Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 HIGD1AP12-201ENST00000427832 281 ntBASIC3.26□□□□□ -1.89
HLA-DMAP28067 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC3.26□□□□□ -1.89
HLA-DMAP28067 RPL21P112-201ENST00000434403 463 ntBASIC3.26□□□□□ -1.89
HLA-DMAP28067 B3GNT2P1-201ENST00000434960 952 ntBASIC3.26□□□□□ -1.89
HLA-DMAP28067 TPTE2P1-204ENST00000435256 593 ntBASIC3.26□□□□□ -1.89
HLA-DMAP28067 HMGB1P12-201ENST00000438594 598 ntBASIC3.26□□□□□ -1.89
HLA-DMAP28067 SNORA71B-202ENST00000439232 272 ntBASIC3.26□□□□□ -1.89
HLA-DMAP28067 RPS11P1-201ENST00000451072 473 ntBASIC3.26□□□□□ -1.89
HLA-DMAP28067 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.26□□□□□ -1.89
HLA-DMAP28067 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC3.26□□□□□ -1.89
HLA-DMAP28067 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
HLA-DMAP28067 AK3P4-201ENST00000504283 583 ntBASIC3.26□□□□□ -1.89
HLA-DMAP28067 ATG10-AS1-201ENST00000504846 648 ntBASIC3.26□□□□□ -1.89
HLA-DMAP28067 TMEM248P1-201ENST00000510579 951 ntBASIC3.26□□□□□ -1.89
HLA-DMAP28067 RNU6-551P-201ENST00000516661 103 ntBASIC3.26□□□□□ -1.89
HLA-DMAP28067 AP002812.4-201ENST00000532139 286 ntBASIC3.26□□□□□ -1.89
HLA-DMAP28067 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.26□□□□□ -1.89
HLA-DMAP28067 AC074029.1-201ENST00000552531 1044 ntBASIC3.26□□□□□ -1.89
HLA-DMAP28067 TRAV37-201ENST00000553906 342 ntBASIC3.26□□□□□ -1.89
HLA-DMAP28067 AC068831.4-201ENST00000556118 109 ntBASIC3.26□□□□□ -1.89
HLA-DMAP28067 AC009268.1-201ENST00000561352 1203 ntBASIC3.26□□□□□ -1.89
HLA-DMAP28067 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.26□□□□□ -1.89
HLA-DMAP28067 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC3.26□□□□□ -1.89
HLA-DMAP28067 AC010735.1-201ENST00000567305 1026 ntBASIC3.26□□□□□ -1.89
HLA-DMAP28067 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
HLA-DMAP28067 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC3.26□□□□□ -1.89
HLA-DMAP28067 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.26□□□□□ -1.89
HLA-DMAP28067 OR7E18P-201ENST00000592589 702 ntBASIC3.26□□□□□ -1.89
HLA-DMAP28067 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
HLA-DMAP28067 AC012557.1-201ENST00000607115 611 ntBASIC3.26□□□□□ -1.89
HLA-DMAP28067 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC3.26□□□□□ -1.89
HLA-DMAP28067 MTND5P27-201ENST00000428871 1720 ntBASIC3.26□□□□□ -1.89
HLA-DMAP28067 AP002001.2-201ENST00000529025 1469 ntBASIC3.26□□□□□ -1.89
HLA-DMAP28067 AC073073.2-201ENST00000609827 2578 ntBASIC3.26□□□□□ -1.89
HLA-DMAP28067 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
HLA-DMAP28067 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
HLA-DMAP28067 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
HLA-DMAP28067 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
HLA-DMAP28067 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
HLA-DMAP28067 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
HLA-DMAP28067 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
HLA-DMAP28067 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC3.25□□□□□ -1.89
HLA-DMAP28067 RNU6-152P-201ENST00000384037 107 ntBASIC3.25□□□□□ -1.89
HLA-DMAP28067 RNU11-4P-201ENST00000391149 133 ntBASIC3.25□□□□□ -1.89
HLA-DMAP28067 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC3.25□□□□□ -1.89
HLA-DMAP28067 XKRYP4-201ENST00000414395 483 ntBASIC3.25□□□□□ -1.89
HLA-DMAP28067 AC234782.4-201ENST00000417646 1048 ntBASIC3.25□□□□□ -1.89
HLA-DMAP28067 AL691447.1-201ENST00000419456 387 ntBASIC3.25□□□□□ -1.89
HLA-DMAP28067 AL590762.4-201ENST00000425885 253 ntBASIC3.25□□□□□ -1.89
HLA-DMAP28067 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC3.25□□□□□ -1.89
HLA-DMAP28067 BTF3P10-201ENST00000433415 495 ntBASIC3.25□□□□□ -1.89
HLA-DMAP28067 UBE2V2P3-201ENST00000433562 437 ntBASIC3.25□□□□□ -1.89
HLA-DMAP28067 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC3.25□□□□□ -1.89
HLA-DMAP28067 XKRYP6-201ENST00000440468 1116 ntBASIC3.25□□□□□ -1.89
HLA-DMAP28067 XKRYP3-201ENST00000442113 1116 ntBASIC3.25□□□□□ -1.89
HLA-DMAP28067 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.25□□□□□ -1.89
HLA-DMAP28067 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC3.25□□□□□ -1.89
HLA-DMAP28067 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC3.25□□□□□ -1.89
HLA-DMAP28067 XKRYP5-201ENST00000449659 483 ntBASIC3.25□□□□□ -1.89
HLA-DMAP28067 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.25□□□□□ -1.89
HLA-DMAP28067 RPS4XP2-201ENST00000458402 793 ntBASIC3.25□□□□□ -1.89
HLA-DMAP28067 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
HLA-DMAP28067 RPS4XP13-201ENST00000483219 789 ntBASIC3.25□□□□□ -1.89
HLA-DMAP28067 RNA5SP380-201ENST00000517190 98 ntBASIC3.25□□□□□ -1.89
HLA-DMAP28067 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC3.25□□□□□ -1.89
HLA-DMAP28067 AC068657.1-201ENST00000520807 306 ntBASIC3.25□□□□□ -1.89
HLA-DMAP28067 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC3.25□□□□□ -1.89
HLA-DMAP28067 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.25□□□□□ -1.89
HLA-DMAP28067 CYCSP29-201ENST00000533731 318 ntBASIC3.25□□□□□ -1.89
HLA-DMAP28067 AC091516.1-201ENST00000549191 703 ntBASIC3.25□□□□□ -1.89
HLA-DMAP28067 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.25□□□□□ -1.89
HLA-DMAP28067 AC090616.5-202ENST00000582111 297 ntBASIC3.25□□□□□ -1.89
HLA-DMAP28067 MIR4480-201ENST00000582492 71 ntBASIC3.25□□□□□ -1.89
HLA-DMAP28067 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
HLA-DMAP28067 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC3.25□□□□□ -1.89
HLA-DMAP28067 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC3.25□□□□□ -1.89
HLA-DMAP28067 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
HLA-DMAP28067 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
HLA-DMAP28067 PLCE1P1-201ENST00000622094 305 ntBASIC3.25□□□□□ -1.89
HLA-DMAP28067 CDRT1-208ENST00000630868 794 ntBASIC3.25□□□□□ -1.89
HLA-DMAP28067 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
HLA-DMAP28067 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.25□□□□□ -1.89
HLA-DMAP28067 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
HLA-DMAP28067 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
HLA-DMAP28067 MFSD8-236ENST00000641509 4050 ntBASIC3.24□□□□□ -1.89
HLA-DMAP28067 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC3.24□□□□□ -1.89
HLA-DMAP28067 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
HLA-DMAP28067 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
HLA-DMAP28067 AC079741.1-201ENST00000321498 212 ntBASIC3.24□□□□□ -1.89
HLA-DMAP28067 SNORA51.2-201ENST00000364595 132 ntBASIC3.24□□□□□ -1.89
HLA-DMAP28067 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
HLA-DMAP28067 MIR323B-201ENST00000385269 82 ntBASIC3.24□□□□□ -1.89
HLA-DMAP28067 MIR591-201ENST00000385290 95 ntBASIC3.24□□□□□ -1.89
HLA-DMAP28067 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
HLA-DMAP28067 RPS3AP23-201ENST00000401762 784 ntBASIC3.24□□□□□ -1.89
HLA-DMAP28067 ZNF736P10Y-201ENST00000403990 1110 ntBASIC3.24□□□□□ -1.89
HLA-DMAP28067 RPS16P5-201ENST00000406501 404 ntBASIC3.24□□□□□ -1.89
HLA-DMAP28067 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC3.24□□□□□ -1.89
HLA-DMAP28067 AL160175.1-201ENST00000428124 247 ntBASIC3.24□□□□□ -1.89
HLA-DMAP28067 CKS1BP5-201ENST00000434172 273 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 288.9 ms