Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC4.77□□□□□ -1.65
CLRN1P58418 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC4.77□□□□□ -1.65
CLRN1P58418 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC4.77□□□□□ -1.65
CLRN1P58418 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC4.77□□□□□ -1.65
CLRN1P58418 RPS24P16-201ENST00000497294 392 ntBASIC4.77□□□□□ -1.65
CLRN1P58418 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC4.77□□□□□ -1.65
CLRN1P58418 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC4.77□□□□□ -1.65
CLRN1P58418 ARL2BPP6-201ENST00000512757 439 ntBASIC4.77□□□□□ -1.65
CLRN1P58418 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.77□□□□□ -1.65
CLRN1P58418 MTCO2P4-201ENST00000517968 247 ntBASIC4.77□□□□□ -1.65
CLRN1P58418 AC104986.1-201ENST00000517978 436 ntBASIC4.77□□□□□ -1.65
CLRN1P58418 AC022360.1-201ENST00000521058 340 ntBASIC4.77□□□□□ -1.65
CLRN1P58418 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC4.77□□□□□ -1.65
CLRN1P58418 HMGB1P40-201ENST00000525121 540 ntBASIC4.77□□□□□ -1.65
CLRN1P58418 AP000859.1-201ENST00000525536 307 ntBASIC4.77□□□□□ -1.65
CLRN1P58418 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CLRN1P58418 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC4.77□□□□□ -1.65
CLRN1P58418 AC008127.2-201ENST00000549925 1075 ntBASIC4.77□□□□□ -1.65
CLRN1P58418 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC4.77□□□□□ -1.65
CLRN1P58418 CLMN-206ENST00000556441 452 ntTSL 5 BASIC4.77□□□□□ -1.65
CLRN1P58418 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC4.77□□□□□ -1.65
CLRN1P58418 HSPE1P3-201ENST00000559254 309 ntBASIC4.77□□□□□ -1.65
CLRN1P58418 LARP7P2-201ENST00000575306 125 ntBASIC4.77□□□□□ -1.65
CLRN1P58418 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.77□□□□□ -1.65
CLRN1P58418 SLC25A36P1-201ENST00000590111 465 ntBASIC4.77□□□□□ -1.65
CLRN1P58418 AC010200.2-201ENST00000605098 235 ntBASIC4.77□□□□□ -1.65
CLRN1P58418 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC4.77□□□□□ -1.65
CLRN1P58418 AC000068.2-201ENST00000608816 460 ntBASIC4.77□□□□□ -1.65
CLRN1P58418 RNA5SP440-201ENST00000612665 119 ntBASIC4.77□□□□□ -1.65
CLRN1P58418 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC4.77□□□□□ -1.65
CLRN1P58418 MIR8080-201ENST00000622224 89 ntBASIC4.77□□□□□ -1.65
CLRN1P58418 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC4.77□□□□□ -1.65
CLRN1P58418 AP003400.3-201ENST00000624904 346 ntBASIC4.77□□□□□ -1.65
CLRN1P58418 SNORA17.5-201ENST00000630429 132 ntBASIC4.77□□□□□ -1.65
CLRN1P58418 U6.101-201ENST00000637707 76 ntBASIC4.77□□□□□ -1.65
CLRN1P58418 FAM157B-203ENST00000639350 358 ntBASIC4.77□□□□□ -1.65
CLRN1P58418 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CLRN1P58418 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC4.77□□□□□ -1.65
CLRN1P58418 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CLRN1P58418 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
CLRN1P58418 AC109446.4-201ENST00000623235 2755 ntBASIC4.77□□□□□ -1.65
CLRN1P58418 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CLRN1P58418 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CLRN1P58418 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CLRN1P58418 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CLRN1P58418 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
CLRN1P58418 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
CLRN1P58418 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CLRN1P58418 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CLRN1P58418 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CLRN1P58418 ALB-209ENST00000503124 1741 ntTSL 5 BASIC4.77□□□□□ -1.65
CLRN1P58418 SCARNA15-201ENST00000607520 4325 ntBASIC4.77□□□□□ -1.65
CLRN1P58418 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
CLRN1P58418 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CLRN1P58418 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CLRN1P58418 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
CLRN1P58418 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CLRN1P58418 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CLRN1P58418 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
CLRN1P58418 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.76□□□□□ -1.65
CLRN1P58418 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CLRN1P58418 MIR133A2-201ENST00000347538 102 ntBASIC4.76□□□□□ -1.65
CLRN1P58418 Y_RNA.256-201ENST00000364594 104 ntBASIC4.76□□□□□ -1.65
CLRN1P58418 Y_RNA.296-201ENST00000364930 108 ntBASIC4.76□□□□□ -1.65
CLRN1P58418 RN7SKP69-201ENST00000365390 305 ntBASIC4.76□□□□□ -1.65
CLRN1P58418 SNORA5.1-201ENST00000384275 131 ntBASIC4.76□□□□□ -1.65
CLRN1P58418 RNU6-769P-201ENST00000384407 104 ntBASIC4.76□□□□□ -1.65
CLRN1P58418 MIR105-1-201ENST00000385222 81 ntBASIC4.76□□□□□ -1.65
CLRN1P58418 RNU6-952P-201ENST00000391164 108 ntBASIC4.76□□□□□ -1.65
CLRN1P58418 DHFRP6-201ENST00000401776 268 ntBASIC4.76□□□□□ -1.65
CLRN1P58418 RNA5SP487-201ENST00000410186 122 ntBASIC4.76□□□□□ -1.65
CLRN1P58418 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC4.76□□□□□ -1.65
CLRN1P58418 AC079809.1-201ENST00000415468 276 ntBASIC4.76□□□□□ -1.65
CLRN1P58418 COX6CP17-201ENST00000421389 185 ntBASIC4.76□□□□□ -1.65
CLRN1P58418 AC009965.2-201ENST00000425328 970 ntBASIC4.76□□□□□ -1.65
CLRN1P58418 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC4.76□□□□□ -1.65
CLRN1P58418 VTI1BP4-201ENST00000427516 527 ntBASIC4.76□□□□□ -1.65
CLRN1P58418 MTND4LP10-201ENST00000435146 291 ntBASIC4.76□□□□□ -1.65
CLRN1P58418 AC012075.1-201ENST00000436549 580 ntBASIC4.76□□□□□ -1.65
CLRN1P58418 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC4.76□□□□□ -1.65
CLRN1P58418 MTATP6P30-201ENST00000443540 664 ntBASIC4.76□□□□□ -1.65
CLRN1P58418 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC4.76□□□□□ -1.65
CLRN1P58418 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC4.76□□□□□ -1.65
CLRN1P58418 GAPDHP25-201ENST00000447061 1001 ntBASIC4.76□□□□□ -1.65
CLRN1P58418 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC4.76□□□□□ -1.65
CLRN1P58418 ARPC3P5-201ENST00000448802 534 ntBASIC4.76□□□□□ -1.65
CLRN1P58418 GAPDHP17-201ENST00000449858 1001 ntBASIC4.76□□□□□ -1.65
CLRN1P58418 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC4.76□□□□□ -1.65
CLRN1P58418 RGS5-217ENST00000451759 835 ntTSL 3 BASIC4.76□□□□□ -1.65
CLRN1P58418 Z82190.1-201ENST00000454534 490 ntBASIC4.76□□□□□ -1.65
CLRN1P58418 OFD1P4Y-201ENST00000455273 1179 ntBASIC4.76□□□□□ -1.65
CLRN1P58418 MTCO1P42-201ENST00000457379 726 ntBASIC4.76□□□□□ -1.65
CLRN1P58418 AC026410.2-201ENST00000460281 156 ntBASIC4.76□□□□□ -1.65
CLRN1P58418 AL672167.3-201ENST00000465951 960 ntBASIC4.76□□□□□ -1.65
CLRN1P58418 AC092989.1-201ENST00000481235 277 ntBASIC4.76□□□□□ -1.65
CLRN1P58418 RN7SL447P-201ENST00000494711 245 ntBASIC4.76□□□□□ -1.65
CLRN1P58418 RN7SL466P-201ENST00000497546 295 ntBASIC4.76□□□□□ -1.65
CLRN1P58418 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC4.76□□□□□ -1.65
CLRN1P58418 AC022447.3-201ENST00000506865 495 ntBASIC4.76□□□□□ -1.65
CLRN1P58418 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms