Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.98□□□□□ -1.61
PER3P56645 AL118522.2-201ENST00000616045 615 ntBASIC4.98□□□□□ -1.61
PER3P56645 AC099654.12-201ENST00000639868 649 ntBASIC4.98□□□□□ -1.61
PER3P56645 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC4.98□□□□□ -1.61
PER3P56645 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
PER3P56645 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PER3P56645 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PER3P56645 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
PER3P56645 ABCC13-202ENST00000463099 3842 ntBASIC4.98□□□□□ -1.61
PER3P56645 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.97□□□□□ -1.61
PER3P56645 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
PER3P56645 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.97□□□□□ -1.61
PER3P56645 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
PER3P56645 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
PER3P56645 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
PER3P56645 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
PER3P56645 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
PER3P56645 PCAT14-202ENST00000627127 3935 ntBASIC4.97□□□□□ -1.61
PER3P56645 RNA5SP335-201ENST00000363817 110 ntBASIC4.97□□□□□ -1.61
PER3P56645 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
PER3P56645 RNU6-441P-201ENST00000384545 106 ntBASIC4.97□□□□□ -1.61
PER3P56645 DSTNP4-201ENST00000399472 474 ntBASIC4.97□□□□□ -1.61
PER3P56645 AC025750.1-201ENST00000399891 379 ntBASIC4.97□□□□□ -1.61
PER3P56645 AL009179.1-201ENST00000406085 265 ntBASIC4.97□□□□□ -1.61
PER3P56645 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4.97□□□□□ -1.61
PER3P56645 OFD1P18Y-201ENST00000420889 959 ntBASIC4.97□□□□□ -1.61
PER3P56645 AC099336.2-201ENST00000422457 254 ntBASIC4.97□□□□□ -1.61
PER3P56645 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
PER3P56645 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.97□□□□□ -1.61
PER3P56645 RPL36P19-201ENST00000430744 301 ntBASIC4.97□□□□□ -1.61
PER3P56645 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC4.97□□□□□ -1.61
PER3P56645 RPL21P133-201ENST00000443666 476 ntBASIC4.97□□□□□ -1.61
PER3P56645 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.97□□□□□ -1.61
PER3P56645 AC105399.1-202ENST00000447303 205 ntBASIC4.97□□□□□ -1.61
PER3P56645 MTCO1P27-201ENST00000448269 226 ntBASIC4.97□□□□□ -1.61
PER3P56645 NANOGNBP1-201ENST00000448444 480 ntBASIC4.97□□□□□ -1.61
PER3P56645 AC093392.2-201ENST00000450682 337 ntBASIC4.97□□□□□ -1.61
PER3P56645 AL389915.2-201ENST00000454576 441 ntBASIC4.97□□□□□ -1.61
PER3P56645 AC099560.2-201ENST00000457554 255 ntBASIC4.97□□□□□ -1.61
PER3P56645 SNORD42A-201ENST00000459584 64 ntBASIC4.97□□□□□ -1.61
PER3P56645 GYG1P1-201ENST00000460864 698 ntBASIC4.97□□□□□ -1.61
PER3P56645 FTH1P2-201ENST00000466086 412 ntBASIC4.97□□□□□ -1.61
PER3P56645 AC007686.1-201ENST00000488511 463 ntBASIC4.97□□□□□ -1.61
PER3P56645 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC4.97□□□□□ -1.61
PER3P56645 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC4.97□□□□□ -1.61
PER3P56645 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC4.97□□□□□ -1.61
PER3P56645 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
PER3P56645 AC109464.2-201ENST00000510242 943 ntBASIC4.97□□□□□ -1.61
PER3P56645 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
PER3P56645 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC4.97□□□□□ -1.61
PER3P56645 GAPDHP62-201ENST00000515313 990 ntBASIC4.97□□□□□ -1.61
PER3P56645 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.97□□□□□ -1.61
PER3P56645 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC4.97□□□□□ -1.61
PER3P56645 LARP7P2-201ENST00000575306 125 ntBASIC4.97□□□□□ -1.61
PER3P56645 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC4.97□□□□□ -1.61
PER3P56645 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC4.97□□□□□ -1.61
PER3P56645 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.97□□□□□ -1.61
PER3P56645 SEPT7P9-203ENST00000604116 343 ntBASIC4.97□□□□□ -1.61
PER3P56645 AL133338.2-201ENST00000604292 736 ntBASIC4.97□□□□□ -1.61
PER3P56645 AC133644.2-201ENST00000608142 540 ntBASIC4.97□□□□□ -1.61
PER3P56645 AL121890.2-201ENST00000617644 465 ntBASIC4.97□□□□□ -1.61
PER3P56645 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.97□□□□□ -1.61
PER3P56645 AL353662.3-201ENST00000625131 237 ntBASIC4.97□□□□□ -1.61
PER3P56645 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.97□□□□□ -1.61
PER3P56645 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
PER3P56645 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.97□□□□□ -1.61
PER3P56645 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
PER3P56645 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
PER3P56645 AL022322.2-201ENST00000624072 20397 ntBASIC4.97□□□□□ -1.61
PER3P56645 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
PER3P56645 AC114947.2-201ENST00000565748 2125 ntBASIC4.97□□□□□ -1.61
PER3P56645 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
PER3P56645 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.97□□□□□ -1.61
PER3P56645 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
PER3P56645 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
PER3P56645 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
PER3P56645 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
PER3P56645 SCARNA15-201ENST00000607520 4325 ntBASIC4.96□□□□□ -1.61
PER3P56645 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.96□□□□□ -1.61
PER3P56645 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.61
PER3P56645 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.61
PER3P56645 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
PER3P56645 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
PER3P56645 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
PER3P56645 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
PER3P56645 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
PER3P56645 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC4.96□□□□□ -1.62
PER3P56645 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
PER3P56645 RNU5E-5P-201ENST00000365379 116 ntBASIC4.96□□□□□ -1.62
PER3P56645 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
PER3P56645 RNU6-259P-201ENST00000383999 107 ntBASIC4.96□□□□□ -1.62
PER3P56645 RNA5SP91-201ENST00000390902 119 ntBASIC4.96□□□□□ -1.62
PER3P56645 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.96□□□□□ -1.62
PER3P56645 RNU6ATAC25P-201ENST00000408798 117 ntBASIC4.96□□□□□ -1.62
PER3P56645 RNU6-248P-201ENST00000410720 107 ntBASIC4.96□□□□□ -1.62
PER3P56645 HMGN1P14-201ENST00000412459 517 ntBASIC4.96□□□□□ -1.62
PER3P56645 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.96□□□□□ -1.62
PER3P56645 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC4.96□□□□□ -1.62
PER3P56645 IPMKP1-201ENST00000425988 855 ntBASIC4.96□□□□□ -1.62
PER3P56645 RPL37P21-201ENST00000435890 276 ntBASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms