Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
NFKB1P19838 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
NFKB1P19838 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
NFKB1P19838 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC6.15□□□□□ -1.42
NFKB1P19838 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC6.15□□□□□ -1.42
NFKB1P19838 ATP5A1P4-201ENST00000556888 1605 ntBASIC6.15□□□□□ -1.42
NFKB1P19838 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC6.15□□□□□ -1.42
NFKB1P19838 Y_RNA.31-201ENST00000362574 102 ntBASIC6.15□□□□□ -1.42
NFKB1P19838 RNU1-134P-201ENST00000362935 165 ntBASIC6.15□□□□□ -1.42
NFKB1P19838 Y_RNA.197-201ENST00000364004 102 ntBASIC6.15□□□□□ -1.42
NFKB1P19838 RN7SKP171-201ENST00000364417 303 ntBASIC6.15□□□□□ -1.42
NFKB1P19838 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
NFKB1P19838 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
NFKB1P19838 AC087752.1-201ENST00000391360 558 ntBASIC6.15□□□□□ -1.42
NFKB1P19838 AL583835.1-201ENST00000399570 407 ntBASIC6.15□□□□□ -1.42
NFKB1P19838 AL096800.1-201ENST00000405326 893 ntBASIC6.15□□□□□ -1.42
NFKB1P19838 RPL34P3-201ENST00000421454 338 ntBASIC6.15□□□□□ -1.42
NFKB1P19838 PMCHL1-202ENST00000423102 261 ntBASIC6.15□□□□□ -1.42
NFKB1P19838 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
NFKB1P19838 AC130360.1-201ENST00000425489 1117 ntBASIC6.15□□□□□ -1.42
NFKB1P19838 AC245884.2-201ENST00000426257 404 ntBASIC6.15□□□□□ -1.42
NFKB1P19838 RPSAP65-201ENST00000429660 595 ntBASIC6.15□□□□□ -1.42
NFKB1P19838 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC6.15□□□□□ -1.42
NFKB1P19838 RPS26P40-201ENST00000435209 294 ntBASIC6.15□□□□□ -1.42
NFKB1P19838 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC6.15□□□□□ -1.42
NFKB1P19838 AC023141.3-201ENST00000436698 278 ntBASIC6.15□□□□□ -1.42
NFKB1P19838 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC6.15□□□□□ -1.42
NFKB1P19838 H3F3BP1-201ENST00000440551 403 ntBASIC6.15□□□□□ -1.42
NFKB1P19838 AL049734.2-201ENST00000441066 616 ntBASIC6.15□□□□□ -1.42
NFKB1P19838 TCEA1P1-201ENST00000449716 880 ntBASIC6.15□□□□□ -1.42
NFKB1P19838 PPIAP7-201ENST00000454070 489 ntBASIC6.15□□□□□ -1.42
NFKB1P19838 DHFRP3-201ENST00000455595 559 ntBASIC6.15□□□□□ -1.42
NFKB1P19838 RPL23AP40-201ENST00000487630 390 ntBASIC6.15□□□□□ -1.42
NFKB1P19838 SUMO2P4-201ENST00000504193 276 ntBASIC6.15□□□□□ -1.42
NFKB1P19838 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
NFKB1P19838 AC114797.1-201ENST00000514003 728 ntBASIC6.15□□□□□ -1.42
NFKB1P19838 RNU6-264P-201ENST00000517134 104 ntBASIC6.15□□□□□ -1.42
NFKB1P19838 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC6.15□□□□□ -1.42
NFKB1P19838 AC130365.2-201ENST00000525882 1201 ntBASIC6.15□□□□□ -1.42
NFKB1P19838 AP000620.1-201ENST00000527147 504 ntBASIC6.15□□□□□ -1.42
NFKB1P19838 LDHC-205ENST00000537486 583 ntTSL 5 BASIC6.15□□□□□ -1.42
NFKB1P19838 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC6.15□□□□□ -1.42
NFKB1P19838 OLR1-210ENST00000544577 924 ntTSL 5 BASIC6.15□□□□□ -1.42
NFKB1P19838 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC6.15□□□□□ -1.42
NFKB1P19838 AL356432.3-201ENST00000568952 465 ntBASIC6.15□□□□□ -1.42
NFKB1P19838 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
NFKB1P19838 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.15□□□□□ -1.42
NFKB1P19838 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6.15□□□□□ -1.42
NFKB1P19838 AC096861.1-201ENST00000616652 240 ntBASIC6.15□□□□□ -1.42
NFKB1P19838 uc_338.9-201ENST00000617424 182 ntBASIC6.15□□□□□ -1.42
NFKB1P19838 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
NFKB1P19838 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC6.15□□□□□ -1.43
NFKB1P19838 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
NFKB1P19838 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC6.15□□□□□ -1.43
NFKB1P19838 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC6.15□□□□□ -1.43
NFKB1P19838 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
NFKB1P19838 TTC41P-205ENST00000551270 3963 ntBASIC6.15□□□□□ -1.43
NFKB1P19838 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
NFKB1P19838 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC6.14□□□□□ -1.43
NFKB1P19838 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC6.14□□□□□ -1.43
NFKB1P19838 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
NFKB1P19838 NLN-202ENST00000502464 8354 ntTSL 5 BASIC6.14□□□□□ -1.43
NFKB1P19838 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
NFKB1P19838 CD36-221ENST00000534394 1741 ntTSL 2 BASIC6.14□□□□□ -1.43
NFKB1P19838 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
NFKB1P19838 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC6.14□□□□□ -1.43
NFKB1P19838 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
NFKB1P19838 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.14□□□□□ -1.43
NFKB1P19838 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
NFKB1P19838 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
NFKB1P19838 MIR568-201ENST00000385036 95 ntBASIC6.14□□□□□ -1.43
NFKB1P19838 AL031679.1-201ENST00000400616 525 ntBASIC6.14□□□□□ -1.43
NFKB1P19838 AL359634.1-202ENST00000404721 284 ntBASIC6.14□□□□□ -1.43
NFKB1P19838 RN7SKP86-201ENST00000410454 332 ntBASIC6.14□□□□□ -1.43
NFKB1P19838 RNU6-193P-201ENST00000410977 107 ntBASIC6.14□□□□□ -1.43
NFKB1P19838 AC017078.1-201ENST00000416146 368 ntBASIC6.14□□□□□ -1.43
NFKB1P19838 AC008280.1-201ENST00000418851 412 ntBASIC6.14□□□□□ -1.43
NFKB1P19838 RPL12P12-201ENST00000424633 501 ntBASIC6.14□□□□□ -1.43
NFKB1P19838 AKR1B10P1-201ENST00000425765 942 ntBASIC6.14□□□□□ -1.43
NFKB1P19838 AC006548.1-201ENST00000427470 102 ntBASIC6.14□□□□□ -1.43
NFKB1P19838 USP24P1-201ENST00000433802 779 ntBASIC6.14□□□□□ -1.43
NFKB1P19838 RPS3AP52-201ENST00000435639 297 ntBASIC6.14□□□□□ -1.43
NFKB1P19838 AL031663.1-201ENST00000437445 219 ntBASIC6.14□□□□□ -1.43
NFKB1P19838 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC6.14□□□□□ -1.43
NFKB1P19838 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC6.14□□□□□ -1.43
NFKB1P19838 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC6.14□□□□□ -1.43
NFKB1P19838 FTLP8-201ENST00000446770 267 ntBASIC6.14□□□□□ -1.43
NFKB1P19838 AC016027.4-201ENST00000450866 277 ntBASIC6.14□□□□□ -1.43
NFKB1P19838 RN7SL254P-201ENST00000460609 284 ntBASIC6.14□□□□□ -1.43
NFKB1P19838 GMFBP1-201ENST00000467831 427 ntBASIC6.14□□□□□ -1.43
NFKB1P19838 AC090453.1-201ENST00000495560 436 ntBASIC6.14□□□□□ -1.43
NFKB1P19838 RNU4-29P-201ENST00000515943 174 ntBASIC6.14□□□□□ -1.43
NFKB1P19838 SCARNA24.1-201ENST00000516465 137 ntBASIC6.14□□□□□ -1.43
NFKB1P19838 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC6.14□□□□□ -1.43
NFKB1P19838 AC125612.1-201ENST00000547580 377 ntBASIC6.14□□□□□ -1.43
NFKB1P19838 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC6.14□□□□□ -1.43
NFKB1P19838 AC063950.1-201ENST00000552036 308 ntBASIC6.14□□□□□ -1.43
NFKB1P19838 SNRPGP18-201ENST00000553000 214 ntBASIC6.14□□□□□ -1.43
NFKB1P19838 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC6.14□□□□□ -1.43
NFKB1P19838 AL117187.1-201ENST00000555482 181 ntBASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms