Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 AL034403.1-201ENST00000399414 885 ntBASIC3.06□□□□□ -1.92
COL8A2P25067 AL034374.1-201ENST00000406329 351 ntBASIC3.06□□□□□ -1.92
COL8A2P25067 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.06□□□□□ -1.92
COL8A2P25067 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.06□□□□□ -1.92
COL8A2P25067 BX842559.1-201ENST00000419615 532 ntBASIC3.06□□□□□ -1.92
COL8A2P25067 FTH1P6-201ENST00000430768 320 ntBASIC3.06□□□□□ -1.92
COL8A2P25067 RPS26P40-201ENST00000435209 294 ntBASIC3.06□□□□□ -1.92
COL8A2P25067 CACYBPP1-201ENST00000438592 684 ntBASIC3.06□□□□□ -1.92
COL8A2P25067 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC3.06□□□□□ -1.92
COL8A2P25067 RSL24D1P2-201ENST00000445584 366 ntBASIC3.06□□□□□ -1.92
COL8A2P25067 RPL21P23-201ENST00000446654 460 ntBASIC3.06□□□□□ -1.92
COL8A2P25067 PRDX3P3-201ENST00000447765 522 ntBASIC3.06□□□□□ -1.92
COL8A2P25067 AC010655.1-201ENST00000449336 292 ntBASIC3.06□□□□□ -1.92
COL8A2P25067 PRSS3P4-201ENST00000453323 162 ntBASIC3.06□□□□□ -1.92
COL8A2P25067 AL354710.1-201ENST00000453641 246 ntBASIC3.06□□□□□ -1.92
COL8A2P25067 RPL31P53-201ENST00000457065 348 ntBASIC3.06□□□□□ -1.92
COL8A2P25067 TMEM161BP1-201ENST00000457388 1457 ntBASIC3.06□□□□□ -1.92
COL8A2P25067 SNORD105B-201ENST00000458770 79 ntBASIC3.06□□□□□ -1.92
COL8A2P25067 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.06□□□□□ -1.92
COL8A2P25067 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.06□□□□□ -1.92
COL8A2P25067 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.06□□□□□ -1.92
COL8A2P25067 SNORA70.18-201ENST00000516696 98 ntBASIC3.06□□□□□ -1.92
COL8A2P25067 NPM1P35-201ENST00000533043 868 ntBASIC3.06□□□□□ -1.92
COL8A2P25067 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.06□□□□□ -1.92
COL8A2P25067 AC023161.2-201ENST00000551218 780 ntBASIC3.06□□□□□ -1.92
COL8A2P25067 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.06□□□□□ -1.92
COL8A2P25067 TRAV15-201ENST00000556680 249 ntBASIC3.06□□□□□ -1.92
COL8A2P25067 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.06□□□□□ -1.92
COL8A2P25067 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.06□□□□□ -1.92
COL8A2P25067 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC3.06□□□□□ -1.92
COL8A2P25067 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.06□□□□□ -1.92
COL8A2P25067 AC020914.6-201ENST00000594327 272 ntBASIC3.06□□□□□ -1.92
COL8A2P25067 AC110792.3-201ENST00000595906 1614 ntBASIC3.06□□□□□ -1.92
COL8A2P25067 AC092354.2-201ENST00000607786 514 ntBASIC3.06□□□□□ -1.92
COL8A2P25067 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC3.06□□□□□ -1.92
COL8A2P25067 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.06□□□□□ -1.92
COL8A2P25067 AC243312.2-201ENST00000623340 601 ntBASIC3.06□□□□□ -1.92
COL8A2P25067 AC009229.4-201ENST00000623854 1947 ntBASIC3.06□□□□□ -1.92
COL8A2P25067 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC3.06□□□□□ -1.92
COL8A2P25067 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC3.06□□□□□ -1.92
COL8A2P25067 AL392088.2-201ENST00000637607 285 ntBASIC3.06□□□□□ -1.92
COL8A2P25067 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
COL8A2P25067 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
COL8A2P25067 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
COL8A2P25067 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
COL8A2P25067 NCAPGP1-201ENST00000505112 1814 ntBASIC3.05□□□□□ -1.92
COL8A2P25067 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
COL8A2P25067 MTCO1P12-201ENST00000414273 1543 ntBASIC3.05□□□□□ -1.92
COL8A2P25067 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.05□□□□□ -1.92
COL8A2P25067 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
COL8A2P25067 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.05□□□□□ -1.92
COL8A2P25067 MTND4P10-201ENST00000446199 1363 ntBASIC3.05□□□□□ -1.92
COL8A2P25067 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC3.05□□□□□ -1.92
COL8A2P25067 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
COL8A2P25067 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.05□□□□□ -1.92
COL8A2P25067 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
COL8A2P25067 SNORD46.1-201ENST00000364139 104 ntBASIC3.05□□□□□ -1.92
COL8A2P25067 RNA5SP387-201ENST00000364226 106 ntBASIC3.05□□□□□ -1.92
COL8A2P25067 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.05□□□□□ -1.92
COL8A2P25067 HMGB3P20-201ENST00000417997 600 ntBASIC3.05□□□□□ -1.92
COL8A2P25067 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
COL8A2P25067 RPL7P53-201ENST00000421245 739 ntBASIC3.05□□□□□ -1.92
COL8A2P25067 AC099336.2-201ENST00000422457 254 ntBASIC3.05□□□□□ -1.92
COL8A2P25067 SEC63P1-201ENST00000425785 1258 ntBASIC3.05□□□□□ -1.92
COL8A2P25067 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.05□□□□□ -1.92
COL8A2P25067 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.05□□□□□ -1.92
COL8A2P25067 NDUFB1P1-201ENST00000435191 180 ntBASIC3.05□□□□□ -1.92
COL8A2P25067 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC3.05□□□□□ -1.92
COL8A2P25067 RPL12P46-201ENST00000436610 195 ntBASIC3.05□□□□□ -1.92
COL8A2P25067 CYCSP35-201ENST00000451978 304 ntBASIC3.05□□□□□ -1.92
COL8A2P25067 CLIC4P1-201ENST00000453177 535 ntBASIC3.05□□□□□ -1.92
COL8A2P25067 AC073387.1-201ENST00000453261 709 ntBASIC3.05□□□□□ -1.92
COL8A2P25067 C1DP3-201ENST00000455013 423 ntBASIC3.05□□□□□ -1.92
COL8A2P25067 AC099560.2-201ENST00000457554 255 ntBASIC3.05□□□□□ -1.92
COL8A2P25067 RN7SL93P-201ENST00000463035 293 ntBASIC3.05□□□□□ -1.92
COL8A2P25067 FTH1P24-201ENST00000503502 462 ntBASIC3.05□□□□□ -1.92
COL8A2P25067 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
COL8A2P25067 AC004069.2-201ENST00000505438 1114 ntBASIC3.05□□□□□ -1.92
COL8A2P25067 FTH1P9-201ENST00000513251 355 ntBASIC3.05□□□□□ -1.92
COL8A2P25067 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.05□□□□□ -1.92
COL8A2P25067 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.05□□□□□ -1.92
COL8A2P25067 AL109741.3-201ENST00000561748 592 ntBASIC3.05□□□□□ -1.92
COL8A2P25067 AGGF1P8-201ENST00000562979 1000 ntBASIC3.05□□□□□ -1.92
COL8A2P25067 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.05□□□□□ -1.92
COL8A2P25067 FAM60CP-201ENST00000591086 664 ntBASIC3.05□□□□□ -1.92
COL8A2P25067 AC006116.10-201ENST00000591836 581 ntBASIC3.05□□□□□ -1.92
COL8A2P25067 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
COL8A2P25067 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
COL8A2P25067 AC100814.1-201ENST00000606963 623 ntBASIC3.05□□□□□ -1.92
COL8A2P25067 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.05□□□□□ -1.92
COL8A2P25067 AC117490.2-201ENST00000610042 594 ntBASIC3.05□□□□□ -1.92
COL8A2P25067 AC107308.1-201ENST00000615897 301 ntBASIC3.05□□□□□ -1.92
COL8A2P25067 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
COL8A2P25067 AC015967.1-201ENST00000619893 476 ntBASIC3.05□□□□□ -1.92
COL8A2P25067 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.05□□□□□ -1.92
COL8A2P25067 AL451142.2-201ENST00000429076 2090 ntBASIC3.05□□□□□ -1.92
COL8A2P25067 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
COL8A2P25067 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.04□□□□□ -1.92
COL8A2P25067 AL365440.1-201ENST00000436135 2167 ntBASIC3.04□□□□□ -1.92
COL8A2P25067 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms