Protein–RNA interactions for Protein: O43365

HOXA3, Homeobox protein Hox-A3, humanhuman

Predicted RBP Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3O43365 PABPC1P3-201ENST00000469174 459 ntBASIC4.66□□□□□ -1.66
HOXA3O43365 RPS17P15-201ENST00000475609 349 ntBASIC4.66□□□□□ -1.66
HOXA3O43365 OARD1-211ENST00000480585 829 ntTSL 3 BASIC4.66□□□□□ -1.66
HOXA3O43365 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC4.66□□□□□ -1.66
HOXA3O43365 AP001025.2-201ENST00000490908 477 ntBASIC4.66□□□□□ -1.66
HOXA3O43365 HMGN1P12-201ENST00000499125 195 ntBASIC4.66□□□□□ -1.66
HOXA3O43365 AC008945.1-201ENST00000505144 499 ntBASIC4.66□□□□□ -1.66
HOXA3O43365 MTCO1P35-201ENST00000515270 228 ntBASIC4.66□□□□□ -1.66
HOXA3O43365 BX510359.5-201ENST00000515651 304 ntBASIC4.66□□□□□ -1.66
HOXA3O43365 RNU6-714P-201ENST00000516963 103 ntBASIC4.66□□□□□ -1.66
HOXA3O43365 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC4.66□□□□□ -1.66
HOXA3O43365 AC022616.6-201ENST00000520479 119 ntBASIC4.66□□□□□ -1.66
HOXA3O43365 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC4.66□□□□□ -1.66
HOXA3O43365 AL359212.1-201ENST00000556608 614 ntBASIC4.66□□□□□ -1.66
HOXA3O43365 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC4.66□□□□□ -1.66
HOXA3O43365 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC4.66□□□□□ -1.66
HOXA3O43365 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC4.66□□□□□ -1.66
HOXA3O43365 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC4.66□□□□□ -1.66
HOXA3O43365 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC4.66□□□□□ -1.66
HOXA3O43365 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC4.66□□□□□ -1.66
HOXA3O43365 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC4.66□□□□□ -1.66
HOXA3O43365 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.66□□□□□ -1.66
HOXA3O43365 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC4.66□□□□□ -1.66
HOXA3O43365 MIR132-201ENST00000591554 101 ntBASIC4.66□□□□□ -1.66
HOXA3O43365 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HOXA3O43365 AC011468.4-201ENST00000603942 409 ntBASIC4.66□□□□□ -1.66
HOXA3O43365 AL009028.1-201ENST00000604895 802 ntBASIC4.66□□□□□ -1.66
HOXA3O43365 OR10AB1P-201ENST00000609613 938 ntBASIC4.66□□□□□ -1.66
HOXA3O43365 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC4.66□□□□□ -1.66
HOXA3O43365 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC4.66□□□□□ -1.66
HOXA3O43365 AL133173.2-201ENST00000614270 90 ntBASIC4.66□□□□□ -1.66
HOXA3O43365 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HOXA3O43365 AC068722.2-201ENST00000618734 544 ntBASIC4.66□□□□□ -1.66
HOXA3O43365 CU639417.4-201ENST00000623928 207 ntBASIC4.66□□□□□ -1.66
HOXA3O43365 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC4.66□□□□□ -1.66
HOXA3O43365 MIR3662-201ENST00000637030 95 ntBASIC4.66□□□□□ -1.66
HOXA3O43365 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HOXA3O43365 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
HOXA3O43365 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC4.66□□□□□ -1.66
HOXA3O43365 AC024560.2-201ENST00000507981 1497 ntBASIC4.66□□□□□ -1.66
HOXA3O43365 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC4.66□□□□□ -1.66
HOXA3O43365 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HOXA3O43365 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HOXA3O43365 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.66□□□□□ -1.66
HOXA3O43365 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.66□□□□□ -1.66
HOXA3O43365 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.66□□□□□ -1.66
HOXA3O43365 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.66□□□□□ -1.66
HOXA3O43365 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.66□□□□□ -1.66
HOXA3O43365 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC4.66□□□□□ -1.66
HOXA3O43365 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HOXA3O43365 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.66
HOXA3O43365 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
HOXA3O43365 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
HOXA3O43365 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
HOXA3O43365 AC004158.1-201ENST00000564508 4319 ntBASIC4.65□□□□□ -1.66
HOXA3O43365 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
HOXA3O43365 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
HOXA3O43365 AC093671.1-201ENST00000624981 2929 ntBASIC4.65□□□□□ -1.66
HOXA3O43365 KPNA2P2-201ENST00000419546 1489 ntBASIC4.65□□□□□ -1.66
HOXA3O43365 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC4.65□□□□□ -1.66
HOXA3O43365 RN7SKP124-201ENST00000364730 341 ntBASIC4.65□□□□□ -1.67
HOXA3O43365 RNU6-730P-201ENST00000383954 104 ntBASIC4.65□□□□□ -1.67
HOXA3O43365 Y_RNA.481-201ENST00000384373 102 ntBASIC4.65□□□□□ -1.67
HOXA3O43365 AL603766.1-201ENST00000407763 664 ntBASIC4.65□□□□□ -1.67
HOXA3O43365 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.65□□□□□ -1.67
HOXA3O43365 MTCO2P5-201ENST00000422621 426 ntBASIC4.65□□□□□ -1.67
HOXA3O43365 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC4.65□□□□□ -1.67
HOXA3O43365 MTND1P14-201ENST00000427400 950 ntBASIC4.65□□□□□ -1.67
HOXA3O43365 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC4.65□□□□□ -1.67
HOXA3O43365 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC4.65□□□□□ -1.67
HOXA3O43365 RPS26P56-201ENST00000444468 240 ntBASIC4.65□□□□□ -1.67
HOXA3O43365 AL162739.1-201ENST00000450606 307 ntBASIC4.65□□□□□ -1.67
HOXA3O43365 AC243772.1-201ENST00000451620 410 ntBASIC4.65□□□□□ -1.67
HOXA3O43365 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC4.65□□□□□ -1.67
HOXA3O43365 TRBV26-201ENST00000456572 344 ntBASIC4.65□□□□□ -1.67
HOXA3O43365 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.65□□□□□ -1.67
HOXA3O43365 RPL32P33-201ENST00000487023 394 ntBASIC4.65□□□□□ -1.67
HOXA3O43365 AC023194.1-201ENST00000493084 308 ntBASIC4.65□□□□□ -1.67
HOXA3O43365 AC034222.1-201ENST00000494052 532 ntBASIC4.65□□□□□ -1.67
HOXA3O43365 AC108693.1-201ENST00000496068 432 ntBASIC4.65□□□□□ -1.67
HOXA3O43365 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC4.65□□□□□ -1.67
HOXA3O43365 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.65□□□□□ -1.67
HOXA3O43365 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC4.65□□□□□ -1.67
HOXA3O43365 AC114786.4-201ENST00000508771 728 ntBASIC4.65□□□□□ -1.67
HOXA3O43365 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC4.65□□□□□ -1.67
HOXA3O43365 LRRC34P2-201ENST00000514850 553 ntBASIC4.65□□□□□ -1.67
HOXA3O43365 AC097486.1-201ENST00000515331 210 ntBASIC4.65□□□□□ -1.67
HOXA3O43365 RNU6-1281P-201ENST00000516223 105 ntBASIC4.65□□□□□ -1.67
HOXA3O43365 RN7SKP288-201ENST00000516227 268 ntBASIC4.65□□□□□ -1.67
HOXA3O43365 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.65□□□□□ -1.67
HOXA3O43365 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC4.65□□□□□ -1.67
HOXA3O43365 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC4.65□□□□□ -1.67
HOXA3O43365 AC027026.1-201ENST00000532323 742 ntBASIC4.65□□□□□ -1.67
HOXA3O43365 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.65□□□□□ -1.67
HOXA3O43365 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC4.65□□□□□ -1.67
HOXA3O43365 SMARCE1P3-201ENST00000553649 1231 ntBASIC4.65□□□□□ -1.67
HOXA3O43365 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC4.65□□□□□ -1.67
HOXA3O43365 AC007342.5-201ENST00000571340 2142 ntBASIC4.65□□□□□ -1.67
HOXA3O43365 SUMO2P15-201ENST00000604285 278 ntBASIC4.65□□□□□ -1.67
HOXA3O43365 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms