Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.99□□□□□ -1.77
CCDC50Q8IVM0 AL137849.1-201ENST00000604767 169 ntBASIC3.99□□□□□ -1.77
CCDC50Q8IVM0 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC3.99□□□□□ -1.77
CCDC50Q8IVM0 AC100814.1-201ENST00000606963 623 ntBASIC3.99□□□□□ -1.77
CCDC50Q8IVM0 AC103710.3-201ENST00000608157 948 ntBASIC3.99□□□□□ -1.77
CCDC50Q8IVM0 AL354760.1-201ENST00000608357 643 ntBASIC3.99□□□□□ -1.77
CCDC50Q8IVM0 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC3.99□□□□□ -1.77
CCDC50Q8IVM0 AL136964.1-201ENST00000622038 2990 ntBASIC3.99□□□□□ -1.77
CCDC50Q8IVM0 MIR6500-201ENST00000622700 86 ntBASIC3.99□□□□□ -1.77
CCDC50Q8IVM0 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC3.99□□□□□ -1.77
CCDC50Q8IVM0 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
CCDC50Q8IVM0 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC50Q8IVM0 AC006042.3-201ENST00000454684 1469 ntBASIC3.98□□□□□ -1.77
CCDC50Q8IVM0 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC50Q8IVM0 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC50Q8IVM0 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC50Q8IVM0 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC50Q8IVM0 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.98□□□□□ -1.77
CCDC50Q8IVM0 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC50Q8IVM0 AL353692.2-201ENST00000407054 335 ntBASIC3.98□□□□□ -1.77
CCDC50Q8IVM0 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.98□□□□□ -1.77
CCDC50Q8IVM0 TRGV6-201ENST00000417928 299 ntBASIC3.98□□□□□ -1.77
CCDC50Q8IVM0 MTND4P24-201ENST00000424002 397 ntBASIC3.98□□□□□ -1.77
CCDC50Q8IVM0 FAR2P4-202ENST00000425399 584 ntBASIC3.98□□□□□ -1.77
CCDC50Q8IVM0 C4BPAP2-201ENST00000428434 478 ntBASIC3.98□□□□□ -1.77
CCDC50Q8IVM0 MTND4LP14-201ENST00000429447 288 ntBASIC3.98□□□□□ -1.77
CCDC50Q8IVM0 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.98□□□□□ -1.77
CCDC50Q8IVM0 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC3.98□□□□□ -1.77
CCDC50Q8IVM0 MED6P1-201ENST00000439659 713 ntBASIC3.98□□□□□ -1.77
CCDC50Q8IVM0 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.98□□□□□ -1.77
CCDC50Q8IVM0 RPS7P7-201ENST00000463499 571 ntBASIC3.98□□□□□ -1.77
CCDC50Q8IVM0 RPS23P7-201ENST00000466210 444 ntBASIC3.98□□□□□ -1.77
CCDC50Q8IVM0 TRBV8-2-201ENST00000475637 270 ntBASIC3.98□□□□□ -1.77
CCDC50Q8IVM0 AL049830.2-201ENST00000480072 201 ntBASIC3.98□□□□□ -1.77
CCDC50Q8IVM0 OR9N1P-202ENST00000494289 481 ntBASIC3.98□□□□□ -1.77
CCDC50Q8IVM0 RN7SKP209-201ENST00000516888 304 ntBASIC3.98□□□□□ -1.77
CCDC50Q8IVM0 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.98□□□□□ -1.77
CCDC50Q8IVM0 AC093331.1-201ENST00000521474 169 ntBASIC3.98□□□□□ -1.77
CCDC50Q8IVM0 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC3.98□□□□□ -1.77
CCDC50Q8IVM0 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.98□□□□□ -1.77
CCDC50Q8IVM0 AL121594.4-201ENST00000556211 1196 ntBASIC3.98□□□□□ -1.77
CCDC50Q8IVM0 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC3.98□□□□□ -1.77
CCDC50Q8IVM0 AF230666.2-201ENST00000602328 725 ntBASIC3.98□□□□□ -1.77
CCDC50Q8IVM0 AC015726.1-201ENST00000602353 681 ntBASIC3.98□□□□□ -1.77
CCDC50Q8IVM0 AL390816.3-201ENST00000604527 1066 ntBASIC3.98□□□□□ -1.77
CCDC50Q8IVM0 AC010857.1-201ENST00000606398 594 ntBASIC3.98□□□□□ -1.77
CCDC50Q8IVM0 AL355816.1-201ENST00000607951 118 ntBASIC3.98□□□□□ -1.77
CCDC50Q8IVM0 AC110792.4-201ENST00000609843 298 ntBASIC3.98□□□□□ -1.77
CCDC50Q8IVM0 MIR378J-201ENST00000611988 109 ntBASIC3.98□□□□□ -1.77
CCDC50Q8IVM0 MIR6716-201ENST00000613413 80 ntBASIC3.98□□□□□ -1.77
CCDC50Q8IVM0 AC104307.1-201ENST00000616142 196 ntBASIC3.98□□□□□ -1.77
CCDC50Q8IVM0 AC123768.4-201ENST00000616244 701 ntBASIC3.98□□□□□ -1.77
CCDC50Q8IVM0 AC025016.1-201ENST00000616746 682 ntBASIC3.98□□□□□ -1.77
CCDC50Q8IVM0 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
CCDC50Q8IVM0 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC50Q8IVM0 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.98□□□□□ -1.77
CCDC50Q8IVM0 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
CCDC50Q8IVM0 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC50Q8IVM0 GTF2H2B-203ENST00000508065 1432 ntBASIC3.97□□□□□ -1.77
CCDC50Q8IVM0 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC50Q8IVM0 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
CCDC50Q8IVM0 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC50Q8IVM0 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
CCDC50Q8IVM0 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC50Q8IVM0 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC50Q8IVM0 MIR141-201ENST00000384975 95 ntBASIC3.97□□□□□ -1.77
CCDC50Q8IVM0 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC50Q8IVM0 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC50Q8IVM0 AL049693.1-201ENST00000402760 611 ntBASIC3.97□□□□□ -1.77
CCDC50Q8IVM0 AL391417.1-201ENST00000404100 426 ntBASIC3.97□□□□□ -1.77
CCDC50Q8IVM0 RNA5SP317-201ENST00000410176 116 ntBASIC3.97□□□□□ -1.77
CCDC50Q8IVM0 RNA5SP311-201ENST00000411290 116 ntBASIC3.97□□□□□ -1.77
CCDC50Q8IVM0 AIMP1P1-201ENST00000418670 937 ntBASIC3.97□□□□□ -1.77
CCDC50Q8IVM0 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC50Q8IVM0 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC50Q8IVM0 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.97□□□□□ -1.77
CCDC50Q8IVM0 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC3.97□□□□□ -1.77
CCDC50Q8IVM0 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC3.97□□□□□ -1.77
CCDC50Q8IVM0 Z74696.2-201ENST00000436514 498 ntBASIC3.97□□□□□ -1.77
CCDC50Q8IVM0 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC50Q8IVM0 AC006326.1-201ENST00000445465 787 ntBASIC3.97□□□□□ -1.77
CCDC50Q8IVM0 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC3.97□□□□□ -1.77
CCDC50Q8IVM0 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.97□□□□□ -1.77
CCDC50Q8IVM0 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.97□□□□□ -1.77
CCDC50Q8IVM0 CYCSP20-201ENST00000473154 315 ntBASIC3.97□□□□□ -1.77
CCDC50Q8IVM0 AP000893.1-201ENST00000474462 794 ntBASIC3.97□□□□□ -1.77
CCDC50Q8IVM0 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.97□□□□□ -1.77
CCDC50Q8IVM0 RAC1P2-201ENST00000511164 579 ntBASIC3.97□□□□□ -1.77
CCDC50Q8IVM0 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.97□□□□□ -1.77
CCDC50Q8IVM0 RNA5SP315-201ENST00000516340 116 ntBASIC3.97□□□□□ -1.77
CCDC50Q8IVM0 RNA5SP312-201ENST00000517068 116 ntBASIC3.97□□□□□ -1.77
CCDC50Q8IVM0 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC3.97□□□□□ -1.77
CCDC50Q8IVM0 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC50Q8IVM0 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.97□□□□□ -1.77
CCDC50Q8IVM0 CKS1BP1-201ENST00000555221 240 ntBASIC3.97□□□□□ -1.77
CCDC50Q8IVM0 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC3.97□□□□□ -1.77
CCDC50Q8IVM0 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC3.97□□□□□ -1.77
CCDC50Q8IVM0 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC3.97□□□□□ -1.77
CCDC50Q8IVM0 CBX3P2-202ENST00000583365 535 ntBASIC3.97□□□□□ -1.77
CCDC50Q8IVM0 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms