Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.21□□□□□ -1.74
VPS33AQ96AX1 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC4.21□□□□□ -1.74
VPS33AQ96AX1 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.21□□□□□ -1.74
VPS33AQ96AX1 IGLV2-28-201ENST00000520681 304 ntBASIC4.21□□□□□ -1.74
VPS33AQ96AX1 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.21□□□□□ -1.74
VPS33AQ96AX1 PHBP17-201ENST00000528576 541 ntBASIC4.21□□□□□ -1.74
VPS33AQ96AX1 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC4.21□□□□□ -1.74
VPS33AQ96AX1 EDDM3DP-201ENST00000554692 434 ntBASIC4.21□□□□□ -1.74
VPS33AQ96AX1 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
VPS33AQ96AX1 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC4.21□□□□□ -1.74
VPS33AQ96AX1 AL158050.2-201ENST00000605336 568 ntBASIC4.21□□□□□ -1.74
VPS33AQ96AX1 AC133644.2-201ENST00000608142 540 ntBASIC4.21□□□□□ -1.74
VPS33AQ96AX1 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.21□□□□□ -1.74
VPS33AQ96AX1 AC104985.3-201ENST00000623479 597 ntBASIC4.21□□□□□ -1.74
VPS33AQ96AX1 AC026634.1-201ENST00000634369 198 ntBASIC4.21□□□□□ -1.74
VPS33AQ96AX1 MFSD8-245ENST00000641743 948 ntBASIC4.21□□□□□ -1.74
VPS33AQ96AX1 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
VPS33AQ96AX1 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
VPS33AQ96AX1 FER-202ENST00000438717 1531 ntTSL 2 BASIC4.21□□□□□ -1.74
VPS33AQ96AX1 CIR1P2-201ENST00000514821 1342 ntBASIC4.21□□□□□ -1.74
VPS33AQ96AX1 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
VPS33AQ96AX1 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
VPS33AQ96AX1 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
VPS33AQ96AX1 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.2□□□□□ -1.74
VPS33AQ96AX1 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
VPS33AQ96AX1 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
VPS33AQ96AX1 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
VPS33AQ96AX1 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
VPS33AQ96AX1 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
VPS33AQ96AX1 MIR3074-201ENST00000384885 81 ntBASIC4.2□□□□□ -1.74
VPS33AQ96AX1 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
VPS33AQ96AX1 SDHCP2-201ENST00000398565 501 ntBASIC4.2□□□□□ -1.74
VPS33AQ96AX1 AL133264.1-201ENST00000407157 562 ntBASIC4.2□□□□□ -1.74
VPS33AQ96AX1 OFD1P18Y-201ENST00000420889 959 ntBASIC4.2□□□□□ -1.74
VPS33AQ96AX1 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.2□□□□□ -1.74
VPS33AQ96AX1 RPS27AP12-201ENST00000429552 465 ntBASIC4.2□□□□□ -1.74
VPS33AQ96AX1 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.2□□□□□ -1.74
VPS33AQ96AX1 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
VPS33AQ96AX1 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC4.2□□□□□ -1.74
VPS33AQ96AX1 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.2□□□□□ -1.74
VPS33AQ96AX1 ABCF2P2-201ENST00000450549 296 ntBASIC4.2□□□□□ -1.74
VPS33AQ96AX1 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.2□□□□□ -1.74
VPS33AQ96AX1 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.2□□□□□ -1.74
VPS33AQ96AX1 HMGB3P30-201ENST00000457863 606 ntBASIC4.2□□□□□ -1.74
VPS33AQ96AX1 AP000873.1-201ENST00000463987 400 ntBASIC4.2□□□□□ -1.74
VPS33AQ96AX1 AC004453.1-201ENST00000487895 408 ntBASIC4.2□□□□□ -1.74
VPS33AQ96AX1 RPL5P23-201ENST00000496040 868 ntBASIC4.2□□□□□ -1.74
VPS33AQ96AX1 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.2□□□□□ -1.74
VPS33AQ96AX1 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC4.2□□□□□ -1.74
VPS33AQ96AX1 AC005798.1-201ENST00000513715 387 ntBASIC4.2□□□□□ -1.74
VPS33AQ96AX1 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.2□□□□□ -1.74
VPS33AQ96AX1 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC4.2□□□□□ -1.74
VPS33AQ96AX1 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.2□□□□□ -1.74
VPS33AQ96AX1 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC4.2□□□□□ -1.74
VPS33AQ96AX1 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC4.2□□□□□ -1.74
VPS33AQ96AX1 MTCYBP27-201ENST00000555160 670 ntBASIC4.2□□□□□ -1.74
VPS33AQ96AX1 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC4.2□□□□□ -1.74
VPS33AQ96AX1 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC4.2□□□□□ -1.74
VPS33AQ96AX1 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
VPS33AQ96AX1 MIR4737-201ENST00000583979 81 ntBASIC4.2□□□□□ -1.74
VPS33AQ96AX1 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
VPS33AQ96AX1 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC4.2□□□□□ -1.74
VPS33AQ96AX1 AL139022.2-201ENST00000606934 443 ntBASIC4.2□□□□□ -1.74
VPS33AQ96AX1 U73479.1-201ENST00000618062 168 ntBASIC4.2□□□□□ -1.74
VPS33AQ96AX1 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.2□□□□□ -1.74
VPS33AQ96AX1 ZNF734P-201ENST00000419494 1534 ntBASIC4.2□□□□□ -1.74
VPS33AQ96AX1 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
VPS33AQ96AX1 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
VPS33AQ96AX1 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
VPS33AQ96AX1 AC000367.1-201ENST00000452711 1766 ntBASIC4.19□□□□□ -1.74
VPS33AQ96AX1 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.19□□□□□ -1.74
VPS33AQ96AX1 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC4.19□□□□□ -1.74
VPS33AQ96AX1 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.19□□□□□ -1.74
VPS33AQ96AX1 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.19□□□□□ -1.74
VPS33AQ96AX1 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
VPS33AQ96AX1 AC005261.4-201ENST00000600047 1385 ntBASIC4.19□□□□□ -1.74
VPS33AQ96AX1 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
VPS33AQ96AX1 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.19□□□□□ -1.74
VPS33AQ96AX1 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.19□□□□□ -1.74
VPS33AQ96AX1 XIAPP3-201ENST00000312918 795 ntBASIC4.19□□□□□ -1.74
VPS33AQ96AX1 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
VPS33AQ96AX1 RNU6-707P-201ENST00000364647 95 ntBASIC4.19□□□□□ -1.74
VPS33AQ96AX1 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.19□□□□□ -1.74
VPS33AQ96AX1 SNRPFP1-201ENST00000414761 252 ntBASIC4.19□□□□□ -1.74
VPS33AQ96AX1 AL354692.1-201ENST00000423044 315 ntBASIC4.19□□□□□ -1.74
VPS33AQ96AX1 C1DP1-201ENST00000426049 402 ntBASIC4.19□□□□□ -1.74
VPS33AQ96AX1 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.19□□□□□ -1.74
VPS33AQ96AX1 MTCO1P3-201ENST00000429327 192 ntBASIC4.19□□□□□ -1.74
VPS33AQ96AX1 AC005345.1-201ENST00000431868 217 ntBASIC4.19□□□□□ -1.74
VPS33AQ96AX1 ELOCP18-201ENST00000434209 337 ntBASIC4.19□□□□□ -1.74
VPS33AQ96AX1 RPL7P28-201ENST00000437739 740 ntBASIC4.19□□□□□ -1.74
VPS33AQ96AX1 AC092393.1-201ENST00000439625 742 ntBASIC4.19□□□□□ -1.74
VPS33AQ96AX1 HMGN2P21-201ENST00000447764 270 ntBASIC4.19□□□□□ -1.74
VPS33AQ96AX1 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC4.19□□□□□ -1.74
VPS33AQ96AX1 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.19□□□□□ -1.74
VPS33AQ96AX1 TRBV26-201ENST00000456572 344 ntBASIC4.19□□□□□ -1.74
VPS33AQ96AX1 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.19□□□□□ -1.74
VPS33AQ96AX1 AC079203.1-201ENST00000487972 404 ntBASIC4.19□□□□□ -1.74
VPS33AQ96AX1 AC139783.2-201ENST00000504847 1145 ntBASIC4.19□□□□□ -1.74
VPS33AQ96AX1 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms