Protein–RNA interactions for Protein: P09016

HOXD4, Homeobox protein Hox-D4, humanhuman

Predicted RBP Predictions only

Length 255 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD4P09016 AL139095.3-201ENST00000419672 1203 ntBASIC3.87□□□□□ -1.79
HOXD4P09016 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC3.87□□□□□ -1.79
HOXD4P09016 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC3.87□□□□□ -1.79
HOXD4P09016 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.87□□□□□ -1.79
HOXD4P09016 CEACAMP1-201ENST00000434624 1035 ntBASIC3.87□□□□□ -1.79
HOXD4P09016 FABP3P2-201ENST00000453169 399 ntBASIC3.87□□□□□ -1.79
HOXD4P09016 RPL7P48-201ENST00000461513 746 ntBASIC3.87□□□□□ -1.79
HOXD4P09016 AC022034.3-201ENST00000471393 478 ntBASIC3.87□□□□□ -1.79
HOXD4P09016 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC3.87□□□□□ -1.79
HOXD4P09016 AC090013.1-201ENST00000485147 480 ntBASIC3.87□□□□□ -1.79
HOXD4P09016 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC3.87□□□□□ -1.79
HOXD4P09016 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
HOXD4P09016 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.87□□□□□ -1.79
HOXD4P09016 IGKV2D-23-201ENST00000518179 286 ntBASIC3.87□□□□□ -1.79
HOXD4P09016 SMARCE1P4-201ENST00000523647 241 ntBASIC3.87□□□□□ -1.79
HOXD4P09016 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.87□□□□□ -1.79
HOXD4P09016 OR5BC1P-201ENST00000529327 739 ntBASIC3.87□□□□□ -1.79
HOXD4P09016 TRAV8-5-201ENST00000537369 341 ntBASIC3.87□□□□□ -1.79
HOXD4P09016 AC007424.1-203ENST00000554613 687 ntBASIC3.87□□□□□ -1.79
HOXD4P09016 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC3.87□□□□□ -1.79
HOXD4P09016 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC3.87□□□□□ -1.79
HOXD4P09016 MIR4429-201ENST00000580105 73 ntBASIC3.87□□□□□ -1.79
HOXD4P09016 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC3.87□□□□□ -1.79
HOXD4P09016 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.87□□□□□ -1.79
HOXD4P09016 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.87□□□□□ -1.79
HOXD4P09016 MIR7973-1-201ENST00000614683 76 ntBASIC3.87□□□□□ -1.79
HOXD4P09016 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
HOXD4P09016 AC109809.1-201ENST00000619665 545 ntBASIC3.87□□□□□ -1.79
HOXD4P09016 AC097520.1-201ENST00000624435 385 ntBASIC3.87□□□□□ -1.79
HOXD4P09016 LGI1-209ENST00000627699 664 ntTSL 3 BASIC3.87□□□□□ -1.79
HOXD4P09016 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.87□□□□□ -1.79
HOXD4P09016 AL590396.4-201ENST00000636779 956 ntBASIC3.87□□□□□ -1.79
HOXD4P09016 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.87□□□□□ -1.79
HOXD4P09016 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
HOXD4P09016 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
HOXD4P09016 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
HOXD4P09016 LARP1BP1-201ENST00000506036 1359 ntBASIC3.87□□□□□ -1.79
HOXD4P09016 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
HOXD4P09016 AC114546.3-201ENST00000623582 1734 ntBASIC3.87□□□□□ -1.79
HOXD4P09016 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
HOXD4P09016 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
HOXD4P09016 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC3.86□□□□□ -1.79
HOXD4P09016 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
HOXD4P09016 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
HOXD4P09016 ARHGAP42P1-201ENST00000507474 1976 ntBASIC3.86□□□□□ -1.79
HOXD4P09016 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC3.86□□□□□ -1.79
HOXD4P09016 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.86□□□□□ -1.79
HOXD4P09016 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
HOXD4P09016 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
HOXD4P09016 RNU1-14P-201ENST00000362759 152 ntBASIC3.86□□□□□ -1.79
HOXD4P09016 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
HOXD4P09016 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC3.86□□□□□ -1.79
HOXD4P09016 RNU1-89P-201ENST00000384592 164 ntBASIC3.86□□□□□ -1.79
HOXD4P09016 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC3.86□□□□□ -1.79
HOXD4P09016 Z98941.1-201ENST00000407764 100 ntBASIC3.86□□□□□ -1.79
HOXD4P09016 RN7SKP202-201ENST00000410439 330 ntBASIC3.86□□□□□ -1.79
HOXD4P09016 RPS20P14-201ENST00000412545 360 ntBASIC3.86□□□□□ -1.79
HOXD4P09016 UBE2V1P9-201ENST00000414760 368 ntBASIC3.86□□□□□ -1.79
HOXD4P09016 AC115285.1-201ENST00000424879 736 ntBASIC3.86□□□□□ -1.79
HOXD4P09016 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC3.86□□□□□ -1.79
HOXD4P09016 AL157831.1-201ENST00000426134 473 ntBASIC3.86□□□□□ -1.79
HOXD4P09016 RPS24P8-201ENST00000431490 402 ntBASIC3.86□□□□□ -1.79
HOXD4P09016 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC3.86□□□□□ -1.79
HOXD4P09016 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC3.86□□□□□ -1.79
HOXD4P09016 TRAPPC13P1-201ENST00000435991 1062 ntBASIC3.86□□□□□ -1.79
HOXD4P09016 RPL23AP52-201ENST00000439311 478 ntBASIC3.86□□□□□ -1.79
HOXD4P09016 ARF4P4-201ENST00000439608 520 ntBASIC3.86□□□□□ -1.79
HOXD4P09016 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC3.86□□□□□ -1.79
HOXD4P09016 RPL34P26-201ENST00000445636 354 ntBASIC3.86□□□□□ -1.79
HOXD4P09016 AL009048.1-201ENST00000450437 298 ntBASIC3.86□□□□□ -1.79
HOXD4P09016 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.86□□□□□ -1.79
HOXD4P09016 AL132838.2-201ENST00000492041 314 ntBASIC3.86□□□□□ -1.79
HOXD4P09016 RN7SL691P-201ENST00000494487 301 ntBASIC3.86□□□□□ -1.79
HOXD4P09016 RPS27AP13-201ENST00000498403 237 ntBASIC3.86□□□□□ -1.79
HOXD4P09016 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
HOXD4P09016 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC3.86□□□□□ -1.79
HOXD4P09016 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC3.86□□□□□ -1.79
HOXD4P09016 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.86□□□□□ -1.79
HOXD4P09016 AC099522.1-202ENST00000514718 367 ntBASIC3.86□□□□□ -1.79
HOXD4P09016 RNA5SP446-201ENST00000515955 82 ntBASIC3.86□□□□□ -1.79
HOXD4P09016 SNORA19.3-201ENST00000516165 130 ntBASIC3.86□□□□□ -1.79
HOXD4P09016 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC3.86□□□□□ -1.79
HOXD4P09016 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.86□□□□□ -1.79
HOXD4P09016 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC3.86□□□□□ -1.79
HOXD4P09016 AC010735.1-201ENST00000567305 1026 ntBASIC3.86□□□□□ -1.79
HOXD4P09016 AC009101.1-201ENST00000568135 242 ntBASIC3.86□□□□□ -1.79
HOXD4P09016 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC3.86□□□□□ -1.79
HOXD4P09016 RN7SL622P-201ENST00000585292 275 ntBASIC3.86□□□□□ -1.79
HOXD4P09016 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC3.86□□□□□ -1.79
HOXD4P09016 AL022067.1-201ENST00000602426 454 ntBASIC3.86□□□□□ -1.79
HOXD4P09016 AC013244.3-201ENST00000605614 388 ntBASIC3.86□□□□□ -1.79
HOXD4P09016 AP002802.2-201ENST00000605877 235 ntBASIC3.86□□□□□ -1.79
HOXD4P09016 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC3.86□□□□□ -1.79
HOXD4P09016 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC3.86□□□□□ -1.79
HOXD4P09016 OR6R2P-201ENST00000609216 300 ntBASIC3.86□□□□□ -1.79
HOXD4P09016 uc_338.32-201ENST00000615087 172 ntBASIC3.86□□□□□ -1.79
HOXD4P09016 CYCSP41-201ENST00000616920 296 ntBASIC3.86□□□□□ -1.79
HOXD4P09016 AP004607.9-201ENST00000618202 316 ntBASIC3.86□□□□□ -1.79
HOXD4P09016 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC3.86□□□□□ -1.79
HOXD4P09016 AL078595.3-201ENST00000623815 1166 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms