Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC4.18□□□□□ -1.74
PEX3P56589 RPS27P5-201ENST00000444247 244 ntBASIC4.18□□□□□ -1.74
PEX3P56589 CDC27P1-201ENST00000445384 715 ntBASIC4.18□□□□□ -1.74
PEX3P56589 CLIC4P1-201ENST00000453177 535 ntBASIC4.18□□□□□ -1.74
PEX3P56589 CYCSP20-201ENST00000473154 315 ntBASIC4.18□□□□□ -1.74
PEX3P56589 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC4.18□□□□□ -1.74
PEX3P56589 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC4.18□□□□□ -1.74
PEX3P56589 RNA5SP164-201ENST00000516533 110 ntBASIC4.18□□□□□ -1.74
PEX3P56589 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC4.18□□□□□ -1.74
PEX3P56589 AP003102.1-201ENST00000525638 661 ntBASIC4.18□□□□□ -1.74
PEX3P56589 C1DP5-201ENST00000525775 383 ntBASIC4.18□□□□□ -1.74
PEX3P56589 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC4.18□□□□□ -1.74
PEX3P56589 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.18□□□□□ -1.74
PEX3P56589 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.18□□□□□ -1.74
PEX3P56589 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.18□□□□□ -1.74
PEX3P56589 AC006130.2-201ENST00000586202 326 ntBASIC4.18□□□□□ -1.74
PEX3P56589 AL137849.1-201ENST00000604767 169 ntBASIC4.18□□□□□ -1.74
PEX3P56589 SNORA62.6-201ENST00000606322 83 ntBASIC4.18□□□□□ -1.74
PEX3P56589 AC145207.9-201ENST00000623802 325 ntBASIC4.18□□□□□ -1.74
PEX3P56589 METTL8-219ENST00000640734 726 ntTSL 2 BASIC4.18□□□□□ -1.74
PEX3P56589 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC4.18□□□□□ -1.74
PEX3P56589 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
PEX3P56589 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
PEX3P56589 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PEX3P56589 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PEX3P56589 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.18□□□□□ -1.74
PEX3P56589 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PEX3P56589 AC095050.2-201ENST00000510748 1458 ntBASIC4.18□□□□□ -1.74
PEX3P56589 AL592494.2-201ENST00000425455 1548 ntBASIC4.17□□□□□ -1.74
PEX3P56589 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
PEX3P56589 BDP1P-201ENST00000582658 1990 ntBASIC4.17□□□□□ -1.74
PEX3P56589 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
PEX3P56589 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
PEX3P56589 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
PEX3P56589 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
PEX3P56589 U8.11-201ENST00000384699 133 ntBASIC4.17□□□□□ -1.74
PEX3P56589 U8.12-201ENST00000384701 133 ntBASIC4.17□□□□□ -1.74
PEX3P56589 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
PEX3P56589 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
PEX3P56589 AL035405.1-201ENST00000400795 710 ntBASIC4.17□□□□□ -1.74
PEX3P56589 TATDN1P1-201ENST00000414123 891 ntBASIC4.17□□□□□ -1.74
PEX3P56589 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC4.17□□□□□ -1.74
PEX3P56589 RPS6P12-201ENST00000432491 726 ntBASIC4.17□□□□□ -1.74
PEX3P56589 PTP4A1P3-201ENST00000433661 420 ntBASIC4.17□□□□□ -1.74
PEX3P56589 MOB1AP2-201ENST00000446060 614 ntBASIC4.17□□□□□ -1.74
PEX3P56589 AL500522.2-201ENST00000448562 343 ntBASIC4.17□□□□□ -1.74
PEX3P56589 NANOGP10-201ENST00000453325 895 ntBASIC4.17□□□□□ -1.74
PEX3P56589 MTND2P39-201ENST00000457230 764 ntBASIC4.17□□□□□ -1.74
PEX3P56589 UBDP1-202ENST00000457888 382 ntBASIC4.17□□□□□ -1.74
PEX3P56589 U8.18-201ENST00000459285 133 ntBASIC4.17□□□□□ -1.74
PEX3P56589 RPL32P14-201ENST00000463196 378 ntBASIC4.17□□□□□ -1.74
PEX3P56589 AC021205.1-201ENST00000468797 348 ntBASIC4.17□□□□□ -1.74
PEX3P56589 SETP6-201ENST00000479329 568 ntBASIC4.17□□□□□ -1.74
PEX3P56589 AC069499.1-201ENST00000489433 509 ntBASIC4.17□□□□□ -1.74
PEX3P56589 HAUS1P1-201ENST00000505275 832 ntBASIC4.17□□□□□ -1.74
PEX3P56589 AC112198.4-201ENST00000515450 351 ntBASIC4.17□□□□□ -1.74
PEX3P56589 RNU1-45P-201ENST00000517191 141 ntBASIC4.17□□□□□ -1.74
PEX3P56589 MAL2-205ENST00000521048 575 ntTSL 4 BASIC4.17□□□□□ -1.74
PEX3P56589 AC019227.1-201ENST00000526902 510 ntBASIC4.17□□□□□ -1.74
PEX3P56589 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC4.17□□□□□ -1.74
PEX3P56589 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC4.17□□□□□ -1.74
PEX3P56589 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4.17□□□□□ -1.74
PEX3P56589 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.17□□□□□ -1.74
PEX3P56589 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC4.17□□□□□ -1.74
PEX3P56589 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.17□□□□□ -1.74
PEX3P56589 ABI1P1-201ENST00000603375 1120 ntBASIC4.17□□□□□ -1.74
PEX3P56589 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.17□□□□□ -1.74
PEX3P56589 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC4.17□□□□□ -1.74
PEX3P56589 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC4.17□□□□□ -1.74
PEX3P56589 AC007342.8-201ENST00000623278 678 ntBASIC4.17□□□□□ -1.74
PEX3P56589 AL356863.1-201ENST00000623378 1080 ntBASIC4.17□□□□□ -1.74
PEX3P56589 AL359715.5-201ENST00000623431 443 ntBASIC4.17□□□□□ -1.74
PEX3P56589 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.17□□□□□ -1.74
PEX3P56589 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.17□□□□□ -1.74
PEX3P56589 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
PEX3P56589 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
PEX3P56589 AC008432.1-201ENST00000615912 1320 ntBASIC4.17□□□□□ -1.74
PEX3P56589 MFSD8-213ENST00000641134 1327 ntBASIC4.17□□□□□ -1.74
PEX3P56589 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.16□□□□□ -1.74
PEX3P56589 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.16□□□□□ -1.74
PEX3P56589 AC017007.4-201ENST00000503353 1352 ntBASIC4.16□□□□□ -1.74
PEX3P56589 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
PEX3P56589 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
PEX3P56589 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
PEX3P56589 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
PEX3P56589 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
PEX3P56589 RNU6-666P-201ENST00000363499 107 ntBASIC4.16□□□□□ -1.74
PEX3P56589 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
PEX3P56589 SOD2P1-201ENST00000396543 562 ntBASIC4.16□□□□□ -1.74
PEX3P56589 HLFP1-201ENST00000402375 499 ntBASIC4.16□□□□□ -1.74
PEX3P56589 NCSTNP1-201ENST00000406229 144 ntBASIC4.16□□□□□ -1.74
PEX3P56589 UQCRFS1P3-201ENST00000407697 385 ntBASIC4.16□□□□□ -1.74
PEX3P56589 LSM5-205ENST00000409952 687 ntTSL 4 BASIC4.16□□□□□ -1.74
PEX3P56589 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.16□□□□□ -1.74
PEX3P56589 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.16□□□□□ -1.74
PEX3P56589 AC093698.1-201ENST00000423843 571 ntBASIC4.16□□□□□ -1.74
PEX3P56589 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC4.16□□□□□ -1.74
PEX3P56589 AL096829.2-201ENST00000446582 742 ntBASIC4.16□□□□□ -1.74
PEX3P56589 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.16□□□□□ -1.74
PEX3P56589 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms