Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.42□□□□□ -1.86
UPK1AO00322 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.42□□□□□ -1.86
UPK1AO00322 AC023161.2-201ENST00000551218 780 ntBASIC3.42□□□□□ -1.86
UPK1AO00322 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC3.42□□□□□ -1.86
UPK1AO00322 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC3.42□□□□□ -1.86
UPK1AO00322 TRAV15-201ENST00000556680 249 ntBASIC3.42□□□□□ -1.86
UPK1AO00322 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.42□□□□□ -1.86
UPK1AO00322 AC009318.3-201ENST00000616916 503 ntBASIC3.42□□□□□ -1.86
UPK1AO00322 AL391597.1-201ENST00000618707 694 ntBASIC3.42□□□□□ -1.86
UPK1AO00322 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC3.42□□□□□ -1.86
UPK1AO00322 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC3.42□□□□□ -1.86
UPK1AO00322 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
UPK1AO00322 AL732372.2-225ENST00000642124 456 ntBASIC3.42□□□□□ -1.86
UPK1AO00322 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC3.42□□□□□ -1.86
UPK1AO00322 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.42□□□□□ -1.86
UPK1AO00322 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
UPK1AO00322 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.42□□□□□ -1.86
UPK1AO00322 AC006042.3-201ENST00000454684 1469 ntBASIC3.41□□□□□ -1.86
UPK1AO00322 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
UPK1AO00322 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.41□□□□□ -1.86
UPK1AO00322 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
UPK1AO00322 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
UPK1AO00322 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.41□□□□□ -1.86
UPK1AO00322 U8.11-201ENST00000384699 133 ntBASIC3.41□□□□□ -1.86
UPK1AO00322 U8.12-201ENST00000384701 133 ntBASIC3.41□□□□□ -1.86
UPK1AO00322 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC3.41□□□□□ -1.86
UPK1AO00322 MIR1193-201ENST00000408109 78 ntBASIC3.41□□□□□ -1.86
UPK1AO00322 RNA5SP498-201ENST00000411342 120 ntBASIC3.41□□□□□ -1.86
UPK1AO00322 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC3.41□□□□□ -1.86
UPK1AO00322 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
UPK1AO00322 NIPA2P1-201ENST00000426223 976 ntBASIC3.41□□□□□ -1.86
UPK1AO00322 NPM1P24-201ENST00000428039 894 ntBASIC3.41□□□□□ -1.86
UPK1AO00322 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC3.41□□□□□ -1.86
UPK1AO00322 BX679664.1-201ENST00000434429 253 ntBASIC3.41□□□□□ -1.86
UPK1AO00322 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
UPK1AO00322 MTCYBP12-201ENST00000440559 1134 ntBASIC3.41□□□□□ -1.86
UPK1AO00322 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.41□□□□□ -1.86
UPK1AO00322 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.41□□□□□ -1.86
UPK1AO00322 U8.18-201ENST00000459285 133 ntBASIC3.41□□□□□ -1.86
UPK1AO00322 RPL7P48-201ENST00000461513 746 ntBASIC3.41□□□□□ -1.86
UPK1AO00322 AC093267.1-201ENST00000489176 961 ntBASIC3.41□□□□□ -1.86
UPK1AO00322 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC3.41□□□□□ -1.86
UPK1AO00322 PCNAP1-201ENST00000505363 709 ntBASIC3.41□□□□□ -1.86
UPK1AO00322 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.41□□□□□ -1.86
UPK1AO00322 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
UPK1AO00322 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.41□□□□□ -1.86
UPK1AO00322 ACTR6P1-201ENST00000514311 1104 ntBASIC3.41□□□□□ -1.86
UPK1AO00322 SNORA70.17-201ENST00000516449 133 ntBASIC3.41□□□□□ -1.86
UPK1AO00322 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.41□□□□□ -1.86
UPK1AO00322 HIGD1AP18-201ENST00000520730 278 ntBASIC3.41□□□□□ -1.86
UPK1AO00322 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.41□□□□□ -1.86
UPK1AO00322 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC3.41□□□□□ -1.86
UPK1AO00322 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.41□□□□□ -1.86
UPK1AO00322 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC3.41□□□□□ -1.86
UPK1AO00322 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC3.41□□□□□ -1.86
UPK1AO00322 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
UPK1AO00322 AL732618.1-201ENST00000623251 301 ntBASIC3.41□□□□□ -1.86
UPK1AO00322 AC009452.1-201ENST00000640823 606 ntBASIC3.41□□□□□ -1.86
UPK1AO00322 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
UPK1AO00322 AL359715.4-201ENST00000606629 1436 ntBASIC3.41□□□□□ -1.86
UPK1AO00322 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
UPK1AO00322 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.41□□□□□ -1.86
UPK1AO00322 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
UPK1AO00322 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
UPK1AO00322 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
UPK1AO00322 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
UPK1AO00322 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.4□□□□□ -1.86
UPK1AO00322 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
UPK1AO00322 ASNSP1-204ENST00000641977 1664 ntBASIC3.4□□□□□ -1.86
UPK1AO00322 AC068647.1-201ENST00000489539 2265 ntBASIC3.4□□□□□ -1.86
UPK1AO00322 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.86
UPK1AO00322 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
UPK1AO00322 XIAPP3-201ENST00000312918 795 ntBASIC3.4□□□□□ -1.87
UPK1AO00322 RNA5SP235-201ENST00000365411 114 ntBASIC3.4□□□□□ -1.87
UPK1AO00322 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.4□□□□□ -1.87
UPK1AO00322 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
UPK1AO00322 SNORA57.1-201ENST00000391227 145 ntBASIC3.4□□□□□ -1.87
UPK1AO00322 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
UPK1AO00322 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC3.4□□□□□ -1.87
UPK1AO00322 RPS7P13-201ENST00000413955 498 ntBASIC3.4□□□□□ -1.87
UPK1AO00322 LIPT1P1-201ENST00000415870 1186 ntBASIC3.4□□□□□ -1.87
UPK1AO00322 AC245054.1-201ENST00000420944 258 ntBASIC3.4□□□□□ -1.87
UPK1AO00322 RPL31P12-201ENST00000422587 358 ntBASIC3.4□□□□□ -1.87
UPK1AO00322 SDCBPP2-201ENST00000424643 885 ntBASIC3.4□□□□□ -1.87
UPK1AO00322 NDUFA5P10-201ENST00000432147 357 ntBASIC3.4□□□□□ -1.87
UPK1AO00322 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC3.4□□□□□ -1.87
UPK1AO00322 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.4□□□□□ -1.87
UPK1AO00322 AC245517.2-201ENST00000442890 346 ntBASIC3.4□□□□□ -1.87
UPK1AO00322 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.4□□□□□ -1.87
UPK1AO00322 AL157827.1-201ENST00000447622 132 ntBASIC3.4□□□□□ -1.87
UPK1AO00322 AC010655.1-201ENST00000449336 292 ntBASIC3.4□□□□□ -1.87
UPK1AO00322 RPS4XP2-201ENST00000458402 793 ntBASIC3.4□□□□□ -1.87
UPK1AO00322 RPL6P9-201ENST00000466502 859 ntBASIC3.4□□□□□ -1.87
UPK1AO00322 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC3.4□□□□□ -1.87
UPK1AO00322 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC3.4□□□□□ -1.87
UPK1AO00322 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC3.4□□□□□ -1.87
UPK1AO00322 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.4□□□□□ -1.87
UPK1AO00322 RFESD-208ENST00000513950 464 ntTSL 5 BASIC3.4□□□□□ -1.87
UPK1AO00322 RNU6-1308P-201ENST00000516817 103 ntBASIC3.4□□□□□ -1.87
UPK1AO00322 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms