Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 AC243654.2-201ENST00000612843 443 ntBASIC3.75□□□□□ -1.81
SHMT2P34897 AC005344.1-201ENST00000613391 459 ntBASIC3.75□□□□□ -1.81
SHMT2P34897 AC099669.2-201ENST00000616549 437 ntBASIC3.75□□□□□ -1.81
SHMT2P34897 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SHMT2P34897 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.75□□□□□ -1.81
SHMT2P34897 UBE3AP2-201ENST00000429033 2259 ntBASIC3.75□□□□□ -1.81
SHMT2P34897 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.75□□□□□ -1.81
SHMT2P34897 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
SHMT2P34897 MTND4P10-201ENST00000446199 1363 ntBASIC3.75□□□□□ -1.81
SHMT2P34897 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SHMT2P34897 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.75□□□□□ -1.81
SHMT2P34897 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
SHMT2P34897 AP004289.2-201ENST00000444413 1457 ntBASIC3.74□□□□□ -1.81
SHMT2P34897 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.74□□□□□ -1.81
SHMT2P34897 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.74□□□□□ -1.81
SHMT2P34897 RAD1P1-201ENST00000231383 813 ntBASIC3.74□□□□□ -1.81
SHMT2P34897 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
SHMT2P34897 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC3.74□□□□□ -1.81
SHMT2P34897 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC3.74□□□□□ -1.81
SHMT2P34897 TAF9BP2-201ENST00000400856 499 ntBASIC3.74□□□□□ -1.81
SHMT2P34897 AL138878.1-201ENST00000405131 347 ntBASIC3.74□□□□□ -1.81
SHMT2P34897 TRGV6-201ENST00000417928 299 ntBASIC3.74□□□□□ -1.81
SHMT2P34897 LINC01347-201ENST00000417964 355 ntBASIC3.74□□□□□ -1.81
SHMT2P34897 KCTD10P1-201ENST00000434203 625 ntBASIC3.74□□□□□ -1.81
SHMT2P34897 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC3.74□□□□□ -1.81
SHMT2P34897 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SHMT2P34897 MED6P1-201ENST00000439659 713 ntBASIC3.74□□□□□ -1.81
SHMT2P34897 AC009263.1-201ENST00000441193 1239 ntBASIC3.74□□□□□ -1.81
SHMT2P34897 AL500522.2-201ENST00000448562 343 ntBASIC3.74□□□□□ -1.81
SHMT2P34897 RPS17P13-201ENST00000448974 407 ntBASIC3.74□□□□□ -1.81
SHMT2P34897 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC3.74□□□□□ -1.81
SHMT2P34897 AC108729.2-201ENST00000476543 840 ntBASIC3.74□□□□□ -1.81
SHMT2P34897 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC3.74□□□□□ -1.81
SHMT2P34897 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.74□□□□□ -1.81
SHMT2P34897 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.74□□□□□ -1.81
SHMT2P34897 AC093014.1-201ENST00000548926 724 ntBASIC3.74□□□□□ -1.81
SHMT2P34897 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC3.74□□□□□ -1.81
SHMT2P34897 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC3.74□□□□□ -1.81
SHMT2P34897 AL450270.1-201ENST00000606160 391 ntBASIC3.74□□□□□ -1.81
SHMT2P34897 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.74□□□□□ -1.81
SHMT2P34897 FP236240.3-201ENST00000623061 327 ntBASIC3.74□□□□□ -1.81
SHMT2P34897 AC015726.3-201ENST00000624501 418 ntBASIC3.74□□□□□ -1.81
SHMT2P34897 AC116563.2-201ENST00000624751 535 ntBASIC3.74□□□□□ -1.81
SHMT2P34897 AC009452.1-201ENST00000640823 606 ntBASIC3.74□□□□□ -1.81
SHMT2P34897 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.74□□□□□ -1.81
SHMT2P34897 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
SHMT2P34897 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SHMT2P34897 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.74□□□□□ -1.81
SHMT2P34897 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
SHMT2P34897 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.73□□□□□ -1.81
SHMT2P34897 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
SHMT2P34897 GTF2H2B-203ENST00000508065 1432 ntBASIC3.73□□□□□ -1.81
SHMT2P34897 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
SHMT2P34897 OR4A15-201ENST00000314706 1035 ntBASIC3.73□□□□□ -1.81
SHMT2P34897 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
SHMT2P34897 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
SHMT2P34897 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC3.73□□□□□ -1.81
SHMT2P34897 U1.1-201ENST00000384101 164 ntBASIC3.73□□□□□ -1.81
SHMT2P34897 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC3.73□□□□□ -1.81
SHMT2P34897 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.73□□□□□ -1.81
SHMT2P34897 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
SHMT2P34897 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC3.73□□□□□ -1.81
SHMT2P34897 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.73□□□□□ -1.81
SHMT2P34897 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
SHMT2P34897 CBX1P4-201ENST00000439415 457 ntBASIC3.73□□□□□ -1.81
SHMT2P34897 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC3.73□□□□□ -1.81
SHMT2P34897 RPL23AP23-201ENST00000452590 471 ntBASIC3.73□□□□□ -1.81
SHMT2P34897 SNRPGP5-201ENST00000456003 220 ntBASIC3.73□□□□□ -1.81
SHMT2P34897 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
SHMT2P34897 MTND6P6-201ENST00000478031 263 ntBASIC3.73□□□□□ -1.81
SHMT2P34897 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC3.73□□□□□ -1.81
SHMT2P34897 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.73□□□□□ -1.81
SHMT2P34897 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
SHMT2P34897 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
SHMT2P34897 SETP12-201ENST00000514068 805 ntBASIC3.73□□□□□ -1.81
SHMT2P34897 IGKV2D-23-201ENST00000518179 286 ntBASIC3.73□□□□□ -1.81
SHMT2P34897 AC008802.1-201ENST00000519121 791 ntBASIC3.73□□□□□ -1.81
SHMT2P34897 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.73□□□□□ -1.81
SHMT2P34897 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.73□□□□□ -1.81
SHMT2P34897 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC3.73□□□□□ -1.81
SHMT2P34897 LINC00557-201ENST00000563184 1279 ntBASIC3.73□□□□□ -1.81
SHMT2P34897 AC233266.2-201ENST00000567067 528 ntBASIC3.73□□□□□ -1.81
SHMT2P34897 AC107982.3-201ENST00000584957 985 ntBASIC3.73□□□□□ -1.81
SHMT2P34897 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC3.73□□□□□ -1.81
SHMT2P34897 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.73□□□□□ -1.81
SHMT2P34897 AL354760.1-201ENST00000608357 643 ntBASIC3.73□□□□□ -1.81
SHMT2P34897 AC000123.2-201ENST00000623124 461 ntBASIC3.73□□□□□ -1.81
SHMT2P34897 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.73□□□□□ -1.81
SHMT2P34897 AC006504.1-201ENST00000562493 3666 ntBASIC3.73□□□□□ -1.81
SHMT2P34897 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
SHMT2P34897 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
SHMT2P34897 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
SHMT2P34897 AL139811.1-201ENST00000424779 2299 ntBASIC3.73□□□□□ -1.81
SHMT2P34897 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SHMT2P34897 RPS4XP5-202ENST00000449995 1334 ntBASIC3.72□□□□□ -1.81
SHMT2P34897 MTCO1P14-201ENST00000441695 1559 ntBASIC3.72□□□□□ -1.81
SHMT2P34897 RNU6-252P-201ENST00000363232 107 ntBASIC3.72□□□□□ -1.81
SHMT2P34897 MIR30B-201ENST00000384850 88 ntBASIC3.72□□□□□ -1.81
SHMT2P34897 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
SHMT2P34897 RPL32P23-201ENST00000397237 405 ntBASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms