Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.53□□□□□ -1.68
RAE1P78406 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC4.53□□□□□ -1.68
RAE1P78406 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC4.53□□□□□ -1.68
RAE1P78406 AC133555.2-201ENST00000550213 292 ntBASIC4.53□□□□□ -1.68
RAE1P78406 HMGN2P6-201ENST00000551091 273 ntBASIC4.53□□□□□ -1.68
RAE1P78406 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC4.53□□□□□ -1.68
RAE1P78406 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC4.53□□□□□ -1.68
RAE1P78406 AC074051.3-201ENST00000570238 358 ntBASIC4.53□□□□□ -1.68
RAE1P78406 RN7SL753P-201ENST00000581238 290 ntBASIC4.53□□□□□ -1.68
RAE1P78406 AC008759.1-201ENST00000589783 983 ntBASIC4.53□□□□□ -1.68
RAE1P78406 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.53□□□□□ -1.68
RAE1P78406 U73023.1-201ENST00000603134 700 ntBASIC4.53□□□□□ -1.68
RAE1P78406 AL596327.1-201ENST00000603629 213 ntBASIC4.53□□□□□ -1.68
RAE1P78406 MTCYBP22-201ENST00000603788 447 ntBASIC4.53□□□□□ -1.68
RAE1P78406 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC4.53□□□□□ -1.68
RAE1P78406 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
RAE1P78406 AC123768.4-201ENST00000616244 701 ntBASIC4.53□□□□□ -1.68
RAE1P78406 SMG1P4-204ENST00000523028 4131 ntBASIC4.53□□□□□ -1.68
RAE1P78406 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
RAE1P78406 HSPA8P14-201ENST00000552265 1805 ntBASIC4.53□□□□□ -1.68
RAE1P78406 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
RAE1P78406 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
RAE1P78406 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
RAE1P78406 XPOTP1-201ENST00000443317 2398 ntBASIC4.53□□□□□ -1.68
RAE1P78406 ZNF37BP-203ENST00000452306 1352 ntBASIC4.53□□□□□ -1.69
RAE1P78406 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
RAE1P78406 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
RAE1P78406 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
RAE1P78406 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
RAE1P78406 AL672167.1-203ENST00000641299 2975 ntBASIC4.52□□□□□ -1.69
RAE1P78406 RPL21P132-201ENST00000331267 462 ntBASIC4.52□□□□□ -1.69
RAE1P78406 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
RAE1P78406 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
RAE1P78406 Y_RNA.559-201ENST00000384686 107 ntBASIC4.52□□□□□ -1.69
RAE1P78406 RNU1-82P-201ENST00000390851 165 ntBASIC4.52□□□□□ -1.69
RAE1P78406 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
RAE1P78406 EI24P3-201ENST00000399046 1062 ntBASIC4.52□□□□□ -1.69
RAE1P78406 AL078604.1-201ENST00000404609 466 ntBASIC4.52□□□□□ -1.69
RAE1P78406 AL080315.1-201ENST00000406055 466 ntBASIC4.52□□□□□ -1.69
RAE1P78406 MRM2-202ENST00000407040 582 ntTSL 3 BASIC4.52□□□□□ -1.69
RAE1P78406 OR6C64P-201ENST00000419708 825 ntBASIC4.52□□□□□ -1.69
RAE1P78406 AC006366.1-201ENST00000422002 759 ntBASIC4.52□□□□□ -1.69
RAE1P78406 AC073335.1-201ENST00000427776 363 ntBASIC4.52□□□□□ -1.69
RAE1P78406 VDAC1P6-201ENST00000430062 855 ntBASIC4.52□□□□□ -1.69
RAE1P78406 DLGAP5P1-201ENST00000430307 464 ntBASIC4.52□□□□□ -1.69
RAE1P78406 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC4.52□□□□□ -1.69
RAE1P78406 PRPF38AP2-201ENST00000438179 851 ntBASIC4.52□□□□□ -1.69
RAE1P78406 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.52□□□□□ -1.69
RAE1P78406 RN7SL177P-201ENST00000476596 299 ntBASIC4.52□□□□□ -1.69
RAE1P78406 RPL7AP6-201ENST00000477943 801 ntBASIC4.52□□□□□ -1.69
RAE1P78406 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.52□□□□□ -1.69
RAE1P78406 AC090013.1-201ENST00000485147 480 ntBASIC4.52□□□□□ -1.69
RAE1P78406 AC068724.1-201ENST00000487100 792 ntBASIC4.52□□□□□ -1.69
RAE1P78406 AHI1-208ENST00000488690 712 ntTSL 5 BASIC4.52□□□□□ -1.69
RAE1P78406 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.52□□□□□ -1.69
RAE1P78406 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC4.52□□□□□ -1.69
RAE1P78406 RNU6-583P-201ENST00000516012 92 ntBASIC4.52□□□□□ -1.69
RAE1P78406 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.52□□□□□ -1.69
RAE1P78406 IGLV2-28-201ENST00000520681 304 ntBASIC4.52□□□□□ -1.69
RAE1P78406 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.52□□□□□ -1.69
RAE1P78406 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.52□□□□□ -1.69
RAE1P78406 AC239860.2-201ENST00000525886 270 ntBASIC4.52□□□□□ -1.69
RAE1P78406 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC4.52□□□□□ -1.69
RAE1P78406 AC079075.1-201ENST00000559543 878 ntBASIC4.52□□□□□ -1.69
RAE1P78406 AC090515.3-201ENST00000560431 315 ntBASIC4.52□□□□□ -1.69
RAE1P78406 SULT1C2P1-202ENST00000562418 459 ntBASIC4.52□□□□□ -1.69
RAE1P78406 EIF5A2P1-201ENST00000564027 460 ntBASIC4.52□□□□□ -1.69
RAE1P78406 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.52□□□□□ -1.69
RAE1P78406 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.52□□□□□ -1.69
RAE1P78406 AP001521.1-201ENST00000609150 300 ntBASIC4.52□□□□□ -1.69
RAE1P78406 FAM27B-201ENST00000610601 213 ntBASIC4.52□□□□□ -1.69
RAE1P78406 AC018816.2-201ENST00000621460 353 ntBASIC4.52□□□□□ -1.69
RAE1P78406 AC009878.1-201ENST00000621819 340 ntBASIC4.52□□□□□ -1.69
RAE1P78406 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC4.52□□□□□ -1.69
RAE1P78406 AC006927.3-201ENST00000638789 384 ntBASIC4.52□□□□□ -1.69
RAE1P78406 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
RAE1P78406 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
RAE1P78406 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
RAE1P78406 AC092104.1-201ENST00000497346 1441 ntBASIC4.52□□□□□ -1.69
RAE1P78406 MTND5P24-201ENST00000438892 1767 ntBASIC4.52□□□□□ -1.69
RAE1P78406 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.52□□□□□ -1.69
RAE1P78406 AC126323.6-202ENST00000568092 3511 ntBASIC4.52□□□□□ -1.69
RAE1P78406 AC009229.4-201ENST00000623854 1947 ntBASIC4.52□□□□□ -1.69
RAE1P78406 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
RAE1P78406 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
RAE1P78406 AC107068.1-201ENST00000563286 4218 ntBASIC4.51□□□□□ -1.69
RAE1P78406 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
RAE1P78406 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
RAE1P78406 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.51□□□□□ -1.69
RAE1P78406 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
RAE1P78406 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.51□□□□□ -1.69
RAE1P78406 AC005332.5-201ENST00000591222 2919 ntBASIC4.51□□□□□ -1.69
RAE1P78406 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
RAE1P78406 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
RAE1P78406 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
RAE1P78406 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
RAE1P78406 RNU6-374P-201ENST00000364146 108 ntBASIC4.51□□□□□ -1.69
RAE1P78406 RNU2-28P-201ENST00000410457 189 ntBASIC4.51□□□□□ -1.69
RAE1P78406 AL953862.1-201ENST00000423016 168 ntBASIC4.51□□□□□ -1.69
RAE1P78406 FABP7P1-201ENST00000424004 391 ntBASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms