Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC6.21□□□□□ -1.42
NPAS4Q8IUM7 AC069213.2-201ENST00000420238 366 ntBASIC6.21□□□□□ -1.42
NPAS4Q8IUM7 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC6.21□□□□□ -1.42
NPAS4Q8IUM7 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC6.21□□□□□ -1.42
NPAS4Q8IUM7 PSMA6P3-201ENST00000428242 164 ntBASIC6.21□□□□□ -1.42
NPAS4Q8IUM7 AC133104.1-201ENST00000429100 218 ntBASIC6.21□□□□□ -1.42
NPAS4Q8IUM7 PTMAP6-201ENST00000439110 327 ntBASIC6.21□□□□□ -1.42
NPAS4Q8IUM7 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
NPAS4Q8IUM7 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC6.21□□□□□ -1.42
NPAS4Q8IUM7 AL136380.1-201ENST00000447970 162 ntBASIC6.21□□□□□ -1.42
NPAS4Q8IUM7 RGS5-217ENST00000451759 835 ntTSL 3 BASIC6.21□□□□□ -1.42
NPAS4Q8IUM7 RPL7P39-201ENST00000481157 744 ntBASIC6.21□□□□□ -1.42
NPAS4Q8IUM7 RPL23AP72-201ENST00000492447 435 ntBASIC6.21□□□□□ -1.42
NPAS4Q8IUM7 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC6.21□□□□□ -1.42
NPAS4Q8IUM7 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC6.21□□□□□ -1.42
NPAS4Q8IUM7 RNA5SP92-201ENST00000516437 110 ntBASIC6.21□□□□□ -1.42
NPAS4Q8IUM7 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC6.21□□□□□ -1.42
NPAS4Q8IUM7 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC6.21□□□□□ -1.42
NPAS4Q8IUM7 OR10G5P-201ENST00000532733 358 ntBASIC6.21□□□□□ -1.42
NPAS4Q8IUM7 AC090424.1-201ENST00000535243 736 ntBASIC6.21□□□□□ -1.42
NPAS4Q8IUM7 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC6.21□□□□□ -1.42
NPAS4Q8IUM7 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC6.21□□□□□ -1.42
NPAS4Q8IUM7 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC6.21□□□□□ -1.42
NPAS4Q8IUM7 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC6.21□□□□□ -1.42
NPAS4Q8IUM7 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC6.21□□□□□ -1.42
NPAS4Q8IUM7 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC6.21□□□□□ -1.42
NPAS4Q8IUM7 AC011816.2-201ENST00000607089 556 ntBASIC6.21□□□□□ -1.42
NPAS4Q8IUM7 AL512329.2-201ENST00000607350 548 ntBASIC6.21□□□□□ -1.42
NPAS4Q8IUM7 BX664608.1-201ENST00000610519 487 ntBASIC6.21□□□□□ -1.42
NPAS4Q8IUM7 AC037198.3-201ENST00000616754 526 ntBASIC6.21□□□□□ -1.42
NPAS4Q8IUM7 AC009159.1-201ENST00000618386 642 ntBASIC6.21□□□□□ -1.42
NPAS4Q8IUM7 AC079597.1-201ENST00000624306 508 ntBASIC6.21□□□□□ -1.42
NPAS4Q8IUM7 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC6.21□□□□□ -1.42
NPAS4Q8IUM7 FER-210ENST00000628534 558 ntTSL 5 BASIC6.21□□□□□ -1.42
NPAS4Q8IUM7 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
NPAS4Q8IUM7 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
NPAS4Q8IUM7 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC6.21□□□□□ -1.42
NPAS4Q8IUM7 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
NPAS4Q8IUM7 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
NPAS4Q8IUM7 CARF-208ENST00000428585 2513 ntTSL 2 BASIC6.21□□□□□ -1.42
NPAS4Q8IUM7 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC6.21□□□□□ -1.42
NPAS4Q8IUM7 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
NPAS4Q8IUM7 AC009779.8-201ENST00000641684 4384 ntBASIC6.2□□□□□ -1.42
NPAS4Q8IUM7 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
NPAS4Q8IUM7 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
NPAS4Q8IUM7 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
NPAS4Q8IUM7 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC6.2□□□□□ -1.42
NPAS4Q8IUM7 Y_RNA.535-201ENST00000384612 99 ntBASIC6.2□□□□□ -1.42
NPAS4Q8IUM7 RNU6-1009P-201ENST00000390996 107 ntBASIC6.2□□□□□ -1.42
NPAS4Q8IUM7 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC6.2□□□□□ -1.42
NPAS4Q8IUM7 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC6.2□□□□□ -1.42
NPAS4Q8IUM7 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC6.2□□□□□ -1.42
NPAS4Q8IUM7 AC015977.1-201ENST00000418887 292 ntBASIC6.2□□□□□ -1.42
NPAS4Q8IUM7 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC6.2□□□□□ -1.42
NPAS4Q8IUM7 AC008065.1-201ENST00000428525 348 ntBASIC6.2□□□□□ -1.42
NPAS4Q8IUM7 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC6.2□□□□□ -1.42
NPAS4Q8IUM7 AC002486.1-201ENST00000435098 391 ntBASIC6.2□□□□□ -1.42
NPAS4Q8IUM7 AC108734.1-201ENST00000439549 399 ntBASIC6.2□□□□□ -1.42
NPAS4Q8IUM7 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC6.2□□□□□ -1.42
NPAS4Q8IUM7 DPPA3P1-201ENST00000448050 469 ntBASIC6.2□□□□□ -1.42
NPAS4Q8IUM7 AL450023.1-201ENST00000450868 751 ntBASIC6.2□□□□□ -1.42
NPAS4Q8IUM7 C1DP4-201ENST00000455429 424 ntBASIC6.2□□□□□ -1.42
NPAS4Q8IUM7 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC6.2□□□□□ -1.42
NPAS4Q8IUM7 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC6.2□□□□□ -1.42
NPAS4Q8IUM7 NPM1P41-201ENST00000512920 831 ntBASIC6.2□□□□□ -1.42
NPAS4Q8IUM7 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC6.2□□□□□ -1.42
NPAS4Q8IUM7 Vault.3-201ENST00000516676 95 ntBASIC6.2□□□□□ -1.42
NPAS4Q8IUM7 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC6.2□□□□□ -1.42
NPAS4Q8IUM7 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
NPAS4Q8IUM7 HMGB1P33-201ENST00000563485 527 ntBASIC6.2□□□□□ -1.42
NPAS4Q8IUM7 MRPS21P7-201ENST00000566937 238 ntBASIC6.2□□□□□ -1.42
NPAS4Q8IUM7 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC6.2□□□□□ -1.42
NPAS4Q8IUM7 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC6.2□□□□□ -1.42
NPAS4Q8IUM7 AC008782.1-201ENST00000603386 430 ntBASIC6.2□□□□□ -1.42
NPAS4Q8IUM7 AL445222.1-201ENST00000607259 628 ntBASIC6.2□□□□□ -1.42
NPAS4Q8IUM7 AC090607.5-201ENST00000615692 224 ntBASIC6.2□□□□□ -1.42
NPAS4Q8IUM7 MLECP1-201ENST00000615893 709 ntBASIC6.2□□□□□ -1.42
NPAS4Q8IUM7 AC002553.4-201ENST00000616896 331 ntBASIC6.2□□□□□ -1.42
NPAS4Q8IUM7 AL355974.3-201ENST00000617383 467 ntBASIC6.2□□□□□ -1.42
NPAS4Q8IUM7 AL596245.1-201ENST00000618994 362 ntBASIC6.2□□□□□ -1.42
NPAS4Q8IUM7 AL136221.1-201ENST00000621449 509 ntBASIC6.2□□□□□ -1.42
NPAS4Q8IUM7 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC6.2□□□□□ -1.42
NPAS4Q8IUM7 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
NPAS4Q8IUM7 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC6.2□□□□□ -1.42
NPAS4Q8IUM7 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
NPAS4Q8IUM7 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC6.2□□□□□ -1.42
NPAS4Q8IUM7 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC6.2□□□□□ -1.42
NPAS4Q8IUM7 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.2□□□□□ -1.42
NPAS4Q8IUM7 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
NPAS4Q8IUM7 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
NPAS4Q8IUM7 CASC19-280ENST00000642102 1351 ntBASIC6.19□□□□□ -1.42
NPAS4Q8IUM7 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC6.19□□□□□ -1.42
NPAS4Q8IUM7 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.19□□□□□ -1.42
NPAS4Q8IUM7 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
NPAS4Q8IUM7 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
NPAS4Q8IUM7 Y_RNA.1-201ENST00000352915 104 ntBASIC6.19□□□□□ -1.42
NPAS4Q8IUM7 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC6.19□□□□□ -1.42
NPAS4Q8IUM7 RNA5SP258-201ENST00000362750 119 ntBASIC6.19□□□□□ -1.42
NPAS4Q8IUM7 RNA5SP30-201ENST00000365552 115 ntBASIC6.19□□□□□ -1.42
NPAS4Q8IUM7 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms