Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC4.9□□□□□ -1.63
HDAC6Q9UBN7 HMGB1P49-201ENST00000418882 569 ntBASIC4.9□□□□□ -1.63
HDAC6Q9UBN7 RPS3AP37-201ENST00000419176 745 ntBASIC4.9□□□□□ -1.63
HDAC6Q9UBN7 CBX1P4-201ENST00000439415 457 ntBASIC4.9□□□□□ -1.63
HDAC6Q9UBN7 AL354710.1-201ENST00000453641 246 ntBASIC4.9□□□□□ -1.63
HDAC6Q9UBN7 FGF7P3-201ENST00000454645 303 ntBASIC4.9□□□□□ -1.63
HDAC6Q9UBN7 BX248409.1-201ENST00000455497 255 ntBASIC4.9□□□□□ -1.63
HDAC6Q9UBN7 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC4.9□□□□□ -1.63
HDAC6Q9UBN7 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC4.9□□□□□ -1.63
HDAC6Q9UBN7 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
HDAC6Q9UBN7 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC4.9□□□□□ -1.63
HDAC6Q9UBN7 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC4.9□□□□□ -1.63
HDAC6Q9UBN7 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC4.9□□□□□ -1.63
HDAC6Q9UBN7 MTCO1P40-201ENST00000574371 625 ntBASIC4.9□□□□□ -1.63
HDAC6Q9UBN7 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC4.9□□□□□ -1.63
HDAC6Q9UBN7 AC113368.1-201ENST00000603736 382 ntBASIC4.9□□□□□ -1.63
HDAC6Q9UBN7 AC140479.6-201ENST00000633535 357 ntBASIC4.9□□□□□ -1.63
HDAC6Q9UBN7 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
HDAC6Q9UBN7 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.9□□□□□ -1.63
HDAC6Q9UBN7 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
HDAC6Q9UBN7 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
HDAC6Q9UBN7 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
HDAC6Q9UBN7 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.63
HDAC6Q9UBN7 LARP1BP1-201ENST00000506036 1359 ntBASIC4.9□□□□□ -1.63
HDAC6Q9UBN7 AC087190.4-201ENST00000574616 8334 ntBASIC4.89□□□□□ -1.63
HDAC6Q9UBN7 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
HDAC6Q9UBN7 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HDAC6Q9UBN7 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HDAC6Q9UBN7 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.89□□□□□ -1.63
HDAC6Q9UBN7 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HDAC6Q9UBN7 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.89□□□□□ -1.63
HDAC6Q9UBN7 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HDAC6Q9UBN7 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HDAC6Q9UBN7 RNU6-984P-201ENST00000363236 109 ntBASIC4.89□□□□□ -1.63
HDAC6Q9UBN7 RNU6-304P-201ENST00000364855 107 ntBASIC4.89□□□□□ -1.63
HDAC6Q9UBN7 SNORA51.12-201ENST00000384448 134 ntBASIC4.89□□□□□ -1.63
HDAC6Q9UBN7 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HDAC6Q9UBN7 RPL32P23-201ENST00000397237 405 ntBASIC4.89□□□□□ -1.63
HDAC6Q9UBN7 AL161909.1-201ENST00000397390 712 ntBASIC4.89□□□□□ -1.63
HDAC6Q9UBN7 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.89□□□□□ -1.63
HDAC6Q9UBN7 GSTM3P2-201ENST00000412746 530 ntBASIC4.89□□□□□ -1.63
HDAC6Q9UBN7 RPF2P1-201ENST00000424137 906 ntBASIC4.89□□□□□ -1.63
HDAC6Q9UBN7 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.89□□□□□ -1.63
HDAC6Q9UBN7 AL158073.1-201ENST00000426848 1104 ntBASIC4.89□□□□□ -1.63
HDAC6Q9UBN7 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.89□□□□□ -1.63
HDAC6Q9UBN7 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.89□□□□□ -1.63
HDAC6Q9UBN7 AL139824.2-201ENST00000458731 1095 ntBASIC4.89□□□□□ -1.63
HDAC6Q9UBN7 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HDAC6Q9UBN7 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HDAC6Q9UBN7 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC4.89□□□□□ -1.63
HDAC6Q9UBN7 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HDAC6Q9UBN7 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.89□□□□□ -1.63
HDAC6Q9UBN7 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC4.89□□□□□ -1.63
HDAC6Q9UBN7 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC4.89□□□□□ -1.63
HDAC6Q9UBN7 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HDAC6Q9UBN7 RNA5SP497-201ENST00000516081 97 ntBASIC4.89□□□□□ -1.63
HDAC6Q9UBN7 snoZ278.1-201ENST00000517059 112 ntBASIC4.89□□□□□ -1.63
HDAC6Q9UBN7 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.89□□□□□ -1.63
HDAC6Q9UBN7 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC4.89□□□□□ -1.63
HDAC6Q9UBN7 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HDAC6Q9UBN7 AC091178.1-203ENST00000584586 279 ntBASIC4.89□□□□□ -1.63
HDAC6Q9UBN7 AC093227.2-201ENST00000589357 285 ntBASIC4.89□□□□□ -1.63
HDAC6Q9UBN7 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC4.89□□□□□ -1.63
HDAC6Q9UBN7 AC008966.2-201ENST00000606157 453 ntBASIC4.89□□□□□ -1.63
HDAC6Q9UBN7 AL121895.2-201ENST00000619558 447 ntBASIC4.89□□□□□ -1.63
HDAC6Q9UBN7 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4.89□□□□□ -1.63
HDAC6Q9UBN7 AC097655.1-201ENST00000635075 318 ntBASIC4.89□□□□□ -1.63
HDAC6Q9UBN7 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HDAC6Q9UBN7 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HDAC6Q9UBN7 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HDAC6Q9UBN7 AC139769.1-204ENST00000472297 1931 ntBASIC4.89□□□□□ -1.63
HDAC6Q9UBN7 AC022031.1-201ENST00000585985 2593 ntBASIC4.89□□□□□ -1.63
HDAC6Q9UBN7 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.89□□□□□ -1.63
HDAC6Q9UBN7 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
HDAC6Q9UBN7 AC015813.6-201ENST00000624409 5808 ntBASIC4.88□□□□□ -1.63
HDAC6Q9UBN7 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HDAC6Q9UBN7 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.88□□□□□ -1.63
HDAC6Q9UBN7 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
HDAC6Q9UBN7 AC006971.1-201ENST00000407916 4486 ntBASIC4.88□□□□□ -1.63
HDAC6Q9UBN7 RN7SKP280-201ENST00000364196 304 ntBASIC4.88□□□□□ -1.63
HDAC6Q9UBN7 RNU4-28P-201ENST00000364739 141 ntBASIC4.88□□□□□ -1.63
HDAC6Q9UBN7 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
HDAC6Q9UBN7 MIR1303-201ENST00000408625 86 ntBASIC4.88□□□□□ -1.63
HDAC6Q9UBN7 RNU6-77P-201ENST00000410554 91 ntBASIC4.88□□□□□ -1.63
HDAC6Q9UBN7 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HDAC6Q9UBN7 RPL22P18-201ENST00000417197 377 ntBASIC4.88□□□□□ -1.63
HDAC6Q9UBN7 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.88□□□□□ -1.63
HDAC6Q9UBN7 OR2X1P-201ENST00000421144 687 ntBASIC4.88□□□□□ -1.63
HDAC6Q9UBN7 AL513175.2-201ENST00000422071 443 ntBASIC4.88□□□□□ -1.63
HDAC6Q9UBN7 EEF1A1P39-201ENST00000440791 250 ntBASIC4.88□□□□□ -1.63
HDAC6Q9UBN7 AL591719.1-201ENST00000444669 744 ntBASIC4.88□□□□□ -1.63
HDAC6Q9UBN7 EEF1A1P1-201ENST00000447052 739 ntBASIC4.88□□□□□ -1.63
HDAC6Q9UBN7 AC005002.1-201ENST00000447458 540 ntBASIC4.88□□□□□ -1.63
HDAC6Q9UBN7 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC4.88□□□□□ -1.63
HDAC6Q9UBN7 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.88□□□□□ -1.63
HDAC6Q9UBN7 CCDC75P1-201ENST00000469247 791 ntBASIC4.88□□□□□ -1.63
HDAC6Q9UBN7 AC012158.1-204ENST00000483430 465 ntBASIC4.88□□□□□ -1.63
HDAC6Q9UBN7 AC108022.1-201ENST00000493466 478 ntBASIC4.88□□□□□ -1.63
HDAC6Q9UBN7 RN7SL691P-201ENST00000494487 301 ntBASIC4.88□□□□□ -1.63
HDAC6Q9UBN7 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms