Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 AL139811.1-201ENST00000424779 2299 ntBASIC3.92□□□□□ -1.78
PDLIM1O00151 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
PDLIM1O00151 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
PDLIM1O00151 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.92□□□□□ -1.78
PDLIM1O00151 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
PDLIM1O00151 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
PDLIM1O00151 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
PDLIM1O00151 HSPA8P19-201ENST00000505359 1517 ntBASIC3.91□□□□□ -1.78
PDLIM1O00151 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
PDLIM1O00151 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
PDLIM1O00151 OR5P1P-201ENST00000299512 925 ntBASIC3.91□□□□□ -1.78
PDLIM1O00151 AC126755.2-208ENST00000327792 462 ntBASIC3.91□□□□□ -1.78
PDLIM1O00151 AC138969.1-213ENST00000331436 462 ntBASIC3.91□□□□□ -1.78
PDLIM1O00151 MIR141-201ENST00000384975 95 ntBASIC3.91□□□□□ -1.78
PDLIM1O00151 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
PDLIM1O00151 AC234782.4-201ENST00000417646 1048 ntBASIC3.91□□□□□ -1.78
PDLIM1O00151 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC3.91□□□□□ -1.78
PDLIM1O00151 RPS15AP6-201ENST00000420703 385 ntBASIC3.91□□□□□ -1.78
PDLIM1O00151 AL592293.2-201ENST00000422292 996 ntBASIC3.91□□□□□ -1.78
PDLIM1O00151 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC3.91□□□□□ -1.78
PDLIM1O00151 AC009480.2-201ENST00000422916 432 ntBASIC3.91□□□□□ -1.78
PDLIM1O00151 AL031736.2-201ENST00000426573 787 ntBASIC3.91□□□□□ -1.78
PDLIM1O00151 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC3.91□□□□□ -1.78
PDLIM1O00151 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
PDLIM1O00151 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
PDLIM1O00151 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
PDLIM1O00151 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC3.91□□□□□ -1.78
PDLIM1O00151 AL035407.2-201ENST00000454090 378 ntBASIC3.91□□□□□ -1.78
PDLIM1O00151 RPL37P3-201ENST00000456825 293 ntBASIC3.91□□□□□ -1.78
PDLIM1O00151 RPL32P14-201ENST00000463196 378 ntBASIC3.91□□□□□ -1.78
PDLIM1O00151 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC3.91□□□□□ -1.78
PDLIM1O00151 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC3.91□□□□□ -1.78
PDLIM1O00151 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.91□□□□□ -1.78
PDLIM1O00151 BNIP3P41-201ENST00000503774 571 ntBASIC3.91□□□□□ -1.78
PDLIM1O00151 AC106806.2-201ENST00000509365 500 ntBASIC3.91□□□□□ -1.78
PDLIM1O00151 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC3.91□□□□□ -1.78
PDLIM1O00151 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.91□□□□□ -1.78
PDLIM1O00151 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.91□□□□□ -1.78
PDLIM1O00151 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC3.91□□□□□ -1.78
PDLIM1O00151 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.91□□□□□ -1.78
PDLIM1O00151 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC3.91□□□□□ -1.78
PDLIM1O00151 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC3.91□□□□□ -1.78
PDLIM1O00151 AC063950.1-201ENST00000552036 308 ntBASIC3.91□□□□□ -1.78
PDLIM1O00151 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC3.91□□□□□ -1.78
PDLIM1O00151 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC3.91□□□□□ -1.78
PDLIM1O00151 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.91□□□□□ -1.78
PDLIM1O00151 CYP2C60P-201ENST00000566088 139 ntBASIC3.91□□□□□ -1.78
PDLIM1O00151 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.91□□□□□ -1.78
PDLIM1O00151 MTND4LP24-201ENST00000572277 291 ntBASIC3.91□□□□□ -1.78
PDLIM1O00151 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC3.91□□□□□ -1.78
PDLIM1O00151 MIR4284-201ENST00000578924 81 ntBASIC3.91□□□□□ -1.78
PDLIM1O00151 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.91□□□□□ -1.78
PDLIM1O00151 AC073569.3-201ENST00000619055 682 ntBASIC3.91□□□□□ -1.78
PDLIM1O00151 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.91□□□□□ -1.78
PDLIM1O00151 AL590396.2-201ENST00000636511 1041 ntBASIC3.91□□□□□ -1.78
PDLIM1O00151 AC008013.2-202ENST00000637965 364 ntBASIC3.91□□□□□ -1.78
PDLIM1O00151 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
PDLIM1O00151 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC3.91□□□□□ -1.78
PDLIM1O00151 MFSD8-213ENST00000641134 1327 ntBASIC3.91□□□□□ -1.78
PDLIM1O00151 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
PDLIM1O00151 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.9□□□□□ -1.78
PDLIM1O00151 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC3.9□□□□□ -1.78
PDLIM1O00151 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.9□□□□□ -1.78
PDLIM1O00151 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
PDLIM1O00151 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.9□□□□□ -1.78
PDLIM1O00151 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
PDLIM1O00151 AC008033.1-201ENST00000216407 1162 ntBASIC3.9□□□□□ -1.79
PDLIM1O00151 SNORD56.4-201ENST00000363883 71 ntBASIC3.9□□□□□ -1.79
PDLIM1O00151 RNA5SP175-201ENST00000364275 119 ntBASIC3.9□□□□□ -1.79
PDLIM1O00151 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC3.9□□□□□ -1.79
PDLIM1O00151 OR52E6-202ENST00000379946 954 ntBASIC3.9□□□□□ -1.79
PDLIM1O00151 ATP5F1P4-201ENST00000397288 746 ntBASIC3.9□□□□□ -1.79
PDLIM1O00151 AL583835.1-201ENST00000399570 407 ntBASIC3.9□□□□□ -1.79
PDLIM1O00151 AC136624.1-201ENST00000400791 413 ntBASIC3.9□□□□□ -1.79
PDLIM1O00151 HMGB3P31-201ENST00000413333 595 ntBASIC3.9□□□□□ -1.79
PDLIM1O00151 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC3.9□□□□□ -1.79
PDLIM1O00151 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC3.9□□□□□ -1.79
PDLIM1O00151 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.9□□□□□ -1.79
PDLIM1O00151 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC3.9□□□□□ -1.79
PDLIM1O00151 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC3.9□□□□□ -1.79
PDLIM1O00151 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC3.9□□□□□ -1.79
PDLIM1O00151 RPL23AP24-201ENST00000458203 385 ntBASIC3.9□□□□□ -1.79
PDLIM1O00151 AL049829.1-201ENST00000465411 156 ntBASIC3.9□□□□□ -1.79
PDLIM1O00151 AL161747.1-201ENST00000480068 358 ntBASIC3.9□□□□□ -1.79
PDLIM1O00151 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC3.9□□□□□ -1.79
PDLIM1O00151 RN7SL810P-201ENST00000493031 276 ntBASIC3.9□□□□□ -1.79
PDLIM1O00151 CEACAMP10-202ENST00000495431 496 ntBASIC3.9□□□□□ -1.79
PDLIM1O00151 AC016550.1-201ENST00000505348 785 ntBASIC3.9□□□□□ -1.79
PDLIM1O00151 AC121161.1-201ENST00000510606 652 ntBASIC3.9□□□□□ -1.79
PDLIM1O00151 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC3.9□□□□□ -1.79
PDLIM1O00151 ARL2BPP6-201ENST00000512757 439 ntBASIC3.9□□□□□ -1.79
PDLIM1O00151 RN7SKP82-201ENST00000516786 223 ntBASIC3.9□□□□□ -1.79
PDLIM1O00151 OR4A2P-201ENST00000527276 913 ntBASIC3.9□□□□□ -1.79
PDLIM1O00151 AC009643.1-201ENST00000532030 391 ntBASIC3.9□□□□□ -1.79
PDLIM1O00151 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
PDLIM1O00151 OR4U1P-201ENST00000554958 912 ntBASIC3.9□□□□□ -1.79
PDLIM1O00151 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC3.9□□□□□ -1.79
PDLIM1O00151 AC027104.1-201ENST00000563702 681 ntBASIC3.9□□□□□ -1.79
PDLIM1O00151 AC090751.1-201ENST00000566966 267 ntBASIC3.9□□□□□ -1.79
PDLIM1O00151 AC090079.2-201ENST00000575289 768 ntBASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms