Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 AL121978.1-201ENST00000402778 359 ntBASIC5.59□□□□□ -1.51
CHMP4CQ96CF2 MTCO3P31-201ENST00000405526 789 ntBASIC5.59□□□□□ -1.51
CHMP4CQ96CF2 AL080315.1-201ENST00000406055 466 ntBASIC5.59□□□□□ -1.51
CHMP4CQ96CF2 AC016397.1-201ENST00000412463 242 ntBASIC5.59□□□□□ -1.51
CHMP4CQ96CF2 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC5.59□□□□□ -1.51
CHMP4CQ96CF2 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CHMP4CQ96CF2 FCF1P2-201ENST00000415284 583 ntBASIC5.59□□□□□ -1.51
CHMP4CQ96CF2 AC008280.1-201ENST00000418851 412 ntBASIC5.59□□□□□ -1.51
CHMP4CQ96CF2 MTCO3P1-205ENST00000422088 832 ntBASIC5.59□□□□□ -1.51
CHMP4CQ96CF2 IPMKP1-201ENST00000425988 855 ntBASIC5.59□□□□□ -1.51
CHMP4CQ96CF2 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC5.59□□□□□ -1.51
CHMP4CQ96CF2 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC5.59□□□□□ -1.51
CHMP4CQ96CF2 AL050321.1-201ENST00000432363 400 ntBASIC5.59□□□□□ -1.51
CHMP4CQ96CF2 AL450263.2-201ENST00000439400 589 ntBASIC5.59□□□□□ -1.51
CHMP4CQ96CF2 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC5.59□□□□□ -1.51
CHMP4CQ96CF2 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC5.59□□□□□ -1.51
CHMP4CQ96CF2 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC5.59□□□□□ -1.51
CHMP4CQ96CF2 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC5.59□□□□□ -1.51
CHMP4CQ96CF2 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC5.59□□□□□ -1.51
CHMP4CQ96CF2 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC5.59□□□□□ -1.51
CHMP4CQ96CF2 ART2BP-201ENST00000453501 499 ntBASIC5.59□□□□□ -1.51
CHMP4CQ96CF2 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
CHMP4CQ96CF2 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC5.59□□□□□ -1.51
CHMP4CQ96CF2 AC010683.1-201ENST00000473673 378 ntBASIC5.59□□□□□ -1.51
CHMP4CQ96CF2 FTH1P24-201ENST00000503502 462 ntBASIC5.59□□□□□ -1.51
CHMP4CQ96CF2 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC5.59□□□□□ -1.51
CHMP4CQ96CF2 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CHMP4CQ96CF2 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC5.59□□□□□ -1.51
CHMP4CQ96CF2 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC5.59□□□□□ -1.51
CHMP4CQ96CF2 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CHMP4CQ96CF2 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC5.59□□□□□ -1.51
CHMP4CQ96CF2 MIR5699-201ENST00000578903 90 ntBASIC5.59□□□□□ -1.51
CHMP4CQ96CF2 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC5.59□□□□□ -1.51
CHMP4CQ96CF2 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC5.59□□□□□ -1.51
CHMP4CQ96CF2 AC073091.2-201ENST00000603205 907 ntBASIC5.59□□□□□ -1.51
CHMP4CQ96CF2 AC093765.1-201ENST00000603758 881 ntBASIC5.59□□□□□ -1.51
CHMP4CQ96CF2 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CHMP4CQ96CF2 AL450489.1-201ENST00000612071 468 ntBASIC5.59□□□□□ -1.51
CHMP4CQ96CF2 AC009318.3-201ENST00000616916 503 ntBASIC5.59□□□□□ -1.51
CHMP4CQ96CF2 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC5.59□□□□□ -1.51
CHMP4CQ96CF2 AC073348.1-201ENST00000623002 331 ntBASIC5.59□□□□□ -1.51
CHMP4CQ96CF2 AC015908.5-201ENST00000623289 343 ntBASIC5.59□□□□□ -1.51
CHMP4CQ96CF2 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC5.59□□□□□ -1.51
CHMP4CQ96CF2 MKKS-204ENST00000639674 192 ntBASIC5.59□□□□□ -1.51
CHMP4CQ96CF2 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CHMP4CQ96CF2 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.59□□□□□ -1.51
CHMP4CQ96CF2 AC093535.2-201ENST00000624769 2326 ntBASIC5.59□□□□□ -1.51
CHMP4CQ96CF2 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.52
CHMP4CQ96CF2 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC5.59□□□□□ -1.52
CHMP4CQ96CF2 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
CHMP4CQ96CF2 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC5.58□□□□□ -1.52
CHMP4CQ96CF2 AC107081.3-201ENST00000612715 2034 ntBASIC5.58□□□□□ -1.52
CHMP4CQ96CF2 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CHMP4CQ96CF2 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.58□□□□□ -1.52
CHMP4CQ96CF2 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CHMP4CQ96CF2 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC5.58□□□□□ -1.52
CHMP4CQ96CF2 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
CHMP4CQ96CF2 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
CHMP4CQ96CF2 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC5.58□□□□□ -1.52
CHMP4CQ96CF2 AC107982.1-201ENST00000507171 1300 ntBASIC5.58□□□□□ -1.52
CHMP4CQ96CF2 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
CHMP4CQ96CF2 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
CHMP4CQ96CF2 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
CHMP4CQ96CF2 MIR192-201ENST00000384915 110 ntBASIC5.58□□□□□ -1.52
CHMP4CQ96CF2 MIR141-201ENST00000384975 95 ntBASIC5.58□□□□□ -1.52
CHMP4CQ96CF2 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
CHMP4CQ96CF2 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC5.58□□□□□ -1.52
CHMP4CQ96CF2 AL590139.1-201ENST00000416267 400 ntBASIC5.58□□□□□ -1.52
CHMP4CQ96CF2 MFSD13B-201ENST00000420133 1290 ntBASIC5.58□□□□□ -1.52
CHMP4CQ96CF2 RPL12P34-201ENST00000424532 479 ntBASIC5.58□□□□□ -1.52
CHMP4CQ96CF2 AC023347.2-201ENST00000433994 462 ntBASIC5.58□□□□□ -1.52
CHMP4CQ96CF2 RPL12P46-201ENST00000436610 195 ntBASIC5.58□□□□□ -1.52
CHMP4CQ96CF2 TPT1P13-201ENST00000449760 499 ntBASIC5.58□□□□□ -1.52
CHMP4CQ96CF2 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC5.58□□□□□ -1.52
CHMP4CQ96CF2 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC5.58□□□□□ -1.52
CHMP4CQ96CF2 AC108022.1-201ENST00000493466 478 ntBASIC5.58□□□□□ -1.52
CHMP4CQ96CF2 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC5.58□□□□□ -1.52
CHMP4CQ96CF2 KRT19P6-201ENST00000510983 209 ntBASIC5.58□□□□□ -1.52
CHMP4CQ96CF2 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC5.58□□□□□ -1.52
CHMP4CQ96CF2 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC5.58□□□□□ -1.52
CHMP4CQ96CF2 MRPS33P3-201ENST00000513456 322 ntBASIC5.58□□□□□ -1.52
CHMP4CQ96CF2 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC5.58□□□□□ -1.52
CHMP4CQ96CF2 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC5.58□□□□□ -1.52
CHMP4CQ96CF2 CA1-215ENST00000522389 551 ntTSL 3 BASIC5.58□□□□□ -1.52
CHMP4CQ96CF2 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.58□□□□□ -1.52
CHMP4CQ96CF2 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC5.58□□□□□ -1.52
CHMP4CQ96CF2 FKBP1BP1-201ENST00000553366 325 ntBASIC5.58□□□□□ -1.52
CHMP4CQ96CF2 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC5.58□□□□□ -1.52
CHMP4CQ96CF2 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC5.58□□□□□ -1.52
CHMP4CQ96CF2 AC002400.1-201ENST00000569310 726 ntBASIC5.58□□□□□ -1.52
CHMP4CQ96CF2 AC138915.2-201ENST00000569776 97 ntBASIC5.58□□□□□ -1.52
CHMP4CQ96CF2 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC5.58□□□□□ -1.52
CHMP4CQ96CF2 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC5.58□□□□□ -1.52
CHMP4CQ96CF2 VIS1.1-201ENST00000610517 203 ntBASIC5.58□□□□□ -1.52
CHMP4CQ96CF2 AC067852.7-201ENST00000623270 535 ntBASIC5.58□□□□□ -1.52
CHMP4CQ96CF2 AC026634.1-201ENST00000634369 198 ntBASIC5.58□□□□□ -1.52
CHMP4CQ96CF2 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CHMP4CQ96CF2 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC5.58□□□□□ -1.52
CHMP4CQ96CF2 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CHMP4CQ96CF2 AC015813.6-201ENST00000624409 5808 ntBASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms