Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 AL121873.1-201ENST00000616013 524 ntBASIC4.34□□□□□ -1.71
SOX2P48431 AC009509.4-201ENST00000619202 509 ntBASIC4.34□□□□□ -1.71
SOX2P48431 AL356596.1-201ENST00000624230 379 ntBASIC4.34□□□□□ -1.71
SOX2P48431 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC4.34□□□□□ -1.71
SOX2P48431 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC4.34□□□□□ -1.71
SOX2P48431 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.34□□□□□ -1.71
SOX2P48431 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC4.34□□□□□ -1.71
SOX2P48431 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SOX2P48431 MTND4P4-201ENST00000439033 1366 ntBASIC4.34□□□□□ -1.71
SOX2P48431 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
SOX2P48431 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
SOX2P48431 PANDAR-201ENST00000629595 1506 ntBASIC4.34□□□□□ -1.71
SOX2P48431 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.34□□□□□ -1.71
SOX2P48431 SCN1A-220ENST00000641603 12506 ntBASIC4.34□□□□□ -1.71
SOX2P48431 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SOX2P48431 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
SOX2P48431 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
SOX2P48431 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.34□□□□□ -1.72
SOX2P48431 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
SOX2P48431 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
SOX2P48431 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
SOX2P48431 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
SOX2P48431 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
SOX2P48431 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
SOX2P48431 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SOX2P48431 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
SOX2P48431 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.33□□□□□ -1.72
SOX2P48431 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.33□□□□□ -1.72
SOX2P48431 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC4.33□□□□□ -1.72
SOX2P48431 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SOX2P48431 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
SOX2P48431 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.33□□□□□ -1.72
SOX2P48431 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC4.33□□□□□ -1.72
SOX2P48431 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SOX2P48431 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.33□□□□□ -1.72
SOX2P48431 PABPC1P9-201ENST00000426076 1612 ntBASIC4.33□□□□□ -1.72
SOX2P48431 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SOX2P48431 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
SOX2P48431 CYP1D1P-201ENST00000416662 1433 ntBASIC4.33□□□□□ -1.72
SOX2P48431 AC135352.1-201ENST00000506173 1418 ntBASIC4.33□□□□□ -1.72
SOX2P48431 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
SOX2P48431 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SOX2P48431 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.33□□□□□ -1.72
SOX2P48431 RNU6-433P-201ENST00000363216 104 ntBASIC4.33□□□□□ -1.72
SOX2P48431 RNU5F-7P-201ENST00000363696 115 ntBASIC4.33□□□□□ -1.72
SOX2P48431 RNU1-85P-201ENST00000364127 164 ntBASIC4.33□□□□□ -1.72
SOX2P48431 RNU6-723P-201ENST00000383973 107 ntBASIC4.33□□□□□ -1.72
SOX2P48431 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
SOX2P48431 SNRPEP2-201ENST00000397592 279 ntBASIC4.33□□□□□ -1.72
SOX2P48431 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC4.33□□□□□ -1.72
SOX2P48431 DSTNP4-201ENST00000399472 474 ntBASIC4.33□□□□□ -1.72
SOX2P48431 AC009804.1-201ENST00000400949 179 ntBASIC4.33□□□□□ -1.72
SOX2P48431 AL592291.1-201ENST00000403830 352 ntBASIC4.33□□□□□ -1.72
SOX2P48431 SNORA11.5-201ENST00000408163 128 ntBASIC4.33□□□□□ -1.72
SOX2P48431 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.33□□□□□ -1.72
SOX2P48431 CDK8P2-201ENST00000415020 547 ntBASIC4.33□□□□□ -1.72
SOX2P48431 AC083875.1-201ENST00000419509 405 ntBASIC4.33□□□□□ -1.72
SOX2P48431 AC099336.2-201ENST00000422457 254 ntBASIC4.33□□□□□ -1.72
SOX2P48431 RGS17P1-201ENST00000423358 553 ntBASIC4.33□□□□□ -1.72
SOX2P48431 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.33□□□□□ -1.72
SOX2P48431 EIF4HP2-201ENST00000424380 563 ntBASIC4.33□□□□□ -1.72
SOX2P48431 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC4.33□□□□□ -1.72
SOX2P48431 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC4.33□□□□□ -1.72
SOX2P48431 USP9YP14-201ENST00000430663 563 ntBASIC4.33□□□□□ -1.72
SOX2P48431 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC4.33□□□□□ -1.72
SOX2P48431 AC092162.1-201ENST00000432828 434 ntBASIC4.33□□□□□ -1.72
SOX2P48431 RPS24P1-201ENST00000438550 371 ntBASIC4.33□□□□□ -1.72
SOX2P48431 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.33□□□□□ -1.72
SOX2P48431 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC4.33□□□□□ -1.72
SOX2P48431 AL161636.2-201ENST00000445179 927 ntBASIC4.33□□□□□ -1.72
SOX2P48431 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.33□□□□□ -1.72
SOX2P48431 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.33□□□□□ -1.72
SOX2P48431 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC4.33□□□□□ -1.72
SOX2P48431 RPL31P15-201ENST00000449770 338 ntBASIC4.33□□□□□ -1.72
SOX2P48431 TRGVB-201ENST00000453257 471 ntBASIC4.33□□□□□ -1.72
SOX2P48431 AC099560.2-201ENST00000457554 255 ntBASIC4.33□□□□□ -1.72
SOX2P48431 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC4.33□□□□□ -1.72
SOX2P48431 RNA5SP269-201ENST00000459032 137 ntBASIC4.33□□□□□ -1.72
SOX2P48431 RPS17P2-201ENST00000461663 408 ntBASIC4.33□□□□□ -1.72
SOX2P48431 AC009127.1-201ENST00000467090 155 ntBASIC4.33□□□□□ -1.72
SOX2P48431 AC092757.1-201ENST00000467293 467 ntBASIC4.33□□□□□ -1.72
SOX2P48431 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.33□□□□□ -1.72
SOX2P48431 RAD51AP1P1-201ENST00000484195 1001 ntBASIC4.33□□□□□ -1.72
SOX2P48431 AC020890.1-201ENST00000491837 504 ntBASIC4.33□□□□□ -1.72
SOX2P48431 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.33□□□□□ -1.72
SOX2P48431 AC109458.1-201ENST00000508858 316 ntBASIC4.33□□□□□ -1.72
SOX2P48431 AC026412.2-201ENST00000512270 1075 ntBASIC4.33□□□□□ -1.72
SOX2P48431 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC4.33□□□□□ -1.72
SOX2P48431 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC4.33□□□□□ -1.72
SOX2P48431 IGHVII-60-1-201ENST00000519079 256 ntBASIC4.33□□□□□ -1.72
SOX2P48431 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC4.33□□□□□ -1.72
SOX2P48431 AP000790.1-201ENST00000528891 737 ntBASIC4.33□□□□□ -1.72
SOX2P48431 OR4A12P-201ENST00000530847 918 ntBASIC4.33□□□□□ -1.72
SOX2P48431 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.33□□□□□ -1.72
SOX2P48431 OR6C7P-201ENST00000547875 934 ntBASIC4.33□□□□□ -1.72
SOX2P48431 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC4.33□□□□□ -1.72
SOX2P48431 AC087477.6-201ENST00000559595 843 ntBASIC4.33□□□□□ -1.72
SOX2P48431 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.33□□□□□ -1.72
SOX2P48431 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC4.33□□□□□ -1.72
SOX2P48431 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms