXP3Q9BZS1 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
FOXP3Q9BZS1 MRPL53P1-201ENST00000414323 319 ntBASIC5.7□□□□□ -1.5
FOXP3Q9BZS1 RBMY2KP-201ENST00000418221 992 ntBASIC5.7□□□□□ -1.5
FOXP3Q9BZS1 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC5.7□□□□□ -1.5
FOXP3Q9BZS1 AL662874.1-201ENST00000426065 230 ntBASIC5.7□□□□□ -1.5
FOXP3Q9BZS1 NPM1P24-201ENST00000428039 894 ntBASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms