Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 AC113194.1-201ENST00000606037 500 ntBASIC3.74□□□□□ -1.81
CLDN9O95484 AL450270.1-201ENST00000606160 391 ntBASIC3.74□□□□□ -1.81
CLDN9O95484 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC3.74□□□□□ -1.81
CLDN9O95484 AC003001.2-201ENST00000616294 831 ntBASIC3.74□□□□□ -1.81
CLDN9O95484 MIR1264-201ENST00000616374 69 ntBASIC3.74□□□□□ -1.81
CLDN9O95484 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.74□□□□□ -1.81
CLDN9O95484 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.74□□□□□ -1.81
CLDN9O95484 U6.107-201ENST00000637108 79 ntBASIC3.74□□□□□ -1.81
CLDN9O95484 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CLDN9O95484 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CLDN9O95484 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CLDN9O95484 AL136964.1-201ENST00000622038 2990 ntBASIC3.74□□□□□ -1.81
CLDN9O95484 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.74□□□□□ -1.81
CLDN9O95484 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CLDN9O95484 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CLDN9O95484 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.73□□□□□ -1.81
CLDN9O95484 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
CLDN9O95484 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC3.73□□□□□ -1.81
CLDN9O95484 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
CLDN9O95484 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CLDN9O95484 RNA5SP515-201ENST00000364570 118 ntBASIC3.73□□□□□ -1.81
CLDN9O95484 RNA5SP97-201ENST00000365006 84 ntBASIC3.73□□□□□ -1.81
CLDN9O95484 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.73□□□□□ -1.81
CLDN9O95484 MIR124-3-201ENST00000384866 87 ntBASIC3.73□□□□□ -1.81
CLDN9O95484 HMGB3P18-201ENST00000406327 590 ntBASIC3.73□□□□□ -1.81
CLDN9O95484 RN7SKP177-201ENST00000410567 355 ntBASIC3.73□□□□□ -1.81
CLDN9O95484 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC3.73□□□□□ -1.81
CLDN9O95484 ELOCP6-201ENST00000429066 328 ntBASIC3.73□□□□□ -1.81
CLDN9O95484 IFNNP1-201ENST00000429219 553 ntBASIC3.73□□□□□ -1.81
CLDN9O95484 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.73□□□□□ -1.81
CLDN9O95484 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC3.73□□□□□ -1.81
CLDN9O95484 AL645939.1-201ENST00000453429 797 ntBASIC3.73□□□□□ -1.81
CLDN9O95484 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.73□□□□□ -1.81
CLDN9O95484 AL133477.1-201ENST00000457472 514 ntBASIC3.73□□□□□ -1.81
CLDN9O95484 ELOCP12-201ENST00000458706 328 ntBASIC3.73□□□□□ -1.81
CLDN9O95484 RPL37P6-202ENST00000464216 403 ntBASIC3.73□□□□□ -1.81
CLDN9O95484 AC108729.2-201ENST00000476543 840 ntBASIC3.73□□□□□ -1.81
CLDN9O95484 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.73□□□□□ -1.81
CLDN9O95484 AL035404.1-201ENST00000497982 568 ntBASIC3.73□□□□□ -1.81
CLDN9O95484 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC3.73□□□□□ -1.81
CLDN9O95484 RN7SKP283-201ENST00000517197 270 ntBASIC3.73□□□□□ -1.81
CLDN9O95484 NARSP2-201ENST00000518524 679 ntBASIC3.73□□□□□ -1.81
CLDN9O95484 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.73□□□□□ -1.81
CLDN9O95484 AC008802.1-201ENST00000519121 791 ntBASIC3.73□□□□□ -1.81
CLDN9O95484 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC3.73□□□□□ -1.81
CLDN9O95484 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.73□□□□□ -1.81
CLDN9O95484 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.73□□□□□ -1.81
CLDN9O95484 AC007424.1-203ENST00000554613 687 ntBASIC3.73□□□□□ -1.81
CLDN9O95484 AC025918.2-201ENST00000558683 763 ntBASIC3.73□□□□□ -1.81
CLDN9O95484 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.73□□□□□ -1.81
CLDN9O95484 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CLDN9O95484 AC083899.3-201ENST00000603413 594 ntBASIC3.73□□□□□ -1.81
CLDN9O95484 AC067959.1-201ENST00000604334 379 ntBASIC3.73□□□□□ -1.81
CLDN9O95484 AL390816.3-201ENST00000604527 1066 ntBASIC3.73□□□□□ -1.81
CLDN9O95484 AC115621.1-201ENST00000604653 858 ntBASIC3.73□□□□□ -1.81
CLDN9O95484 AL392112.1-201ENST00000605115 829 ntBASIC3.73□□□□□ -1.81
CLDN9O95484 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CLDN9O95484 AC091905.1-201ENST00000624400 311 ntBASIC3.73□□□□□ -1.81
CLDN9O95484 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC3.73□□□□□ -1.81
CLDN9O95484 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC3.73□□□□□ -1.81
CLDN9O95484 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.73□□□□□ -1.81
CLDN9O95484 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.73□□□□□ -1.81
CLDN9O95484 LINC00561-201ENST00000565815 2738 ntBASIC3.73□□□□□ -1.81
CLDN9O95484 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.73□□□□□ -1.81
CLDN9O95484 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.72□□□□□ -1.81
CLDN9O95484 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CLDN9O95484 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.72□□□□□ -1.81
CLDN9O95484 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CLDN9O95484 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.72□□□□□ -1.81
CLDN9O95484 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
CLDN9O95484 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
CLDN9O95484 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC3.72□□□□□ -1.81
CLDN9O95484 HYKK-202ENST00000408962 847 ntTSL 5 BASIC3.72□□□□□ -1.81
CLDN9O95484 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.72□□□□□ -1.81
CLDN9O95484 RNU2-65P-201ENST00000410162 185 ntBASIC3.72□□□□□ -1.81
CLDN9O95484 TATDN1P1-201ENST00000414123 891 ntBASIC3.72□□□□□ -1.81
CLDN9O95484 AC114814.2-201ENST00000419195 485 ntBASIC3.72□□□□□ -1.81
CLDN9O95484 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC3.72□□□□□ -1.81
CLDN9O95484 AC093698.1-201ENST00000423843 571 ntBASIC3.72□□□□□ -1.81
CLDN9O95484 RPS7P5-201ENST00000441482 581 ntBASIC3.72□□□□□ -1.81
CLDN9O95484 AP000926.1-201ENST00000479573 241 ntBASIC3.72□□□□□ -1.81
CLDN9O95484 TRBV12-2-201ENST00000489763 344 ntBASIC3.72□□□□□ -1.81
CLDN9O95484 AC106872.2-201ENST00000494303 480 ntBASIC3.72□□□□□ -1.81
CLDN9O95484 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC3.72□□□□□ -1.81
CLDN9O95484 AC108941.1-201ENST00000502853 530 ntBASIC3.72□□□□□ -1.81
CLDN9O95484 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC3.72□□□□□ -1.81
CLDN9O95484 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.72□□□□□ -1.81
CLDN9O95484 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.72□□□□□ -1.81
CLDN9O95484 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.72□□□□□ -1.81
CLDN9O95484 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.72□□□□□ -1.81
CLDN9O95484 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC3.72□□□□□ -1.81
CLDN9O95484 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC3.72□□□□□ -1.81
CLDN9O95484 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC3.72□□□□□ -1.81
CLDN9O95484 HYKK-203ENST00000563233 734 ntTSL 2 BASIC3.72□□□□□ -1.81
CLDN9O95484 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC3.72□□□□□ -1.81
CLDN9O95484 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.72□□□□□ -1.81
CLDN9O95484 AC020914.4-201ENST00000597690 277 ntBASIC3.72□□□□□ -1.81
CLDN9O95484 NTAN1P1-201ENST00000603150 646 ntBASIC3.72□□□□□ -1.81
CLDN9O95484 OR4H6P-202ENST00000603819 340 ntBASIC3.72□□□□□ -1.81
CLDN9O95484 AL592436.1-201ENST00000605135 558 ntBASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 120.1 ms