Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC2.79□□□□□ -1.96
HLA-DRB4X5D2U9 RN7SKP21-201ENST00000516503 220 ntBASIC2.79□□□□□ -1.96
HLA-DRB4X5D2U9 RNU6-352P-201ENST00000516908 107 ntBASIC2.79□□□□□ -1.96
HLA-DRB4X5D2U9 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC2.79□□□□□ -1.96
HLA-DRB4X5D2U9 AC022790.1-201ENST00000522872 204 ntBASIC2.79□□□□□ -1.96
HLA-DRB4X5D2U9 HIGD1AP10-201ENST00000527837 282 ntBASIC2.79□□□□□ -1.96
HLA-DRB4X5D2U9 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
HLA-DRB4X5D2U9 AC008011.1-201ENST00000545989 227 ntBASIC2.79□□□□□ -1.96
HLA-DRB4X5D2U9 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC2.79□□□□□ -1.96
HLA-DRB4X5D2U9 AC006960.3-201ENST00000561845 705 ntBASIC2.79□□□□□ -1.96
HLA-DRB4X5D2U9 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC2.79□□□□□ -1.96
HLA-DRB4X5D2U9 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC2.79□□□□□ -1.96
HLA-DRB4X5D2U9 AC087499.8-201ENST00000578406 226 ntBASIC2.79□□□□□ -1.96
HLA-DRB4X5D2U9 RN7SL703P-201ENST00000578485 302 ntBASIC2.79□□□□□ -1.96
HLA-DRB4X5D2U9 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC2.79□□□□□ -1.96
HLA-DRB4X5D2U9 AC067852.4-201ENST00000590314 478 ntBASIC2.79□□□□□ -1.96
HLA-DRB4X5D2U9 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC2.79□□□□□ -1.96
HLA-DRB4X5D2U9 SNORA62.6-201ENST00000606322 83 ntBASIC2.79□□□□□ -1.96
HLA-DRB4X5D2U9 AC099778.2-201ENST00000610904 211 ntBASIC2.79□□□□□ -1.96
HLA-DRB4X5D2U9 AC123768.4-201ENST00000616244 701 ntBASIC2.79□□□□□ -1.96
HLA-DRB4X5D2U9 AC018816.2-201ENST00000621460 353 ntBASIC2.79□□□□□ -1.96
HLA-DRB4X5D2U9 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC2.79□□□□□ -1.96
HLA-DRB4X5D2U9 FAM91A3P-201ENST00000456826 2544 ntBASIC2.79□□□□□ -1.96
HLA-DRB4X5D2U9 AP001148.1-201ENST00000624124 2359 ntBASIC2.79□□□□□ -1.96
HLA-DRB4X5D2U9 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
HLA-DRB4X5D2U9 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
HLA-DRB4X5D2U9 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
HLA-DRB4X5D2U9 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
HLA-DRB4X5D2U9 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
HLA-DRB4X5D2U9 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
HLA-DRB4X5D2U9 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
HLA-DRB4X5D2U9 MIR30B-201ENST00000384850 88 ntBASIC2.78□□□□□ -1.96
HLA-DRB4X5D2U9 SNORA81-201ENST00000408493 178 ntBASIC2.78□□□□□ -1.96
HLA-DRB4X5D2U9 RNU2-37P-201ENST00000410695 177 ntBASIC2.78□□□□□ -1.96
HLA-DRB4X5D2U9 RNU6-55P-201ENST00000411092 107 ntBASIC2.78□□□□□ -1.96
HLA-DRB4X5D2U9 RNU6-954P-201ENST00000411355 107 ntBASIC2.78□□□□□ -1.96
HLA-DRB4X5D2U9 TCEA1P4-201ENST00000415066 844 ntBASIC2.78□□□□□ -1.96
HLA-DRB4X5D2U9 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC2.78□□□□□ -1.96
HLA-DRB4X5D2U9 OSTCP5-201ENST00000425293 453 ntBASIC2.78□□□□□ -1.96
HLA-DRB4X5D2U9 AC009965.2-201ENST00000425328 970 ntBASIC2.78□□□□□ -1.96
HLA-DRB4X5D2U9 RPL7P2-201ENST00000427639 268 ntBASIC2.78□□□□□ -1.96
HLA-DRB4X5D2U9 NPM1P24-201ENST00000428039 894 ntBASIC2.78□□□□□ -1.96
HLA-DRB4X5D2U9 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC2.78□□□□□ -1.96
HLA-DRB4X5D2U9 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC2.78□□□□□ -1.96
HLA-DRB4X5D2U9 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC2.78□□□□□ -1.96
HLA-DRB4X5D2U9 AC099563.1-201ENST00000456086 418 ntBASIC2.78□□□□□ -1.96
HLA-DRB4X5D2U9 RPS27P29-201ENST00000463110 252 ntBASIC2.78□□□□□ -1.96
HLA-DRB4X5D2U9 ACTG1P13-201ENST00000486987 1043 ntBASIC2.78□□□□□ -1.96
HLA-DRB4X5D2U9 RN7SKP141-201ENST00000516167 338 ntBASIC2.78□□□□□ -1.96
HLA-DRB4X5D2U9 SCARNA14-201ENST00000516903 136 ntBASIC2.78□□□□□ -1.96
HLA-DRB4X5D2U9 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC2.78□□□□□ -1.96
HLA-DRB4X5D2U9 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC2.78□□□□□ -1.96
HLA-DRB4X5D2U9 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
HLA-DRB4X5D2U9 AL121766.1-201ENST00000547436 487 ntBASIC2.78□□□□□ -1.96
HLA-DRB4X5D2U9 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC2.78□□□□□ -1.96
HLA-DRB4X5D2U9 MIR5685-201ENST00000579080 79 ntBASIC2.78□□□□□ -1.96
HLA-DRB4X5D2U9 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC2.78□□□□□ -1.96
HLA-DRB4X5D2U9 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC2.78□□□□□ -1.96
HLA-DRB4X5D2U9 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC2.78□□□□□ -1.96
HLA-DRB4X5D2U9 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
HLA-DRB4X5D2U9 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
HLA-DRB4X5D2U9 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
HLA-DRB4X5D2U9 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
HLA-DRB4X5D2U9 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
HLA-DRB4X5D2U9 PDCD6IPP1-202ENST00000622242 1064 ntBASIC2.78□□□□□ -1.96
HLA-DRB4X5D2U9 BANCR-201ENST00000624238 473 ntTSL 2 BASIC2.78□□□□□ -1.96
HLA-DRB4X5D2U9 CDRT1-208ENST00000630868 794 ntBASIC2.78□□□□□ -1.96
HLA-DRB4X5D2U9 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
HLA-DRB4X5D2U9 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC2.78□□□□□ -1.96
HLA-DRB4X5D2U9 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
HLA-DRB4X5D2U9 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.97
HLA-DRB4X5D2U9 AL133383.2-201ENST00000622958 2336 ntBASIC2.77□□□□□ -1.97
HLA-DRB4X5D2U9 AC024560.2-201ENST00000507981 1497 ntBASIC2.77□□□□□ -1.97
HLA-DRB4X5D2U9 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
HLA-DRB4X5D2U9 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC2.77□□□□□ -1.97
HLA-DRB4X5D2U9 DCAF13P1-201ENST00000495256 1330 ntBASIC2.77□□□□□ -1.97
HLA-DRB4X5D2U9 OR4A15-201ENST00000314706 1035 ntBASIC2.77□□□□□ -1.97
HLA-DRB4X5D2U9 RNU1-75P-201ENST00000347264 129 ntBASIC2.77□□□□□ -1.97
HLA-DRB4X5D2U9 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
HLA-DRB4X5D2U9 RNU6-283P-201ENST00000364788 107 ntBASIC2.77□□□□□ -1.97
HLA-DRB4X5D2U9 RPL32P23-201ENST00000397237 405 ntBASIC2.77□□□□□ -1.97
HLA-DRB4X5D2U9 AL034374.1-201ENST00000406329 351 ntBASIC2.77□□□□□ -1.97
HLA-DRB4X5D2U9 RNA5SP293-201ENST00000410527 113 ntBASIC2.77□□□□□ -1.97
HLA-DRB4X5D2U9 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC2.77□□□□□ -1.97
HLA-DRB4X5D2U9 AC096644.3-201ENST00000416788 338 ntBASIC2.77□□□□□ -1.97
HLA-DRB4X5D2U9 MTND2P15-201ENST00000418575 892 ntBASIC2.77□□□□□ -1.97
HLA-DRB4X5D2U9 TCEA1P2-201ENST00000420496 906 ntBASIC2.77□□□□□ -1.97
HLA-DRB4X5D2U9 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC2.77□□□□□ -1.97
HLA-DRB4X5D2U9 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC2.77□□□□□ -1.97
HLA-DRB4X5D2U9 AL139247.1-201ENST00000422768 325 ntBASIC2.77□□□□□ -1.97
HLA-DRB4X5D2U9 RPS29P7-201ENST00000439662 171 ntBASIC2.77□□□□□ -1.97
HLA-DRB4X5D2U9 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC2.77□□□□□ -1.97
HLA-DRB4X5D2U9 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
HLA-DRB4X5D2U9 HMGB3P30-201ENST00000457863 606 ntBASIC2.77□□□□□ -1.97
HLA-DRB4X5D2U9 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC2.77□□□□□ -1.97
HLA-DRB4X5D2U9 ANK3-207ENST00000460468 677 ntTSL 3 BASIC2.77□□□□□ -1.97
HLA-DRB4X5D2U9 AC010401.1-201ENST00000463867 348 ntBASIC2.77□□□□□ -1.97
HLA-DRB4X5D2U9 RPS20P21-201ENST00000466859 343 ntBASIC2.77□□□□□ -1.97
HLA-DRB4X5D2U9 THAP6-203ENST00000502620 582 ntTSL 3 BASIC2.77□□□□□ -1.97
HLA-DRB4X5D2U9 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms