Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
SLC44A1Q8WWI5 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.33□□□□□ -1.72
SLC44A1Q8WWI5 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.32□□□□□ -1.72
SLC44A1Q8WWI5 AC119744.1-201ENST00000454746 1715 ntBASIC4.32□□□□□ -1.72
SLC44A1Q8WWI5 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.32□□□□□ -1.72
SLC44A1Q8WWI5 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.32□□□□□ -1.72
SLC44A1Q8WWI5 SGO1P1-201ENST00000603525 1447 ntBASIC4.32□□□□□ -1.72
SLC44A1Q8WWI5 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.32□□□□□ -1.72
SLC44A1Q8WWI5 MTND4P8-201ENST00000514997 1362 ntBASIC4.32□□□□□ -1.72
SLC44A1Q8WWI5 AC005261.4-201ENST00000600047 1385 ntBASIC4.32□□□□□ -1.72
SLC44A1Q8WWI5 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SLC44A1Q8WWI5 SNORA40.2-201ENST00000390847 128 ntBASIC4.32□□□□□ -1.72
SLC44A1Q8WWI5 RPS16P5-201ENST00000406501 404 ntBASIC4.32□□□□□ -1.72
SLC44A1Q8WWI5 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SLC44A1Q8WWI5 RNU6-575P-201ENST00000411326 105 ntBASIC4.32□□□□□ -1.72
SLC44A1Q8WWI5 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.32□□□□□ -1.72
SLC44A1Q8WWI5 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC4.32□□□□□ -1.72
SLC44A1Q8WWI5 OR4K6P-201ENST00000416478 897 ntBASIC4.32□□□□□ -1.72
SLC44A1Q8WWI5 VPS26BP1-201ENST00000417155 755 ntBASIC4.32□□□□□ -1.72
SLC44A1Q8WWI5 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.32□□□□□ -1.72
SLC44A1Q8WWI5 NPM1P24-201ENST00000428039 894 ntBASIC4.32□□□□□ -1.72
SLC44A1Q8WWI5 RPL7P4-203ENST00000430239 730 ntBASIC4.32□□□□□ -1.72
SLC44A1Q8WWI5 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.32□□□□□ -1.72
SLC44A1Q8WWI5 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC4.32□□□□□ -1.72
SLC44A1Q8WWI5 RPL12P28-201ENST00000430852 489 ntBASIC4.32□□□□□ -1.72
SLC44A1Q8WWI5 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC4.32□□□□□ -1.72
SLC44A1Q8WWI5 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
SLC44A1Q8WWI5 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC4.32□□□□□ -1.72
SLC44A1Q8WWI5 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.32□□□□□ -1.72
SLC44A1Q8WWI5 RPL12P46-201ENST00000436610 195 ntBASIC4.32□□□□□ -1.72
SLC44A1Q8WWI5 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.32□□□□□ -1.72
SLC44A1Q8WWI5 CEACAMP6-201ENST00000452007 574 ntBASIC4.32□□□□□ -1.72
SLC44A1Q8WWI5 MRPL35P4-201ENST00000453682 566 ntBASIC4.32□□□□□ -1.72
SLC44A1Q8WWI5 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC4.32□□□□□ -1.72
SLC44A1Q8WWI5 DHFRP3-201ENST00000455595 559 ntBASIC4.32□□□□□ -1.72
SLC44A1Q8WWI5 AC005410.1-202ENST00000460347 485 ntBASIC4.32□□□□□ -1.72
SLC44A1Q8WWI5 RN7SL459P-201ENST00000481078 302 ntBASIC4.32□□□□□ -1.72
SLC44A1Q8WWI5 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
SLC44A1Q8WWI5 IGBP1P5-201ENST00000507524 1000 ntBASIC4.32□□□□□ -1.72
SLC44A1Q8WWI5 AC023632.1-201ENST00000518463 375 ntBASIC4.32□□□□□ -1.72
SLC44A1Q8WWI5 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.32□□□□□ -1.72
SLC44A1Q8WWI5 OR4U1P-201ENST00000554958 912 ntBASIC4.32□□□□□ -1.72
SLC44A1Q8WWI5 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC4.32□□□□□ -1.72
SLC44A1Q8WWI5 AC090695.1-201ENST00000561269 1222 ntBASIC4.32□□□□□ -1.72
SLC44A1Q8WWI5 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.32□□□□□ -1.72
SLC44A1Q8WWI5 MTND3P13-201ENST00000574391 343 ntBASIC4.32□□□□□ -1.72
SLC44A1Q8WWI5 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC4.32□□□□□ -1.72
SLC44A1Q8WWI5 AC245036.5-201ENST00000596330 847 ntBASIC4.32□□□□□ -1.72
SLC44A1Q8WWI5 AC068790.7-201ENST00000602347 528 ntBASIC4.32□□□□□ -1.72
SLC44A1Q8WWI5 GAS5-AS1-201ENST00000602767 694 ntBASIC4.32□□□□□ -1.72
SLC44A1Q8WWI5 AC025588.2-201ENST00000604851 466 ntBASIC4.32□□□□□ -1.72
SLC44A1Q8WWI5 AC107952.2-201ENST00000606048 486 ntBASIC4.32□□□□□ -1.72
SLC44A1Q8WWI5 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC4.32□□□□□ -1.72
SLC44A1Q8WWI5 MIR6780A-201ENST00000615089 68 ntBASIC4.32□□□□□ -1.72
SLC44A1Q8WWI5 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SLC44A1Q8WWI5 AP000346.3-201ENST00000622821 210 ntBASIC4.32□□□□□ -1.72
SLC44A1Q8WWI5 AP002782.1-201ENST00000623107 614 ntBASIC4.32□□□□□ -1.72
SLC44A1Q8WWI5 AC116563.2-201ENST00000624751 535 ntBASIC4.32□□□□□ -1.72
SLC44A1Q8WWI5 AC087821.2-201ENST00000637086 450 ntBASIC4.32□□□□□ -1.72
SLC44A1Q8WWI5 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
SLC44A1Q8WWI5 MFSD8-245ENST00000641743 948 ntBASIC4.32□□□□□ -1.72
SLC44A1Q8WWI5 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
SLC44A1Q8WWI5 AC009229.4-201ENST00000623854 1947 ntBASIC4.32□□□□□ -1.72
SLC44A1Q8WWI5 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.32□□□□□ -1.72
SLC44A1Q8WWI5 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
SLC44A1Q8WWI5 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
SLC44A1Q8WWI5 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
SLC44A1Q8WWI5 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SLC44A1Q8WWI5 AC006971.1-201ENST00000407916 4486 ntBASIC4.31□□□□□ -1.72
SLC44A1Q8WWI5 AL451142.2-201ENST00000429076 2090 ntBASIC4.31□□□□□ -1.72
SLC44A1Q8WWI5 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
SLC44A1Q8WWI5 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SLC44A1Q8WWI5 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SLC44A1Q8WWI5 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SLC44A1Q8WWI5 AC008033.1-201ENST00000216407 1162 ntBASIC4.31□□□□□ -1.72
SLC44A1Q8WWI5 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
SLC44A1Q8WWI5 AC079741.1-201ENST00000321498 212 ntBASIC4.31□□□□□ -1.72
SLC44A1Q8WWI5 SNORD113.2-201ENST00000364166 89 ntBASIC4.31□□□□□ -1.72
SLC44A1Q8WWI5 OR1L1-202ENST00000373686 1083 ntBASIC4.31□□□□□ -1.72
SLC44A1Q8WWI5 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SLC44A1Q8WWI5 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
SLC44A1Q8WWI5 SNORA70F-201ENST00000384142 135 ntBASIC4.31□□□□□ -1.72
SLC44A1Q8WWI5 RNU6-1242P-201ENST00000391052 103 ntBASIC4.31□□□□□ -1.72
SLC44A1Q8WWI5 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.31□□□□□ -1.72
SLC44A1Q8WWI5 RNA5SP306-201ENST00000411087 107 ntBASIC4.31□□□□□ -1.72
SLC44A1Q8WWI5 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.31□□□□□ -1.72
SLC44A1Q8WWI5 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.31□□□□□ -1.72
SLC44A1Q8WWI5 AL158073.1-201ENST00000426848 1104 ntBASIC4.31□□□□□ -1.72
SLC44A1Q8WWI5 CETN4P-201ENST00000432407 469 ntBASIC4.31□□□□□ -1.72
SLC44A1Q8WWI5 HSD52-202ENST00000436225 772 ntTSL 3 BASIC4.31□□□□□ -1.72
SLC44A1Q8WWI5 ACTR3P2-201ENST00000439585 1257 ntBASIC4.31□□□□□ -1.72
SLC44A1Q8WWI5 AL138878.2-201ENST00000440581 1241 ntBASIC4.31□□□□□ -1.72
SLC44A1Q8WWI5 MRPL42P4-201ENST00000453267 443 ntBASIC4.31□□□□□ -1.72
SLC44A1Q8WWI5 NDUFA12P1-201ENST00000455914 406 ntBASIC4.31□□□□□ -1.72
SLC44A1Q8WWI5 RPL37P3-201ENST00000456825 293 ntBASIC4.31□□□□□ -1.72
SLC44A1Q8WWI5 RN7SL354P-201ENST00000469282 294 ntBASIC4.31□□□□□ -1.72
SLC44A1Q8WWI5 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.31□□□□□ -1.72
SLC44A1Q8WWI5 BNIP3P41-201ENST00000503774 571 ntBASIC4.31□□□□□ -1.72
SLC44A1Q8WWI5 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC4.31□□□□□ -1.72
SLC44A1Q8WWI5 RN7SKP283-201ENST00000517197 270 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms