Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
YBX1P67809 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
YBX1P67809 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
YBX1P67809 AC046144.1-201ENST00000478559 1853 ntBASIC5.42□□□□□ -1.54
YBX1P67809 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
YBX1P67809 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
YBX1P67809 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC5.42□□□□□ -1.54
YBX1P67809 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.42□□□□□ -1.54
YBX1P67809 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC5.42□□□□□ -1.54
YBX1P67809 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.42□□□□□ -1.54
YBX1P67809 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
YBX1P67809 ARHGAP42P1-201ENST00000507474 1976 ntBASIC5.42□□□□□ -1.54
YBX1P67809 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.42□□□□□ -1.54
YBX1P67809 AC144833.1-201ENST00000567953 4089 ntBASIC5.42□□□□□ -1.54
YBX1P67809 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
YBX1P67809 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.41□□□□□ -1.54
YBX1P67809 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.41□□□□□ -1.54
YBX1P67809 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
YBX1P67809 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
YBX1P67809 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
YBX1P67809 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
YBX1P67809 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
YBX1P67809 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.41□□□□□ -1.54
YBX1P67809 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.41□□□□□ -1.54
YBX1P67809 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
YBX1P67809 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
YBX1P67809 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
YBX1P67809 RNA5SP242-201ENST00000364171 118 ntBASIC5.41□□□□□ -1.54
YBX1P67809 SNORD81.2-201ENST00000365153 76 ntBASIC5.41□□□□□ -1.54
YBX1P67809 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
YBX1P67809 Y_RNA.481-201ENST00000384373 102 ntBASIC5.41□□□□□ -1.54
YBX1P67809 SNORA51.12-201ENST00000384448 134 ntBASIC5.41□□□□□ -1.54
YBX1P67809 AL034374.1-201ENST00000406329 351 ntBASIC5.41□□□□□ -1.54
YBX1P67809 AL450338.1-201ENST00000407987 512 ntBASIC5.41□□□□□ -1.54
YBX1P67809 RPSAP35-201ENST00000413753 818 ntBASIC5.41□□□□□ -1.54
YBX1P67809 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC5.41□□□□□ -1.54
YBX1P67809 AL133482.1-201ENST00000415988 498 ntBASIC5.41□□□□□ -1.54
YBX1P67809 BMS1P17-202ENST00000416720 316 ntBASIC5.41□□□□□ -1.54
YBX1P67809 RAD23BP1-201ENST00000421404 1227 ntBASIC5.41□□□□□ -1.54
YBX1P67809 RPL34P3-201ENST00000421454 338 ntBASIC5.41□□□□□ -1.54
YBX1P67809 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC5.41□□□□□ -1.54
YBX1P67809 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC5.41□□□□□ -1.54
YBX1P67809 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.41□□□□□ -1.54
YBX1P67809 AL390119.1-201ENST00000440329 312 ntBASIC5.41□□□□□ -1.54
YBX1P67809 AC092809.1-201ENST00000441469 474 ntBASIC5.41□□□□□ -1.54
YBX1P67809 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC5.41□□□□□ -1.54
YBX1P67809 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC5.41□□□□□ -1.54
YBX1P67809 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC5.41□□□□□ -1.54
YBX1P67809 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC5.41□□□□□ -1.54
YBX1P67809 MEMO1P4-201ENST00000453590 386 ntBASIC5.41□□□□□ -1.54
YBX1P67809 AC083899.1-201ENST00000454465 3819 ntBASIC5.41□□□□□ -1.54
YBX1P67809 MEMO1P3-201ENST00000459811 302 ntBASIC5.41□□□□□ -1.54
YBX1P67809 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
YBX1P67809 AC112204.1-201ENST00000502591 103 ntBASIC5.41□□□□□ -1.54
YBX1P67809 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC5.41□□□□□ -1.54
YBX1P67809 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.41□□□□□ -1.54
YBX1P67809 RNU6-150P-201ENST00000516237 95 ntBASIC5.41□□□□□ -1.54
YBX1P67809 RNU2-46P-201ENST00000517038 113 ntBASIC5.41□□□□□ -1.54
YBX1P67809 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.41□□□□□ -1.54
YBX1P67809 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
YBX1P67809 AP000790.1-201ENST00000528891 737 ntBASIC5.41□□□□□ -1.54
YBX1P67809 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC5.41□□□□□ -1.54
YBX1P67809 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.41□□□□□ -1.54
YBX1P67809 AC037471.2-201ENST00000564941 598 ntBASIC5.41□□□□□ -1.54
YBX1P67809 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.41□□□□□ -1.54
YBX1P67809 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC5.41□□□□□ -1.54
YBX1P67809 AC034268.2-201ENST00000571784 482 ntBASIC5.41□□□□□ -1.54
YBX1P67809 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC5.41□□□□□ -1.54
YBX1P67809 MIR4505-201ENST00000582238 73 ntBASIC5.41□□□□□ -1.54
YBX1P67809 AC090312.2-201ENST00000582687 378 ntBASIC5.41□□□□□ -1.54
YBX1P67809 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.41□□□□□ -1.54
YBX1P67809 VN1R80P-201ENST00000597126 338 ntBASIC5.41□□□□□ -1.54
YBX1P67809 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC5.41□□□□□ -1.54
YBX1P67809 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.41□□□□□ -1.54
YBX1P67809 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.41□□□□□ -1.54
YBX1P67809 AL391646.1-201ENST00000603860 190 ntBASIC5.41□□□□□ -1.54
YBX1P67809 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
YBX1P67809 AC011816.2-201ENST00000607089 556 ntBASIC5.41□□□□□ -1.54
YBX1P67809 AC211433.2-201ENST00000608433 387 ntBASIC5.41□□□□□ -1.54
YBX1P67809 AC093788.1-201ENST00000609356 927 ntBASIC5.41□□□□□ -1.54
YBX1P67809 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC5.41□□□□□ -1.54
YBX1P67809 AL158801.5-201ENST00000623123 465 ntBASIC5.41□□□□□ -1.54
YBX1P67809 CU639417.4-201ENST00000623928 207 ntBASIC5.41□□□□□ -1.54
YBX1P67809 AL049767.1-202ENST00000637826 242 ntBASIC5.41□□□□□ -1.54
YBX1P67809 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
YBX1P67809 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
YBX1P67809 AP000473.2-201ENST00000602659 1537 ntBASIC5.41□□□□□ -1.54
YBX1P67809 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
YBX1P67809 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
YBX1P67809 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.41□□□□□ -1.54
YBX1P67809 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC5.41□□□□□ -1.54
YBX1P67809 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
YBX1P67809 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
YBX1P67809 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
YBX1P67809 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.41□□□□□ -1.54
YBX1P67809 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
YBX1P67809 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
YBX1P67809 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
YBX1P67809 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
YBX1P67809 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms