Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC4.33□□□□□ -1.72
LDLRP01130 AC010285.3-201ENST00000511668 676 ntBASIC4.33□□□□□ -1.72
LDLRP01130 AC015795.1-201ENST00000513669 327 ntBASIC4.33□□□□□ -1.72
LDLRP01130 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC4.33□□□□□ -1.72
LDLRP01130 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.33□□□□□ -1.72
LDLRP01130 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC4.33□□□□□ -1.72
LDLRP01130 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.33□□□□□ -1.72
LDLRP01130 AC124293.1-201ENST00000530034 493 ntBASIC4.33□□□□□ -1.72
LDLRP01130 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
LDLRP01130 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC4.33□□□□□ -1.72
LDLRP01130 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC4.33□□□□□ -1.72
LDLRP01130 AC106785.1-201ENST00000565935 262 ntBASIC4.33□□□□□ -1.72
LDLRP01130 RN7SL802P-201ENST00000577858 299 ntBASIC4.33□□□□□ -1.72
LDLRP01130 MIR5699-201ENST00000578903 90 ntBASIC4.33□□□□□ -1.72
LDLRP01130 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.33□□□□□ -1.72
LDLRP01130 AC012557.2-201ENST00000605919 418 ntBASIC4.33□□□□□ -1.72
LDLRP01130 AC024060.1-201ENST00000607052 494 ntBASIC4.33□□□□□ -1.72
LDLRP01130 AC243654.2-201ENST00000612843 443 ntBASIC4.33□□□□□ -1.72
LDLRP01130 AL138721.1-201ENST00000616756 179 ntBASIC4.33□□□□□ -1.72
LDLRP01130 AL035461.2-201ENST00000619201 524 ntBASIC4.33□□□□□ -1.72
LDLRP01130 AC123767.1-202ENST00000620407 817 ntBASIC4.33□□□□□ -1.72
LDLRP01130 AC067852.7-201ENST00000623270 535 ntBASIC4.33□□□□□ -1.72
LDLRP01130 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.33□□□□□ -1.72
LDLRP01130 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.33□□□□□ -1.72
LDLRP01130 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
LDLRP01130 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
LDLRP01130 OR56B2P-202ENST00000641377 2453 ntBASIC4.33□□□□□ -1.72
LDLRP01130 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
LDLRP01130 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
LDLRP01130 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
LDLRP01130 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.33□□□□□ -1.72
LDLRP01130 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
LDLRP01130 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.32□□□□□ -1.72
LDLRP01130 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.32□□□□□ -1.72
LDLRP01130 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.32□□□□□ -1.72
LDLRP01130 MTCO1P6-201ENST00000481192 1384 ntBASIC4.32□□□□□ -1.72
LDLRP01130 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
LDLRP01130 AL122126.1-201ENST00000546905 1318 ntBASIC4.32□□□□□ -1.72
LDLRP01130 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
LDLRP01130 RNU6-549P-201ENST00000384433 107 ntBASIC4.32□□□□□ -1.72
LDLRP01130 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC4.32□□□□□ -1.72
LDLRP01130 RNU6-77P-201ENST00000410554 91 ntBASIC4.32□□□□□ -1.72
LDLRP01130 AL591848.1-201ENST00000413092 322 ntBASIC4.32□□□□□ -1.72
LDLRP01130 RPS7P9-201ENST00000414704 586 ntBASIC4.32□□□□□ -1.72
LDLRP01130 AC234782.4-201ENST00000417646 1048 ntBASIC4.32□□□□□ -1.72
LDLRP01130 UBTFL3-201ENST00000418934 1024 ntBASIC4.32□□□□□ -1.72
LDLRP01130 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC4.32□□□□□ -1.72
LDLRP01130 AL645608.4-201ENST00000423619 154 ntBASIC4.32□□□□□ -1.72
LDLRP01130 AL138785.1-201ENST00000425821 331 ntBASIC4.32□□□□□ -1.72
LDLRP01130 AC073335.1-201ENST00000427776 363 ntBASIC4.32□□□□□ -1.72
LDLRP01130 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC4.32□□□□□ -1.72
LDLRP01130 AC092809.1-201ENST00000441469 474 ntBASIC4.32□□□□□ -1.72
LDLRP01130 ANKRD30BP3-201ENST00000444850 1070 ntBASIC4.32□□□□□ -1.72
LDLRP01130 AC092155.2-201ENST00000454675 477 ntBASIC4.32□□□□□ -1.72
LDLRP01130 UBTFL6-201ENST00000477929 1024 ntBASIC4.32□□□□□ -1.72
LDLRP01130 RPL21P131-201ENST00000497298 483 ntBASIC4.32□□□□□ -1.72
LDLRP01130 AC006499.6-201ENST00000511169 607 ntBASIC4.32□□□□□ -1.72
LDLRP01130 MTCO1P35-201ENST00000515270 228 ntBASIC4.32□□□□□ -1.72
LDLRP01130 RNU1-6P-201ENST00000516290 144 ntBASIC4.32□□□□□ -1.72
LDLRP01130 RN7SKP283-201ENST00000517197 270 ntBASIC4.32□□□□□ -1.72
LDLRP01130 MTCO1P47-201ENST00000523889 1271 ntBASIC4.32□□□□□ -1.72
LDLRP01130 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC4.32□□□□□ -1.72
LDLRP01130 DEFB109D-201ENST00000529497 240 ntBASIC4.32□□□□□ -1.72
LDLRP01130 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.32□□□□□ -1.72
LDLRP01130 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC4.32□□□□□ -1.72
LDLRP01130 AC068831.4-201ENST00000556118 109 ntBASIC4.32□□□□□ -1.72
LDLRP01130 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
LDLRP01130 MIR4716-201ENST00000579628 84 ntBASIC4.32□□□□□ -1.72
LDLRP01130 AC008088.1-201ENST00000580993 280 ntBASIC4.32□□□□□ -1.72
LDLRP01130 VN1R84P-201ENST00000593697 235 ntBASIC4.32□□□□□ -1.72
LDLRP01130 AC091057.2-201ENST00000602594 792 ntBASIC4.32□□□□□ -1.72
LDLRP01130 AL450336.1-201ENST00000605180 586 ntBASIC4.32□□□□□ -1.72
LDLRP01130 AL583856.2-201ENST00000606298 543 ntBASIC4.32□□□□□ -1.72
LDLRP01130 AC007497.1-201ENST00000610421 561 ntBASIC4.32□□□□□ -1.72
LDLRP01130 FAM27B-201ENST00000610601 213 ntBASIC4.32□□□□□ -1.72
LDLRP01130 AC034229.5-201ENST00000624258 185 ntBASIC4.32□□□□□ -1.72
LDLRP01130 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.32□□□□□ -1.72
LDLRP01130 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.32□□□□□ -1.72
LDLRP01130 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
LDLRP01130 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
LDLRP01130 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
LDLRP01130 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
LDLRP01130 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
LDLRP01130 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
LDLRP01130 AL513185.3-201ENST00000433335 1300 ntBASIC4.31□□□□□ -1.72
LDLRP01130 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
LDLRP01130 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
LDLRP01130 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC4.31□□□□□ -1.72
LDLRP01130 RNU6-1279P-201ENST00000383917 103 ntBASIC4.31□□□□□ -1.72
LDLRP01130 RNU1-82P-201ENST00000390851 165 ntBASIC4.31□□□□□ -1.72
LDLRP01130 OR6C69P-201ENST00000394268 893 ntBASIC4.31□□□□□ -1.72
LDLRP01130 FCF1P5-201ENST00000406490 482 ntBASIC4.31□□□□□ -1.72
LDLRP01130 RNA5SP104-201ENST00000410989 118 ntBASIC4.31□□□□□ -1.72
LDLRP01130 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC4.31□□□□□ -1.72
LDLRP01130 AL592310.1-201ENST00000414330 671 ntBASIC4.31□□□□□ -1.72
LDLRP01130 AC107081.1-201ENST00000414975 361 ntBASIC4.31□□□□□ -1.72
LDLRP01130 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.31□□□□□ -1.72
LDLRP01130 NPM1P24-201ENST00000428039 894 ntBASIC4.31□□□□□ -1.72
LDLRP01130 TXNL1P1-201ENST00000429528 554 ntBASIC4.31□□□□□ -1.72
LDLRP01130 MTND2P5-201ENST00000432656 1006 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 147 ms