Protein–RNA interactions for Protein: Q9UI47

CTNNA3, Catenin alpha-3, humanhuman

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3Q9UI47 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.59□□□□□ -1.67
CTNNA3Q9UI47 OR4U1P-201ENST00000554958 912 ntBASIC4.59□□□□□ -1.67
CTNNA3Q9UI47 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.59□□□□□ -1.67
CTNNA3Q9UI47 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC4.59□□□□□ -1.67
CTNNA3Q9UI47 AC090877.1-201ENST00000561418 344 ntBASIC4.59□□□□□ -1.67
CTNNA3Q9UI47 HSPE1P5-201ENST00000561489 272 ntBASIC4.59□□□□□ -1.67
CTNNA3Q9UI47 AC115621.1-201ENST00000604653 858 ntBASIC4.59□□□□□ -1.67
CTNNA3Q9UI47 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC4.59□□□□□ -1.67
CTNNA3Q9UI47 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC4.59□□□□□ -1.67
CTNNA3Q9UI47 AC039056.2-201ENST00000622261 511 ntBASIC4.59□□□□□ -1.67
CTNNA3Q9UI47 AC007342.8-201ENST00000623278 678 ntBASIC4.59□□□□□ -1.67
CTNNA3Q9UI47 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.59□□□□□ -1.67
CTNNA3Q9UI47 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
CTNNA3Q9UI47 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
CTNNA3Q9UI47 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
CTNNA3Q9UI47 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.59□□□□□ -1.68
CTNNA3Q9UI47 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.59□□□□□ -1.68
CTNNA3Q9UI47 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CTNNA3Q9UI47 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.58□□□□□ -1.68
CTNNA3Q9UI47 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
CTNNA3Q9UI47 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CTNNA3Q9UI47 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.58□□□□□ -1.68
CTNNA3Q9UI47 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.58□□□□□ -1.68
CTNNA3Q9UI47 DCAF13P3-201ENST00000561147 1334 ntBASIC4.58□□□□□ -1.68
CTNNA3Q9UI47 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.58□□□□□ -1.68
CTNNA3Q9UI47 AL590704.1-201ENST00000402856 794 ntBASIC4.58□□□□□ -1.68
CTNNA3Q9UI47 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC4.58□□□□□ -1.68
CTNNA3Q9UI47 GOT2P5-201ENST00000433995 546 ntBASIC4.58□□□□□ -1.68
CTNNA3Q9UI47 Z74696.2-201ENST00000436514 498 ntBASIC4.58□□□□□ -1.68
CTNNA3Q9UI47 AL353093.1-201ENST00000441292 436 ntBASIC4.58□□□□□ -1.68
CTNNA3Q9UI47 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.58□□□□□ -1.68
CTNNA3Q9UI47 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC4.58□□□□□ -1.68
CTNNA3Q9UI47 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.58□□□□□ -1.68
CTNNA3Q9UI47 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.58□□□□□ -1.68
CTNNA3Q9UI47 RPL21P71-201ENST00000465598 459 ntBASIC4.58□□□□□ -1.68
CTNNA3Q9UI47 AC018635.1-201ENST00000468292 1030 ntBASIC4.58□□□□□ -1.68
CTNNA3Q9UI47 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
CTNNA3Q9UI47 RN7SL323P-201ENST00000494712 295 ntBASIC4.58□□□□□ -1.68
CTNNA3Q9UI47 MTCO3P42-201ENST00000509488 518 ntBASIC4.58□□□□□ -1.68
CTNNA3Q9UI47 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.58□□□□□ -1.68
CTNNA3Q9UI47 MTCO3P39-201ENST00000514812 518 ntBASIC4.58□□□□□ -1.68
CTNNA3Q9UI47 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.58□□□□□ -1.68
CTNNA3Q9UI47 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.58□□□□□ -1.68
CTNNA3Q9UI47 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC4.58□□□□□ -1.68
CTNNA3Q9UI47 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.58□□□□□ -1.68
CTNNA3Q9UI47 AC106785.3-201ENST00000564064 847 ntBASIC4.58□□□□□ -1.68
CTNNA3Q9UI47 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.58□□□□□ -1.68
CTNNA3Q9UI47 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC4.58□□□□□ -1.68
CTNNA3Q9UI47 SNORA51-201ENST00000606420 132 ntBASIC4.58□□□□□ -1.68
CTNNA3Q9UI47 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC4.58□□□□□ -1.68
CTNNA3Q9UI47 AL354798.1-201ENST00000622505 329 ntBASIC4.58□□□□□ -1.68
CTNNA3Q9UI47 CR392039.4-201ENST00000624968 501 ntBASIC4.58□□□□□ -1.68
CTNNA3Q9UI47 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.58□□□□□ -1.68
CTNNA3Q9UI47 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.58□□□□□ -1.68
CTNNA3Q9UI47 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CTNNA3Q9UI47 SAGE2P-201ENST00000420011 2126 ntBASIC4.58□□□□□ -1.68
CTNNA3Q9UI47 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CTNNA3Q9UI47 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.57□□□□□ -1.68
CTNNA3Q9UI47 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CTNNA3Q9UI47 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CTNNA3Q9UI47 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.57□□□□□ -1.68
CTNNA3Q9UI47 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CTNNA3Q9UI47 XIAPP3-201ENST00000312918 795 ntBASIC4.57□□□□□ -1.68
CTNNA3Q9UI47 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
CTNNA3Q9UI47 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.57□□□□□ -1.68
CTNNA3Q9UI47 U1.1-201ENST00000384101 164 ntBASIC4.57□□□□□ -1.68
CTNNA3Q9UI47 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
CTNNA3Q9UI47 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC4.57□□□□□ -1.68
CTNNA3Q9UI47 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4.57□□□□□ -1.68
CTNNA3Q9UI47 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC4.57□□□□□ -1.68
CTNNA3Q9UI47 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC4.57□□□□□ -1.68
CTNNA3Q9UI47 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC4.57□□□□□ -1.68
CTNNA3Q9UI47 IFNNP1-201ENST00000429219 553 ntBASIC4.57□□□□□ -1.68
CTNNA3Q9UI47 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.57□□□□□ -1.68
CTNNA3Q9UI47 TPMTP4-201ENST00000450749 678 ntBASIC4.57□□□□□ -1.68
CTNNA3Q9UI47 AC098824.1-201ENST00000453565 980 ntBASIC4.57□□□□□ -1.68
CTNNA3Q9UI47 RN7SL93P-201ENST00000463035 293 ntBASIC4.57□□□□□ -1.68
CTNNA3Q9UI47 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC4.57□□□□□ -1.68
CTNNA3Q9UI47 AL139099.1-201ENST00000497398 403 ntBASIC4.57□□□□□ -1.68
CTNNA3Q9UI47 IGHV3-32-201ENST00000519182 355 ntBASIC4.57□□□□□ -1.68
CTNNA3Q9UI47 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC4.57□□□□□ -1.68
CTNNA3Q9UI47 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.57□□□□□ -1.68
CTNNA3Q9UI47 CBX3P5-201ENST00000552017 521 ntBASIC4.57□□□□□ -1.68
CTNNA3Q9UI47 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC4.57□□□□□ -1.68
CTNNA3Q9UI47 ADAM3B-201ENST00000569937 840 ntBASIC4.57□□□□□ -1.68
CTNNA3Q9UI47 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.57□□□□□ -1.68
CTNNA3Q9UI47 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.57□□□□□ -1.68
CTNNA3Q9UI47 AP003117.1-201ENST00000602771 554 ntBASIC4.57□□□□□ -1.68
CTNNA3Q9UI47 AL133247.2-201ENST00000603236 482 ntBASIC4.57□□□□□ -1.68
CTNNA3Q9UI47 AL354760.1-201ENST00000608357 643 ntBASIC4.57□□□□□ -1.68
CTNNA3Q9UI47 AC069200.1-201ENST00000609511 323 ntBASIC4.57□□□□□ -1.68
CTNNA3Q9UI47 AC011472.4-201ENST00000615848 491 ntBASIC4.57□□□□□ -1.68
CTNNA3Q9UI47 U7.8-201ENST00000619968 63 ntBASIC4.57□□□□□ -1.68
CTNNA3Q9UI47 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.57□□□□□ -1.68
CTNNA3Q9UI47 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC4.57□□□□□ -1.68
CTNNA3Q9UI47 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC4.57□□□□□ -1.68
CTNNA3Q9UI47 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
CTNNA3Q9UI47 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
CTNNA3Q9UI47 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CTNNA3Q9UI47 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms