Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.28□□□□□ -1.72
VTNP04004 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC4.28□□□□□ -1.72
VTNP04004 AL590609.2-201ENST00000421430 368 ntBASIC4.28□□□□□ -1.72
VTNP04004 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC4.28□□□□□ -1.72
VTNP04004 RPS26P47-201ENST00000427219 348 ntBASIC4.28□□□□□ -1.72
VTNP04004 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC4.28□□□□□ -1.72
VTNP04004 MTCO1P54-201ENST00000430139 712 ntBASIC4.28□□□□□ -1.72
VTNP04004 TRBV26OR9-2-201ENST00000432077 293 ntBASIC4.28□□□□□ -1.72
VTNP04004 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.28□□□□□ -1.72
VTNP04004 AC092013.1-201ENST00000438795 332 ntBASIC4.28□□□□□ -1.72
VTNP04004 VN1R25P-201ENST00000443385 738 ntBASIC4.28□□□□□ -1.72
VTNP04004 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
VTNP04004 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC4.28□□□□□ -1.72
VTNP04004 AC097499.1-201ENST00000444277 208 ntBASIC4.28□□□□□ -1.72
VTNP04004 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.28□□□□□ -1.72
VTNP04004 AC104306.1-201ENST00000449702 371 ntBASIC4.28□□□□□ -1.72
VTNP04004 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.28□□□□□ -1.72
VTNP04004 VN1R40P-201ENST00000455196 941 ntBASIC4.28□□□□□ -1.72
VTNP04004 AC104982.1-201ENST00000478775 574 ntBASIC4.28□□□□□ -1.72
VTNP04004 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC4.28□□□□□ -1.72
VTNP04004 PRELID3BP6-201ENST00000503839 571 ntBASIC4.28□□□□□ -1.72
VTNP04004 NAT2-202ENST00000520116 716 ntTSL 3 BASIC4.28□□□□□ -1.72
VTNP04004 AC022695.1-201ENST00000522089 237 ntBASIC4.28□□□□□ -1.72
VTNP04004 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.28□□□□□ -1.72
VTNP04004 AL109741.3-201ENST00000561748 592 ntBASIC4.28□□□□□ -1.72
VTNP04004 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC4.28□□□□□ -1.72
VTNP04004 MTND6P33-201ENST00000571794 183 ntBASIC4.28□□□□□ -1.72
VTNP04004 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.28□□□□□ -1.72
VTNP04004 AC124283.4-201ENST00000581815 456 ntBASIC4.28□□□□□ -1.72
VTNP04004 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.28□□□□□ -1.72
VTNP04004 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.28□□□□□ -1.72
VTNP04004 AC096947.1-201ENST00000603233 470 ntBASIC4.28□□□□□ -1.72
VTNP04004 PSMA6P4-201ENST00000603247 718 ntBASIC4.28□□□□□ -1.72
VTNP04004 AC010200.2-201ENST00000605098 235 ntBASIC4.28□□□□□ -1.72
VTNP04004 AC090525.3-201ENST00000605601 189 ntBASIC4.28□□□□□ -1.72
VTNP04004 AC017076.1-201ENST00000607613 578 ntBASIC4.28□□□□□ -1.72
VTNP04004 RNU6-1192P-201ENST00000612197 107 ntBASIC4.28□□□□□ -1.72
VTNP04004 AC116447.1-201ENST00000613153 453 ntBASIC4.28□□□□□ -1.72
VTNP04004 AC005344.1-201ENST00000613391 459 ntBASIC4.28□□□□□ -1.72
VTNP04004 RNU6-489P-201ENST00000618289 107 ntBASIC4.28□□□□□ -1.72
VTNP04004 AC007275.1-201ENST00000621243 671 ntBASIC4.28□□□□□ -1.72
VTNP04004 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
VTNP04004 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC4.28□□□□□ -1.72
VTNP04004 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
VTNP04004 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
VTNP04004 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
VTNP04004 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.28□□□□□ -1.72
VTNP04004 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
VTNP04004 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.28□□□□□ -1.72
VTNP04004 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.28□□□□□ -1.72
VTNP04004 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.28□□□□□ -1.72
VTNP04004 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
VTNP04004 NEAT1-202ENST00000501122 22743 ntBASIC4.27□□□□□ -1.73
VTNP04004 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC4.27□□□□□ -1.73
VTNP04004 ZNF285B-201ENST00000561698 1767 ntBASIC4.27□□□□□ -1.73
VTNP04004 PHKBP1-201ENST00000450951 1951 ntBASIC4.27□□□□□ -1.73
VTNP04004 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
VTNP04004 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
VTNP04004 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
VTNP04004 SNORD56.4-201ENST00000363883 71 ntBASIC4.27□□□□□ -1.73
VTNP04004 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC4.27□□□□□ -1.73
VTNP04004 RNU6-468P-201ENST00000384003 109 ntBASIC4.27□□□□□ -1.73
VTNP04004 RNU6-1257P-201ENST00000384625 110 ntBASIC4.27□□□□□ -1.73
VTNP04004 MTATP6P31-201ENST00000406985 692 ntBASIC4.27□□□□□ -1.73
VTNP04004 AL139247.1-201ENST00000422768 325 ntBASIC4.27□□□□□ -1.73
VTNP04004 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
VTNP04004 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.27□□□□□ -1.73
VTNP04004 NPM1P34-201ENST00000428821 893 ntBASIC4.27□□□□□ -1.73
VTNP04004 RPL37P1-201ENST00000432310 284 ntBASIC4.27□□□□□ -1.73
VTNP04004 FABP5P3-201ENST00000437960 408 ntBASIC4.27□□□□□ -1.73
VTNP04004 HMGB1P37-201ENST00000439613 609 ntBASIC4.27□□□□□ -1.73
VTNP04004 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.27□□□□□ -1.73
VTNP04004 AL358232.1-201ENST00000448030 501 ntBASIC4.27□□□□□ -1.73
VTNP04004 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.27□□□□□ -1.73
VTNP04004 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC4.27□□□□□ -1.73
VTNP04004 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC4.27□□□□□ -1.73
VTNP04004 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4.27□□□□□ -1.73
VTNP04004 AC007991.1-201ENST00000522680 631 ntBASIC4.27□□□□□ -1.73
VTNP04004 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
VTNP04004 OR4A12P-201ENST00000530847 918 ntBASIC4.27□□□□□ -1.73
VTNP04004 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC4.27□□□□□ -1.73
VTNP04004 AP003717.3-201ENST00000544832 1180 ntBASIC4.27□□□□□ -1.73
VTNP04004 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.27□□□□□ -1.73
VTNP04004 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC4.27□□□□□ -1.73
VTNP04004 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC4.27□□□□□ -1.73
VTNP04004 MIR548Y-201ENST00000582739 110 ntBASIC4.27□□□□□ -1.73
VTNP04004 AC245884.10-201ENST00000597355 337 ntBASIC4.27□□□□□ -1.73
VTNP04004 AC027449.1-201ENST00000608890 407 ntBASIC4.27□□□□□ -1.73
VTNP04004 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.27□□□□□ -1.73
VTNP04004 AL591424.2-201ENST00000617023 128 ntBASIC4.27□□□□□ -1.73
VTNP04004 AC093875.1-201ENST00000623688 504 ntBASIC4.27□□□□□ -1.73
VTNP04004 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
VTNP04004 AP003485.1-201ENST00000625093 753 ntBASIC4.27□□□□□ -1.73
VTNP04004 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
VTNP04004 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC4.27□□□□□ -1.73
VTNP04004 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
VTNP04004 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
VTNP04004 AC009229.4-201ENST00000623854 1947 ntBASIC4.27□□□□□ -1.73
VTNP04004 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
VTNP04004 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms