Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 AL607023.1-201ENST00000620045 248 ntBASIC5.28□□□□□ -1.56
CDK5RAP3Q96JB5 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
CDK5RAP3Q96JB5 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CDK5RAP3Q96JB5 AC068137.4-201ENST00000638485 296 ntBASIC5.28□□□□□ -1.56
CDK5RAP3Q96JB5 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CDK5RAP3Q96JB5 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC5.28□□□□□ -1.56
CDK5RAP3Q96JB5 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
CDK5RAP3Q96JB5 AC027290.2-201ENST00000623210 18662 ntBASIC5.28□□□□□ -1.56
CDK5RAP3Q96JB5 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CDK5RAP3Q96JB5 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CDK5RAP3Q96JB5 Z98755.1-201ENST00000407015 1384 ntBASIC5.28□□□□□ -1.56
CDK5RAP3Q96JB5 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CDK5RAP3Q96JB5 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CDK5RAP3Q96JB5 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.27□□□□□ -1.57
CDK5RAP3Q96JB5 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC5.27□□□□□ -1.57
CDK5RAP3Q96JB5 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
CDK5RAP3Q96JB5 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CDK5RAP3Q96JB5 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CDK5RAP3Q96JB5 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CDK5RAP3Q96JB5 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC5.27□□□□□ -1.57
CDK5RAP3Q96JB5 RNU1-83P-201ENST00000363426 164 ntBASIC5.27□□□□□ -1.57
CDK5RAP3Q96JB5 RNU6-1200P-201ENST00000384162 107 ntBASIC5.27□□□□□ -1.57
CDK5RAP3Q96JB5 MIR550A3-201ENST00000390735 95 ntBASIC5.27□□□□□ -1.57
CDK5RAP3Q96JB5 AGR3-202ENST00000402239 563 ntTSL 2 BASIC5.27□□□□□ -1.57
CDK5RAP3Q96JB5 Z98745.1-201ENST00000402553 494 ntBASIC5.27□□□□□ -1.57
CDK5RAP3Q96JB5 AL136133.1-201ENST00000413694 376 ntBASIC5.27□□□□□ -1.57
CDK5RAP3Q96JB5 PRELID3BP11-201ENST00000414230 479 ntBASIC5.27□□□□□ -1.57
CDK5RAP3Q96JB5 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CDK5RAP3Q96JB5 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CDK5RAP3Q96JB5 FABP7P1-201ENST00000424004 391 ntBASIC5.27□□□□□ -1.57
CDK5RAP3Q96JB5 AL590762.4-201ENST00000425885 253 ntBASIC5.27□□□□□ -1.57
CDK5RAP3Q96JB5 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC5.27□□□□□ -1.57
CDK5RAP3Q96JB5 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC5.27□□□□□ -1.57
CDK5RAP3Q96JB5 RPS27P18-201ENST00000431701 247 ntBASIC5.27□□□□□ -1.57
CDK5RAP3Q96JB5 TEX41-205ENST00000431734 529 ntTSL 4 BASIC5.27□□□□□ -1.57
CDK5RAP3Q96JB5 RPL37P1-201ENST00000432310 284 ntBASIC5.27□□□□□ -1.57
CDK5RAP3Q96JB5 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
CDK5RAP3Q96JB5 RPS26P2-201ENST00000440331 348 ntBASIC5.27□□□□□ -1.57
CDK5RAP3Q96JB5 ARL4AP3-201ENST00000441452 574 ntBASIC5.27□□□□□ -1.57
CDK5RAP3Q96JB5 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CDK5RAP3Q96JB5 NDUFA5P7-201ENST00000452914 242 ntBASIC5.27□□□□□ -1.57
CDK5RAP3Q96JB5 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC5.27□□□□□ -1.57
CDK5RAP3Q96JB5 ANK3-207ENST00000460468 677 ntTSL 3 BASIC5.27□□□□□ -1.57
CDK5RAP3Q96JB5 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC5.27□□□□□ -1.57
CDK5RAP3Q96JB5 ACTG1P13-201ENST00000486987 1043 ntBASIC5.27□□□□□ -1.57
CDK5RAP3Q96JB5 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC5.27□□□□□ -1.57
CDK5RAP3Q96JB5 AC111000.2-201ENST00000507775 550 ntBASIC5.27□□□□□ -1.57
CDK5RAP3Q96JB5 MTND1P22-201ENST00000510572 951 ntBASIC5.27□□□□□ -1.57
CDK5RAP3Q96JB5 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CDK5RAP3Q96JB5 RNU6-202P-201ENST00000515998 96 ntBASIC5.27□□□□□ -1.57
CDK5RAP3Q96JB5 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC5.27□□□□□ -1.57
CDK5RAP3Q96JB5 MTCO1P49-201ENST00000523429 802 ntBASIC5.27□□□□□ -1.57
CDK5RAP3Q96JB5 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC5.27□□□□□ -1.57
CDK5RAP3Q96JB5 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC5.27□□□□□ -1.57
CDK5RAP3Q96JB5 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC5.27□□□□□ -1.57
CDK5RAP3Q96JB5 UBE2FP2-201ENST00000566646 462 ntBASIC5.27□□□□□ -1.57
CDK5RAP3Q96JB5 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC5.27□□□□□ -1.57
CDK5RAP3Q96JB5 AC138915.2-201ENST00000569776 97 ntBASIC5.27□□□□□ -1.57
CDK5RAP3Q96JB5 RN7SL652P-201ENST00000577769 300 ntBASIC5.27□□□□□ -1.57
CDK5RAP3Q96JB5 AC091042.1-201ENST00000579213 173 ntBASIC5.27□□□□□ -1.57
CDK5RAP3Q96JB5 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC5.27□□□□□ -1.57
CDK5RAP3Q96JB5 MIR4737-201ENST00000583979 81 ntBASIC5.27□□□□□ -1.57
CDK5RAP3Q96JB5 AL354760.1-201ENST00000608357 643 ntBASIC5.27□□□□□ -1.57
CDK5RAP3Q96JB5 AC097505.1-201ENST00000610199 565 ntBASIC5.27□□□□□ -1.57
CDK5RAP3Q96JB5 AC005332.6-201ENST00000613178 446 ntBASIC5.27□□□□□ -1.57
CDK5RAP3Q96JB5 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
CDK5RAP3Q96JB5 AC015871.5-202ENST00000623252 701 ntBASIC5.27□□□□□ -1.57
CDK5RAP3Q96JB5 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CDK5RAP3Q96JB5 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CDK5RAP3Q96JB5 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.27□□□□□ -1.57
CDK5RAP3Q96JB5 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
CDK5RAP3Q96JB5 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CDK5RAP3Q96JB5 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.26□□□□□ -1.57
CDK5RAP3Q96JB5 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CDK5RAP3Q96JB5 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CDK5RAP3Q96JB5 ARHGAP42P3-201ENST00000443989 2508 ntBASIC5.26□□□□□ -1.57
CDK5RAP3Q96JB5 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC5.26□□□□□ -1.57
CDK5RAP3Q96JB5 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CDK5RAP3Q96JB5 HNRNPDP2-201ENST00000406475 478 ntBASIC5.26□□□□□ -1.57
CDK5RAP3Q96JB5 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC5.26□□□□□ -1.57
CDK5RAP3Q96JB5 P2RY10P2-201ENST00000416730 913 ntBASIC5.26□□□□□ -1.57
CDK5RAP3Q96JB5 FABP7P2-201ENST00000429946 379 ntBASIC5.26□□□□□ -1.57
CDK5RAP3Q96JB5 AL513175.1-201ENST00000431492 780 ntBASIC5.26□□□□□ -1.57
CDK5RAP3Q96JB5 AC005154.2-201ENST00000438110 379 ntBASIC5.26□□□□□ -1.57
CDK5RAP3Q96JB5 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC5.26□□□□□ -1.57
CDK5RAP3Q96JB5 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.26□□□□□ -1.57
CDK5RAP3Q96JB5 AL606662.1-201ENST00000445763 553 ntBASIC5.26□□□□□ -1.57
CDK5RAP3Q96JB5 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC5.26□□□□□ -1.57
CDK5RAP3Q96JB5 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC5.26□□□□□ -1.57
CDK5RAP3Q96JB5 NF1P3-201ENST00000457709 450 ntBASIC5.26□□□□□ -1.57
CDK5RAP3Q96JB5 RPL5P30-201ENST00000465511 891 ntBASIC5.26□□□□□ -1.57
CDK5RAP3Q96JB5 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC5.26□□□□□ -1.57
CDK5RAP3Q96JB5 MTND3P7-201ENST00000474435 343 ntBASIC5.26□□□□□ -1.57
CDK5RAP3Q96JB5 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC5.26□□□□□ -1.57
CDK5RAP3Q96JB5 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC5.26□□□□□ -1.57
CDK5RAP3Q96JB5 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC5.26□□□□□ -1.57
CDK5RAP3Q96JB5 AC090819.1-201ENST00000523800 1111 ntBASIC5.26□□□□□ -1.57
CDK5RAP3Q96JB5 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC5.26□□□□□ -1.57
CDK5RAP3Q96JB5 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC5.26□□□□□ -1.57
CDK5RAP3Q96JB5 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms