Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CDH4P55283 PTP4A1P6-201ENST00000531034 478 ntBASIC3.92□□□□□ -1.78
CDH4P55283 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.92□□□□□ -1.78
CDH4P55283 AC025260.1-201ENST00000548858 430 ntBASIC3.92□□□□□ -1.78
CDH4P55283 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.92□□□□□ -1.78
CDH4P55283 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.92□□□□□ -1.78
CDH4P55283 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC3.92□□□□□ -1.78
CDH4P55283 AC090877.1-201ENST00000561418 344 ntBASIC3.92□□□□□ -1.78
CDH4P55283 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.92□□□□□ -1.78
CDH4P55283 AC006130.2-201ENST00000586202 326 ntBASIC3.92□□□□□ -1.78
CDH4P55283 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC3.92□□□□□ -1.78
CDH4P55283 AC083899.3-201ENST00000603413 594 ntBASIC3.92□□□□□ -1.78
CDH4P55283 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC3.92□□□□□ -1.78
CDH4P55283 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC3.92□□□□□ -1.78
CDH4P55283 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC3.92□□□□□ -1.78
CDH4P55283 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.92□□□□□ -1.78
CDH4P55283 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CDH4P55283 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CDH4P55283 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CDH4P55283 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CDH4P55283 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CDH4P55283 AC138393.1-206ENST00000540997 1886 ntBASIC3.92□□□□□ -1.78
CDH4P55283 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CDH4P55283 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CDH4P55283 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CDH4P55283 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CDH4P55283 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.91□□□□□ -1.78
CDH4P55283 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
CDH4P55283 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CDH4P55283 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.91□□□□□ -1.78
CDH4P55283 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CDH4P55283 RNA5SP391-201ENST00000363456 119 ntBASIC3.91□□□□□ -1.78
CDH4P55283 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.91□□□□□ -1.78
CDH4P55283 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
CDH4P55283 RNU6-98P-201ENST00000384173 107 ntBASIC3.91□□□□□ -1.78
CDH4P55283 MIR134-201ENST00000385258 73 ntBASIC3.91□□□□□ -1.78
CDH4P55283 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CDH4P55283 AC092647.1-201ENST00000420654 287 ntBASIC3.91□□□□□ -1.78
CDH4P55283 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.91□□□□□ -1.78
CDH4P55283 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC3.91□□□□□ -1.78
CDH4P55283 RPL7P29-201ENST00000437151 728 ntBASIC3.91□□□□□ -1.78
CDH4P55283 PPIAP17-201ENST00000438507 471 ntBASIC3.91□□□□□ -1.78
CDH4P55283 MTCO1P14-201ENST00000441695 1559 ntBASIC3.91□□□□□ -1.78
CDH4P55283 MTCYBP21-201ENST00000443300 1113 ntBASIC3.91□□□□□ -1.78
CDH4P55283 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC3.91□□□□□ -1.78
CDH4P55283 SETD6P1-201ENST00000444575 317 ntBASIC3.91□□□□□ -1.78
CDH4P55283 CDC27P1-201ENST00000445384 715 ntBASIC3.91□□□□□ -1.78
CDH4P55283 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC3.91□□□□□ -1.78
CDH4P55283 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.91□□□□□ -1.78
CDH4P55283 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.91□□□□□ -1.78
CDH4P55283 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
CDH4P55283 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC3.91□□□□□ -1.78
CDH4P55283 IGKV2D-23-201ENST00000518179 286 ntBASIC3.91□□□□□ -1.78
CDH4P55283 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.91□□□□□ -1.78
CDH4P55283 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC3.91□□□□□ -1.78
CDH4P55283 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.91□□□□□ -1.78
CDH4P55283 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC3.91□□□□□ -1.78
CDH4P55283 AC004923.2-201ENST00000529649 369 ntBASIC3.91□□□□□ -1.78
CDH4P55283 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.91□□□□□ -1.78
CDH4P55283 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC3.91□□□□□ -1.78
CDH4P55283 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.91□□□□□ -1.78
CDH4P55283 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
CDH4P55283 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.91□□□□□ -1.78
CDH4P55283 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.91□□□□□ -1.78
CDH4P55283 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.91□□□□□ -1.78
CDH4P55283 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.91□□□□□ -1.78
CDH4P55283 AK6-205ENST00000618980 483 ntTSL 2 BASIC3.91□□□□□ -1.78
CDH4P55283 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC3.91□□□□□ -1.78
CDH4P55283 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CDH4P55283 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CDH4P55283 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.91□□□□□ -1.78
CDH4P55283 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
CDH4P55283 BDP1P-201ENST00000582658 1990 ntBASIC3.91□□□□□ -1.78
CDH4P55283 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
CDH4P55283 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
CDH4P55283 MAPK10-373ENST00000641983 6772 ntBASIC3.9□□□□□ -1.78
CDH4P55283 POMP-202ENST00000460403 1428 ntTSL 3 BASIC3.9□□□□□ -1.78
CDH4P55283 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
CDH4P55283 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CDH4P55283 HLFP1-201ENST00000402375 499 ntBASIC3.9□□□□□ -1.79
CDH4P55283 AL590704.1-201ENST00000402856 794 ntBASIC3.9□□□□□ -1.79
CDH4P55283 HNRNPDP2-201ENST00000406475 478 ntBASIC3.9□□□□□ -1.79
CDH4P55283 MTATP6P31-201ENST00000406985 692 ntBASIC3.9□□□□□ -1.79
CDH4P55283 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
CDH4P55283 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC3.9□□□□□ -1.79
CDH4P55283 OR5AW1P-201ENST00000426334 1006 ntBASIC3.9□□□□□ -1.79
CDH4P55283 AC007389.2-201ENST00000434630 306 ntBASIC3.9□□□□□ -1.79
CDH4P55283 XKRY2-201ENST00000442362 1093 ntBASIC3.9□□□□□ -1.79
CDH4P55283 NANOGP10-201ENST00000453325 895 ntBASIC3.9□□□□□ -1.79
CDH4P55283 AL133477.1-201ENST00000457472 514 ntBASIC3.9□□□□□ -1.79
CDH4P55283 AC084198.1-201ENST00000477747 402 ntBASIC3.9□□□□□ -1.79
CDH4P55283 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.9□□□□□ -1.79
CDH4P55283 USP9YP5-201ENST00000511770 630 ntBASIC3.9□□□□□ -1.79
CDH4P55283 MTCO1P49-201ENST00000523429 802 ntBASIC3.9□□□□□ -1.79
CDH4P55283 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.9□□□□□ -1.79
CDH4P55283 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC3.9□□□□□ -1.79
CDH4P55283 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC3.9□□□□□ -1.79
CDH4P55283 AC115621.1-201ENST00000604653 858 ntBASIC3.9□□□□□ -1.79
CDH4P55283 AL137849.1-201ENST00000604767 169 ntBASIC3.9□□□□□ -1.79
CDH4P55283 AP003117.2-201ENST00000606010 545 ntBASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 123.8 ms