Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC3.79□□□□□ -1.8
NKX2-1P43699 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
NKX2-1P43699 GTF2IP8-201ENST00000560687 584 ntBASIC3.79□□□□□ -1.8
NKX2-1P43699 SULT1C2P1-202ENST00000562418 459 ntBASIC3.79□□□□□ -1.8
NKX2-1P43699 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.79□□□□□ -1.8
NKX2-1P43699 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC3.79□□□□□ -1.8
NKX2-1P43699 AC011447.4-201ENST00000587562 111 ntBASIC3.79□□□□□ -1.8
NKX2-1P43699 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC3.79□□□□□ -1.8
NKX2-1P43699 AC021171.1-201ENST00000603137 706 ntBASIC3.79□□□□□ -1.8
NKX2-1P43699 SUMO2P15-201ENST00000604285 278 ntBASIC3.79□□□□□ -1.8
NKX2-1P43699 AL360219.1-201ENST00000610230 366 ntBASIC3.79□□□□□ -1.8
NKX2-1P43699 AC022467.1-201ENST00000614738 749 ntBASIC3.79□□□□□ -1.8
NKX2-1P43699 AL138721.1-201ENST00000616756 179 ntBASIC3.79□□□□□ -1.8
NKX2-1P43699 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
NKX2-1P43699 UOX-205ENST00000640983 544 ntTSL 4 BASIC3.79□□□□□ -1.8
NKX2-1P43699 AL592182.3-201ENST00000642132 3304 ntBASIC3.79□□□□□ -1.8
NKX2-1P43699 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
NKX2-1P43699 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.79□□□□□ -1.8
NKX2-1P43699 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
NKX2-1P43699 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
NKX2-1P43699 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC3.78□□□□□ -1.8
NKX2-1P43699 AL592148.3-201ENST00000608771 2646 ntBASIC3.78□□□□□ -1.8
NKX2-1P43699 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.78□□□□□ -1.8
NKX2-1P43699 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.78□□□□□ -1.8
NKX2-1P43699 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.78□□□□□ -1.8
NKX2-1P43699 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
NKX2-1P43699 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC3.78□□□□□ -1.8
NKX2-1P43699 SNORA70E-201ENST00000384492 135 ntBASIC3.78□□□□□ -1.8
NKX2-1P43699 HSPD1P16-201ENST00000402302 394 ntBASIC3.78□□□□□ -1.8
NKX2-1P43699 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC3.78□□□□□ -1.8
NKX2-1P43699 AL160275.2-201ENST00000412010 394 ntBASIC3.78□□□□□ -1.8
NKX2-1P43699 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC3.78□□□□□ -1.8
NKX2-1P43699 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC3.78□□□□□ -1.8
NKX2-1P43699 RPL31P45-201ENST00000419532 356 ntBASIC3.78□□□□□ -1.8
NKX2-1P43699 AC079355.1-201ENST00000421770 223 ntBASIC3.78□□□□□ -1.8
NKX2-1P43699 MTCO3P1-205ENST00000422088 832 ntBASIC3.78□□□□□ -1.8
NKX2-1P43699 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.78□□□□□ -1.8
NKX2-1P43699 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC3.78□□□□□ -1.8
NKX2-1P43699 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC3.78□□□□□ -1.8
NKX2-1P43699 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC3.78□□□□□ -1.8
NKX2-1P43699 YWHAZP7-201ENST00000436906 631 ntBASIC3.78□□□□□ -1.8
NKX2-1P43699 RPL23AP16-201ENST00000441715 421 ntBASIC3.78□□□□□ -1.8
NKX2-1P43699 CEACAMP9-201ENST00000442990 513 ntBASIC3.78□□□□□ -1.8
NKX2-1P43699 SETD6P1-201ENST00000444575 317 ntBASIC3.78□□□□□ -1.8
NKX2-1P43699 AURKAPS1-201ENST00000451805 1212 ntBASIC3.78□□□□□ -1.8
NKX2-1P43699 BX276092.4-201ENST00000452056 248 ntBASIC3.78□□□□□ -1.8
NKX2-1P43699 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC3.78□□□□□ -1.8
NKX2-1P43699 AL133477.1-201ENST00000457472 514 ntBASIC3.78□□□□□ -1.8
NKX2-1P43699 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC3.78□□□□□ -1.8
NKX2-1P43699 AC010469.1-201ENST00000463864 576 ntBASIC3.78□□□□□ -1.8
NKX2-1P43699 AC090142.1-201ENST00000465776 462 ntBASIC3.78□□□□□ -1.8
NKX2-1P43699 AC079841.1-201ENST00000481228 950 ntBASIC3.78□□□□□ -1.8
NKX2-1P43699 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.78□□□□□ -1.8
NKX2-1P43699 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC3.78□□□□□ -1.8
NKX2-1P43699 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.78□□□□□ -1.8
NKX2-1P43699 WBP1LP4-201ENST00000505043 344 ntBASIC3.78□□□□□ -1.8
NKX2-1P43699 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC3.78□□□□□ -1.8
NKX2-1P43699 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.78□□□□□ -1.8
NKX2-1P43699 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC3.78□□□□□ -1.8
NKX2-1P43699 AC079395.1-201ENST00000510981 262 ntBASIC3.78□□□□□ -1.8
NKX2-1P43699 IGKV1OR2-1-201ENST00000514060 354 ntBASIC3.78□□□□□ -1.8
NKX2-1P43699 RNA5SP154-201ENST00000516193 111 ntBASIC3.78□□□□□ -1.8
NKX2-1P43699 RNU1-6P-201ENST00000516290 144 ntBASIC3.78□□□□□ -1.8
NKX2-1P43699 RN7SKP277-201ENST00000516895 283 ntBASIC3.78□□□□□ -1.8
NKX2-1P43699 SNORA48.10-201ENST00000516965 160 ntBASIC3.78□□□□□ -1.8
NKX2-1P43699 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC3.78□□□□□ -1.8
NKX2-1P43699 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC3.78□□□□□ -1.8
NKX2-1P43699 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC3.78□□□□□ -1.8
NKX2-1P43699 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC3.78□□□□□ -1.8
NKX2-1P43699 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.78□□□□□ -1.8
NKX2-1P43699 EMP1-206ENST00000537612 505 ntTSL 3 BASIC3.78□□□□□ -1.8
NKX2-1P43699 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC3.78□□□□□ -1.8
NKX2-1P43699 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.78□□□□□ -1.8
NKX2-1P43699 AC010198.2-201ENST00000550612 259 ntBASIC3.78□□□□□ -1.8
NKX2-1P43699 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC3.78□□□□□ -1.8
NKX2-1P43699 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC3.78□□□□□ -1.8
NKX2-1P43699 AC109446.2-201ENST00000567872 497 ntBASIC3.78□□□□□ -1.8
NKX2-1P43699 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC3.78□□□□□ -1.8
NKX2-1P43699 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
NKX2-1P43699 AC018638.7-201ENST00000605836 1114 ntBASIC3.78□□□□□ -1.8
NKX2-1P43699 AC015813.4-201ENST00000610469 179 ntBASIC3.78□□□□□ -1.8
NKX2-1P43699 AC073348.1-201ENST00000623002 331 ntBASIC3.78□□□□□ -1.8
NKX2-1P43699 AC091905.2-201ENST00000623143 306 ntBASIC3.78□□□□□ -1.8
NKX2-1P43699 AC112694.2-201ENST00000623697 768 ntBASIC3.78□□□□□ -1.8
NKX2-1P43699 CR381572.2-201ENST00000624852 397 ntBASIC3.78□□□□□ -1.8
NKX2-1P43699 AC017037.3-201ENST00000625016 472 ntBASIC3.78□□□□□ -1.8
NKX2-1P43699 PABPC1P6-201ENST00000445594 1829 ntBASIC3.78□□□□□ -1.8
NKX2-1P43699 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.78□□□□□ -1.8
NKX2-1P43699 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC3.78□□□□□ -1.8
NKX2-1P43699 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
NKX2-1P43699 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
NKX2-1P43699 AC099654.2-201ENST00000433031 1980 ntBASIC3.78□□□□□ -1.8
NKX2-1P43699 AL133243.3-201ENST00000617415 3004 ntBASIC3.78□□□□□ -1.8
NKX2-1P43699 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.78□□□□□ -1.8
NKX2-1P43699 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.78□□□□□ -1.81
NKX2-1P43699 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.78□□□□□ -1.81
NKX2-1P43699 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.77□□□□□ -1.81
NKX2-1P43699 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
NKX2-1P43699 THAP12P4-201ENST00000528321 2266 ntBASIC3.77□□□□□ -1.81
NKX2-1P43699 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 124.8 ms