Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 TANK-206ENST00000406287 875 ntTSL 5 BASIC4.33□□□□□ -1.72
UPF3BQ9BZI7 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.33□□□□□ -1.72
UPF3BQ9BZI7 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
UPF3BQ9BZI7 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC4.33□□□□□ -1.72
UPF3BQ9BZI7 AL365396.1-201ENST00000430854 671 ntBASIC4.33□□□□□ -1.72
UPF3BQ9BZI7 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.33□□□□□ -1.72
UPF3BQ9BZI7 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.33□□□□□ -1.72
UPF3BQ9BZI7 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC4.33□□□□□ -1.72
UPF3BQ9BZI7 IFNWP4-201ENST00000453148 294 ntBASIC4.33□□□□□ -1.72
UPF3BQ9BZI7 AL354710.1-201ENST00000453641 246 ntBASIC4.33□□□□□ -1.72
UPF3BQ9BZI7 AL133162.1-201ENST00000463228 453 ntBASIC4.33□□□□□ -1.72
UPF3BQ9BZI7 AC084357.1-201ENST00000473404 255 ntBASIC4.33□□□□□ -1.72
UPF3BQ9BZI7 AC022336.1-201ENST00000475510 337 ntBASIC4.33□□□□□ -1.72
UPF3BQ9BZI7 IGHV3-32-201ENST00000519182 355 ntBASIC4.33□□□□□ -1.72
UPF3BQ9BZI7 OR8I1P-201ENST00000529291 931 ntBASIC4.33□□□□□ -1.72
UPF3BQ9BZI7 AC092851.1-201ENST00000535964 478 ntBASIC4.33□□□□□ -1.72
UPF3BQ9BZI7 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC4.33□□□□□ -1.72
UPF3BQ9BZI7 AC005412.1-201ENST00000580812 1049 ntBASIC4.33□□□□□ -1.72
UPF3BQ9BZI7 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC4.33□□□□□ -1.72
UPF3BQ9BZI7 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
UPF3BQ9BZI7 AC010200.2-201ENST00000605098 235 ntBASIC4.33□□□□□ -1.72
UPF3BQ9BZI7 AC110741.2-201ENST00000605278 268 ntBASIC4.33□□□□□ -1.72
UPF3BQ9BZI7 AC092354.2-201ENST00000607786 514 ntBASIC4.33□□□□□ -1.72
UPF3BQ9BZI7 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC4.33□□□□□ -1.72
UPF3BQ9BZI7 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC4.33□□□□□ -1.72
UPF3BQ9BZI7 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
UPF3BQ9BZI7 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
UPF3BQ9BZI7 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
UPF3BQ9BZI7 MIR423-201ENST00000362201 94 ntBASIC4.32□□□□□ -1.72
UPF3BQ9BZI7 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
UPF3BQ9BZI7 SNORA5A-201ENST00000384111 134 ntBASIC4.32□□□□□ -1.72
UPF3BQ9BZI7 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.32□□□□□ -1.72
UPF3BQ9BZI7 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.32□□□□□ -1.72
UPF3BQ9BZI7 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC4.32□□□□□ -1.72
UPF3BQ9BZI7 EXTL2P1-201ENST00000446218 416 ntBASIC4.32□□□□□ -1.72
UPF3BQ9BZI7 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC4.32□□□□□ -1.72
UPF3BQ9BZI7 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.32□□□□□ -1.72
UPF3BQ9BZI7 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC4.32□□□□□ -1.72
UPF3BQ9BZI7 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC4.32□□□□□ -1.72
UPF3BQ9BZI7 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC4.32□□□□□ -1.72
UPF3BQ9BZI7 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC4.32□□□□□ -1.72
UPF3BQ9BZI7 NAT2-202ENST00000520116 716 ntTSL 3 BASIC4.32□□□□□ -1.72
UPF3BQ9BZI7 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC4.32□□□□□ -1.72
UPF3BQ9BZI7 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC4.32□□□□□ -1.72
UPF3BQ9BZI7 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC4.32□□□□□ -1.72
UPF3BQ9BZI7 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC4.32□□□□□ -1.72
UPF3BQ9BZI7 AC016957.2-201ENST00000616998 848 ntBASIC4.32□□□□□ -1.72
UPF3BQ9BZI7 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
UPF3BQ9BZI7 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
UPF3BQ9BZI7 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
UPF3BQ9BZI7 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
UPF3BQ9BZI7 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
UPF3BQ9BZI7 MAPK10-372ENST00000641954 3413 ntBASIC4.31□□□□□ -1.72
UPF3BQ9BZI7 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
UPF3BQ9BZI7 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.31□□□□□ -1.72
UPF3BQ9BZI7 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
UPF3BQ9BZI7 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
UPF3BQ9BZI7 AC007685.1-201ENST00000329806 452 ntBASIC4.31□□□□□ -1.72
UPF3BQ9BZI7 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
UPF3BQ9BZI7 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
UPF3BQ9BZI7 SNORA62.2-201ENST00000364672 152 ntBASIC4.31□□□□□ -1.72
UPF3BQ9BZI7 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
UPF3BQ9BZI7 MTHFD2P2-201ENST00000407725 247 ntBASIC4.31□□□□□ -1.72
UPF3BQ9BZI7 RNU6-603P-201ENST00000411403 107 ntBASIC4.31□□□□□ -1.72
UPF3BQ9BZI7 RHEBP3-201ENST00000411920 351 ntBASIC4.31□□□□□ -1.72
UPF3BQ9BZI7 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.31□□□□□ -1.72
UPF3BQ9BZI7 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC4.31□□□□□ -1.72
UPF3BQ9BZI7 RPS26P40-201ENST00000435209 294 ntBASIC4.31□□□□□ -1.72
UPF3BQ9BZI7 AC092013.1-201ENST00000438795 332 ntBASIC4.31□□□□□ -1.72
UPF3BQ9BZI7 CYCSP32-201ENST00000440548 321 ntBASIC4.31□□□□□ -1.72
UPF3BQ9BZI7 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC4.31□□□□□ -1.72
UPF3BQ9BZI7 RPS20P21-201ENST00000466859 343 ntBASIC4.31□□□□□ -1.72
UPF3BQ9BZI7 AC006511.1-201ENST00000470614 315 ntBASIC4.31□□□□□ -1.72
UPF3BQ9BZI7 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC4.31□□□□□ -1.72
UPF3BQ9BZI7 AC068305.1-201ENST00000497406 726 ntBASIC4.31□□□□□ -1.72
UPF3BQ9BZI7 USP9YP5-201ENST00000511770 630 ntBASIC4.31□□□□□ -1.72
UPF3BQ9BZI7 IGKV2D-23-201ENST00000518179 286 ntBASIC4.31□□□□□ -1.72
UPF3BQ9BZI7 IGKV2D-19-201ENST00000523346 262 ntBASIC4.31□□□□□ -1.72
UPF3BQ9BZI7 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC4.31□□□□□ -1.72
UPF3BQ9BZI7 AC084757.1-201ENST00000559987 490 ntBASIC4.31□□□□□ -1.72
UPF3BQ9BZI7 CYP2C60P-201ENST00000566088 139 ntBASIC4.31□□□□□ -1.72
UPF3BQ9BZI7 AC005000.2-201ENST00000605468 310 ntBASIC4.31□□□□□ -1.72
UPF3BQ9BZI7 U3.45-201ENST00000607547 219 ntBASIC4.31□□□□□ -1.72
UPF3BQ9BZI7 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC4.31□□□□□ -1.72
UPF3BQ9BZI7 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.31□□□□□ -1.72
UPF3BQ9BZI7 AC119674.1-207ENST00000641355 633 ntBASIC4.31□□□□□ -1.72
UPF3BQ9BZI7 AL732372.2-225ENST00000642124 456 ntBASIC4.31□□□□□ -1.72
UPF3BQ9BZI7 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.31□□□□□ -1.72
UPF3BQ9BZI7 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.31□□□□□ -1.72
UPF3BQ9BZI7 AC007342.7-201ENST00000624610 2337 ntBASIC4.3□□□□□ -1.72
UPF3BQ9BZI7 TMEM161BP1-201ENST00000457388 1457 ntBASIC4.3□□□□□ -1.72
UPF3BQ9BZI7 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC4.3□□□□□ -1.72
UPF3BQ9BZI7 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
UPF3BQ9BZI7 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
UPF3BQ9BZI7 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
UPF3BQ9BZI7 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
UPF3BQ9BZI7 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
UPF3BQ9BZI7 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
UPF3BQ9BZI7 RNU6-146P-201ENST00000384602 108 ntBASIC4.3□□□□□ -1.72
UPF3BQ9BZI7 U8.11-201ENST00000384699 133 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms