Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 AL139413.1-201ENST00000421309 217 ntBASIC5.53□□□□□ -1.52
IFT140Q96RY7 ATP5HP2-201ENST00000433885 485 ntBASIC5.53□□□□□ -1.52
IFT140Q96RY7 AC092809.1-201ENST00000441469 474 ntBASIC5.53□□□□□ -1.52
IFT140Q96RY7 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC5.53□□□□□ -1.52
IFT140Q96RY7 AL035404.1-201ENST00000497982 568 ntBASIC5.53□□□□□ -1.52
IFT140Q96RY7 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.53□□□□□ -1.52
IFT140Q96RY7 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
IFT140Q96RY7 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
IFT140Q96RY7 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC5.53□□□□□ -1.52
IFT140Q96RY7 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.52□□□□□ -1.53
IFT140Q96RY7 AC062016.1-201ENST00000355719 319 ntBASIC5.52□□□□□ -1.53
IFT140Q96RY7 IL6-203ENST00000401651 539 ntTSL 2 BASIC5.52□□□□□ -1.53
IFT140Q96RY7 MIR1261-201ENST00000408659 82 ntBASIC5.52□□□□□ -1.53
IFT140Q96RY7 RPS29P26-201ENST00000477483 171 ntBASIC5.52□□□□□ -1.53
IFT140Q96RY7 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC5.52□□□□□ -1.53
IFT140Q96RY7 TCP11X3P-202ENST00000514289 1254 ntBASIC5.52□□□□□ -1.53
IFT140Q96RY7 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC5.52□□□□□ -1.53
IFT140Q96RY7 AC008489.1-201ENST00000524271 483 ntBASIC5.52□□□□□ -1.53
IFT140Q96RY7 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC5.52□□□□□ -1.53
IFT140Q96RY7 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC5.52□□□□□ -1.53
IFT140Q96RY7 AC020914.4-201ENST00000597690 277 ntBASIC5.52□□□□□ -1.53
IFT140Q96RY7 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC5.52□□□□□ -1.53
IFT140Q96RY7 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
IFT140Q96RY7 AC092435.4-201ENST00000623012 4159 ntBASIC5.52□□□□□ -1.53
IFT140Q96RY7 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
IFT140Q96RY7 RNU1-70P-201ENST00000362618 164 ntBASIC5.51□□□□□ -1.53
IFT140Q96RY7 RNA5SP229-201ENST00000410809 99 ntBASIC5.51□□□□□ -1.53
IFT140Q96RY7 EIF4EP1-201ENST00000422311 642 ntBASIC5.51□□□□□ -1.53
IFT140Q96RY7 ELOCP8-201ENST00000439309 332 ntBASIC5.51□□□□□ -1.53
IFT140Q96RY7 ELOCP15-201ENST00000442090 332 ntBASIC5.51□□□□□ -1.53
IFT140Q96RY7 TEX41-209ENST00000451478 452 ntTSL 2 BASIC5.51□□□□□ -1.53
IFT140Q96RY7 NPM1P13-201ENST00000452663 865 ntBASIC5.51□□□□□ -1.53
IFT140Q96RY7 AC005242.1-201ENST00000585658 438 ntBASIC5.51□□□□□ -1.53
IFT140Q96RY7 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC5.51□□□□□ -1.53
IFT140Q96RY7 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
IFT140Q96RY7 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
IFT140Q96RY7 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
IFT140Q96RY7 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
IFT140Q96RY7 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
IFT140Q96RY7 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
IFT140Q96RY7 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC5.51□□□□□ -1.53
IFT140Q96RY7 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC5.51□□□□□ -1.53
IFT140Q96RY7 RMST-202ENST00000541282 2099 ntTSL 2 BASIC5.51□□□□□ -1.53
IFT140Q96RY7 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.51□□□□□ -1.53
IFT140Q96RY7 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.51□□□□□ -1.53
IFT140Q96RY7 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC5.51□□□□□ -1.53
IFT140Q96RY7 Z99755.1-201ENST00000414048 380 ntBASIC5.51□□□□□ -1.53
IFT140Q96RY7 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC5.51□□□□□ -1.53
IFT140Q96RY7 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC5.51□□□□□ -1.53
IFT140Q96RY7 AC006518.1-201ENST00000541449 943 ntBASIC5.51□□□□□ -1.53
IFT140Q96RY7 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC5.51□□□□□ -1.53
IFT140Q96RY7 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
IFT140Q96RY7 OSBPL9P4-201ENST00000371707 1800 ntBASIC5.5□□□□□ -1.53
IFT140Q96RY7 RIOK3P1-201ENST00000418778 1528 ntBASIC5.5□□□□□ -1.53
IFT140Q96RY7 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
IFT140Q96RY7 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
IFT140Q96RY7 RNU4-82P-201ENST00000362443 140 ntBASIC5.5□□□□□ -1.53
IFT140Q96RY7 RN7SKP199-201ENST00000410325 305 ntBASIC5.5□□□□□ -1.53
IFT140Q96RY7 MTND4P22-201ENST00000413116 1169 ntBASIC5.5□□□□□ -1.53
IFT140Q96RY7 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC5.5□□□□□ -1.53
IFT140Q96RY7 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC5.5□□□□□ -1.53
IFT140Q96RY7 RNF148-202ENST00000447240 839 ntTSL 2 BASIC5.5□□□□□ -1.53
IFT140Q96RY7 BX276092.4-201ENST00000452056 248 ntBASIC5.5□□□□□ -1.53
IFT140Q96RY7 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC5.5□□□□□ -1.53
IFT140Q96RY7 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC5.5□□□□□ -1.53
IFT140Q96RY7 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
IFT140Q96RY7 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC5.5□□□□□ -1.53
IFT140Q96RY7 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC5.5□□□□□ -1.53
IFT140Q96RY7 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC5.5□□□□□ -1.53
IFT140Q96RY7 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC5.5□□□□□ -1.53
IFT140Q96RY7 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
IFT140Q96RY7 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
IFT140Q96RY7 AC020633.1-201ENST00000468439 2247 ntBASIC5.49□□□□□ -1.53
IFT140Q96RY7 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
IFT140Q96RY7 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.49□□□□□ -1.53
IFT140Q96RY7 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
IFT140Q96RY7 AL445529.1-201ENST00000398713 389 ntBASIC5.49□□□□□ -1.53
IFT140Q96RY7 MRPS18BP2-201ENST00000434310 759 ntBASIC5.49□□□□□ -1.53
IFT140Q96RY7 AL133477.1-201ENST00000457472 514 ntBASIC5.49□□□□□ -1.53
IFT140Q96RY7 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC5.49□□□□□ -1.53
IFT140Q96RY7 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.49□□□□□ -1.53
IFT140Q96RY7 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC5.49□□□□□ -1.53
IFT140Q96RY7 MIR2682-201ENST00000580305 110 ntBASIC5.49□□□□□ -1.53
IFT140Q96RY7 OR7M1P-201ENST00000608946 533 ntBASIC5.49□□□□□ -1.53
IFT140Q96RY7 AC245100.7-201ENST00000609678 442 ntBASIC5.49□□□□□ -1.53
IFT140Q96RY7 AL157817.1-201ENST00000614264 790 ntBASIC5.49□□□□□ -1.53
IFT140Q96RY7 AL450472.3-201ENST00000615578 367 ntBASIC5.49□□□□□ -1.53
IFT140Q96RY7 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC5.49□□□□□ -1.53
IFT140Q96RY7 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
IFT140Q96RY7 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
IFT140Q96RY7 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
IFT140Q96RY7 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
IFT140Q96RY7 AL136360.1-201ENST00000503377 1900 ntBASIC5.48□□□□□ -1.53
IFT140Q96RY7 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
IFT140Q96RY7 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC5.48□□□□□ -1.53
IFT140Q96RY7 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
IFT140Q96RY7 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.48□□□□□ -1.53
IFT140Q96RY7 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC5.48□□□□□ -1.53
IFT140Q96RY7 NUP35P1-201ENST00000422734 947 ntBASIC5.48□□□□□ -1.53
IFT140Q96RY7 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms