Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
TRIM49D1C9J1S8 SNORA3.3-201ENST00000408712 125 ntBASIC3.63□□□□□ -1.83
TRIM49D1C9J1S8 RN7SKP285-201ENST00000410137 318 ntBASIC3.63□□□□□ -1.83
TRIM49D1C9J1S8 RNA5SP317-201ENST00000410176 116 ntBASIC3.63□□□□□ -1.83
TRIM49D1C9J1S8 RNA5SP311-201ENST00000411290 116 ntBASIC3.63□□□□□ -1.83
TRIM49D1C9J1S8 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC3.63□□□□□ -1.83
TRIM49D1C9J1S8 OSTCP5-201ENST00000425293 453 ntBASIC3.63□□□□□ -1.83
TRIM49D1C9J1S8 AC004975.1-201ENST00000428733 208 ntBASIC3.63□□□□□ -1.83
TRIM49D1C9J1S8 UBE2V1P6-201ENST00000430840 422 ntBASIC3.63□□□□□ -1.83
TRIM49D1C9J1S8 MRPS18BP2-201ENST00000434310 759 ntBASIC3.63□□□□□ -1.83
TRIM49D1C9J1S8 EXTL2P1-201ENST00000446218 416 ntBASIC3.63□□□□□ -1.83
TRIM49D1C9J1S8 ANP32BP2-201ENST00000454525 545 ntBASIC3.63□□□□□ -1.83
TRIM49D1C9J1S8 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.63□□□□□ -1.83
TRIM49D1C9J1S8 METTL15P1-201ENST00000481421 1045 ntBASIC3.63□□□□□ -1.83
TRIM49D1C9J1S8 MTND3P24-201ENST00000506306 329 ntBASIC3.63□□□□□ -1.83
TRIM49D1C9J1S8 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC3.63□□□□□ -1.83
TRIM49D1C9J1S8 HMGB1P47-201ENST00000511281 589 ntBASIC3.63□□□□□ -1.83
TRIM49D1C9J1S8 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.63□□□□□ -1.83
TRIM49D1C9J1S8 RNA5SP315-201ENST00000516340 116 ntBASIC3.63□□□□□ -1.83
TRIM49D1C9J1S8 RN7SKP60-201ENST00000516985 239 ntBASIC3.63□□□□□ -1.83
TRIM49D1C9J1S8 RNA5SP312-201ENST00000517068 116 ntBASIC3.63□□□□□ -1.83
TRIM49D1C9J1S8 IGLVIV-66-1-201ENST00000521832 460 ntBASIC3.63□□□□□ -1.83
TRIM49D1C9J1S8 AP006245.1-201ENST00000522549 120 ntBASIC3.63□□□□□ -1.83
TRIM49D1C9J1S8 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC3.63□□□□□ -1.83
TRIM49D1C9J1S8 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.63□□□□□ -1.83
TRIM49D1C9J1S8 AL139174.1-201ENST00000531489 886 ntBASIC3.63□□□□□ -1.83
TRIM49D1C9J1S8 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
TRIM49D1C9J1S8 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC3.63□□□□□ -1.83
TRIM49D1C9J1S8 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.63□□□□□ -1.83
TRIM49D1C9J1S8 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.63□□□□□ -1.83
TRIM49D1C9J1S8 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC3.63□□□□□ -1.83
TRIM49D1C9J1S8 AL136520.1-202ENST00000555494 763 ntBASIC3.63□□□□□ -1.83
TRIM49D1C9J1S8 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC3.63□□□□□ -1.83
TRIM49D1C9J1S8 AL606490.9-201ENST00000603331 271 ntBASIC3.63□□□□□ -1.83
TRIM49D1C9J1S8 AL671309.1-201ENST00000603750 544 ntBASIC3.63□□□□□ -1.83
TRIM49D1C9J1S8 AL391261.4-201ENST00000616012 481 ntBASIC3.63□□□□□ -1.83
TRIM49D1C9J1S8 AC068831.8-201ENST00000620171 435 ntBASIC3.63□□□□□ -1.83
TRIM49D1C9J1S8 FP236240.3-201ENST00000623061 327 ntBASIC3.63□□□□□ -1.83
TRIM49D1C9J1S8 AL732618.1-201ENST00000623251 301 ntBASIC3.63□□□□□ -1.83
TRIM49D1C9J1S8 AC019080.5-201ENST00000624891 757 ntBASIC3.63□□□□□ -1.83
TRIM49D1C9J1S8 AL138960.2-201ENST00000625145 535 ntBASIC3.63□□□□□ -1.83
TRIM49D1C9J1S8 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC3.63□□□□□ -1.83
TRIM49D1C9J1S8 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
TRIM49D1C9J1S8 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
TRIM49D1C9J1S8 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC3.63□□□□□ -1.83
TRIM49D1C9J1S8 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.63□□□□□ -1.83
TRIM49D1C9J1S8 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
TRIM49D1C9J1S8 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
TRIM49D1C9J1S8 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.62□□□□□ -1.83
TRIM49D1C9J1S8 FAM91A3P-201ENST00000456826 2544 ntBASIC3.62□□□□□ -1.83
TRIM49D1C9J1S8 AC068647.1-201ENST00000489539 2265 ntBASIC3.62□□□□□ -1.83
TRIM49D1C9J1S8 RNU1-87P-201ENST00000363727 170 ntBASIC3.62□□□□□ -1.83
TRIM49D1C9J1S8 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
TRIM49D1C9J1S8 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
TRIM49D1C9J1S8 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
TRIM49D1C9J1S8 SNORA70C-201ENST00000384538 135 ntBASIC3.62□□□□□ -1.83
TRIM49D1C9J1S8 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.62□□□□□ -1.83
TRIM49D1C9J1S8 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.62□□□□□ -1.83
TRIM49D1C9J1S8 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
TRIM49D1C9J1S8 MTCO2P1-201ENST00000424648 477 ntBASIC3.62□□□□□ -1.83
TRIM49D1C9J1S8 DPY19L1P2-201ENST00000426647 915 ntBASIC3.62□□□□□ -1.83
TRIM49D1C9J1S8 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC3.62□□□□□ -1.83
TRIM49D1C9J1S8 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.62□□□□□ -1.83
TRIM49D1C9J1S8 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC3.62□□□□□ -1.83
TRIM49D1C9J1S8 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC3.62□□□□□ -1.83
TRIM49D1C9J1S8 AC006326.1-201ENST00000445465 787 ntBASIC3.62□□□□□ -1.83
TRIM49D1C9J1S8 AC010655.1-201ENST00000449336 292 ntBASIC3.62□□□□□ -1.83
TRIM49D1C9J1S8 NIPA2P2-201ENST00000496376 1083 ntBASIC3.62□□□□□ -1.83
TRIM49D1C9J1S8 AC021087.2-201ENST00000504656 1203 ntBASIC3.62□□□□□ -1.83
TRIM49D1C9J1S8 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC3.62□□□□□ -1.83
TRIM49D1C9J1S8 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
TRIM49D1C9J1S8 AC112206.4-201ENST00000515142 405 ntBASIC3.62□□□□□ -1.83
TRIM49D1C9J1S8 RNU6-319P-201ENST00000516025 108 ntBASIC3.62□□□□□ -1.83
TRIM49D1C9J1S8 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC3.62□□□□□ -1.83
TRIM49D1C9J1S8 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC3.62□□□□□ -1.83
TRIM49D1C9J1S8 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
TRIM49D1C9J1S8 HMGB1P46-201ENST00000520062 610 ntBASIC3.62□□□□□ -1.83
TRIM49D1C9J1S8 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.62□□□□□ -1.83
TRIM49D1C9J1S8 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.62□□□□□ -1.83
TRIM49D1C9J1S8 TOMM20P2-201ENST00000540082 421 ntBASIC3.62□□□□□ -1.83
TRIM49D1C9J1S8 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC3.62□□□□□ -1.83
TRIM49D1C9J1S8 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC3.62□□□□□ -1.83
TRIM49D1C9J1S8 TGIF1P1-201ENST00000558095 802 ntBASIC3.62□□□□□ -1.83
TRIM49D1C9J1S8 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC3.62□□□□□ -1.83
TRIM49D1C9J1S8 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.62□□□□□ -1.83
TRIM49D1C9J1S8 AC005255.1-201ENST00000593748 216 ntBASIC3.62□□□□□ -1.83
TRIM49D1C9J1S8 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
TRIM49D1C9J1S8 AC244505.7-201ENST00000599675 272 ntBASIC3.62□□□□□ -1.83
TRIM49D1C9J1S8 BNIP3P38-201ENST00000601117 544 ntBASIC3.62□□□□□ -1.83
TRIM49D1C9J1S8 AC006077.1-201ENST00000604746 343 ntBASIC3.62□□□□□ -1.83
TRIM49D1C9J1S8 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.62□□□□□ -1.83
TRIM49D1C9J1S8 AC034236.3-201ENST00000605999 461 ntBASIC3.62□□□□□ -1.83
TRIM49D1C9J1S8 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC3.62□□□□□ -1.83
TRIM49D1C9J1S8 AC084036.1-201ENST00000609190 508 ntBASIC3.62□□□□□ -1.83
TRIM49D1C9J1S8 AC008121.2-201ENST00000614647 523 ntBASIC3.62□□□□□ -1.83
TRIM49D1C9J1S8 AC022149.2-201ENST00000621061 203 ntBASIC3.62□□□□□ -1.83
TRIM49D1C9J1S8 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.62□□□□□ -1.83
TRIM49D1C9J1S8 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC3.62□□□□□ -1.83
TRIM49D1C9J1S8 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
TRIM49D1C9J1S8 AC134882.1-201ENST00000603738 1676 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms