Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
CCDC88CQ9P219 AL049781.1-201ENST00000623195 3585 ntBASIC3.33□□□□□ -1.88
CCDC88CQ9P219 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
CCDC88CQ9P219 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.33□□□□□ -1.88
CCDC88CQ9P219 MTND4P22-201ENST00000413116 1169 ntBASIC3.33□□□□□ -1.88
CCDC88CQ9P219 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.33□□□□□ -1.88
CCDC88CQ9P219 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.33□□□□□ -1.88
CCDC88CQ9P219 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.33□□□□□ -1.88
CCDC88CQ9P219 RANP9-201ENST00000519957 271 ntBASIC3.33□□□□□ -1.88
CCDC88CQ9P219 AC069209.1-201ENST00000619282 651 ntBASIC3.33□□□□□ -1.88
CCDC88CQ9P219 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.33□□□□□ -1.88
CCDC88CQ9P219 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.33□□□□□ -1.88
CCDC88CQ9P219 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.33□□□□□ -1.88
CCDC88CQ9P219 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CCDC88CQ9P219 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
CCDC88CQ9P219 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CCDC88CQ9P219 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CCDC88CQ9P219 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CCDC88CQ9P219 AP002088.1-201ENST00000382740 395 ntBASIC3.32□□□□□ -1.88
CCDC88CQ9P219 AL034403.1-201ENST00000399414 885 ntBASIC3.32□□□□□ -1.88
CCDC88CQ9P219 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC3.32□□□□□ -1.88
CCDC88CQ9P219 ARL2BPP6-201ENST00000512757 439 ntBASIC3.32□□□□□ -1.88
CCDC88CQ9P219 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.32□□□□□ -1.88
CCDC88CQ9P219 PDCD5P1-201ENST00000543528 309 ntBASIC3.32□□□□□ -1.88
CCDC88CQ9P219 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.32□□□□□ -1.88
CCDC88CQ9P219 AC012493.2-201ENST00000595083 291 ntBASIC3.32□□□□□ -1.88
CCDC88CQ9P219 BNIP3P38-201ENST00000601117 544 ntBASIC3.32□□□□□ -1.88
CCDC88CQ9P219 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.32□□□□□ -1.88
CCDC88CQ9P219 AC010591.1-201ENST00000603941 649 ntBASIC3.32□□□□□ -1.88
CCDC88CQ9P219 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CCDC88CQ9P219 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CCDC88CQ9P219 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
CCDC88CQ9P219 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CCDC88CQ9P219 SPATA2P1-201ENST00000431223 2055 ntBASIC3.32□□□□□ -1.88
CCDC88CQ9P219 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.32□□□□□ -1.88
CCDC88CQ9P219 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CCDC88CQ9P219 MIR137-201ENST00000385223 102 ntBASIC3.32□□□□□ -1.88
CCDC88CQ9P219 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.32□□□□□ -1.88
CCDC88CQ9P219 AMD1P2-201ENST00000412936 992 ntBASIC3.32□□□□□ -1.88
CCDC88CQ9P219 CRYBB2P1-203ENST00000415709 538 ntBASIC3.32□□□□□ -1.88
CCDC88CQ9P219 NPM1P48-201ENST00000436002 853 ntBASIC3.32□□□□□ -1.88
CCDC88CQ9P219 PRDX3P3-201ENST00000447765 522 ntBASIC3.32□□□□□ -1.88
CCDC88CQ9P219 AL162388.1-201ENST00000450912 352 ntBASIC3.32□□□□□ -1.88
CCDC88CQ9P219 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CCDC88CQ9P219 RNU6-579P-201ENST00000516879 102 ntBASIC3.32□□□□□ -1.88
CCDC88CQ9P219 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.32□□□□□ -1.88
CCDC88CQ9P219 CYP2C60P-201ENST00000566088 139 ntBASIC3.32□□□□□ -1.88
CCDC88CQ9P219 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC3.32□□□□□ -1.88
CCDC88CQ9P219 AC067852.3-201ENST00000589177 561 ntBASIC3.32□□□□□ -1.88
CCDC88CQ9P219 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.32□□□□□ -1.88
CCDC88CQ9P219 AL139286.1-201ENST00000604465 483 ntBASIC3.32□□□□□ -1.88
CCDC88CQ9P219 AC010809.3-201ENST00000621310 641 ntBASIC3.32□□□□□ -1.88
CCDC88CQ9P219 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.32□□□□□ -1.88
CCDC88CQ9P219 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.32□□□□□ -1.88
CCDC88CQ9P219 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
CCDC88CQ9P219 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CCDC88CQ9P219 Z73965.1-201ENST00000623412 2297 ntBASIC3.32□□□□□ -1.88
CCDC88CQ9P219 AC009229.4-201ENST00000623854 1947 ntBASIC3.32□□□□□ -1.88
CCDC88CQ9P219 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.31□□□□□ -1.88
CCDC88CQ9P219 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
CCDC88CQ9P219 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
CCDC88CQ9P219 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CCDC88CQ9P219 DPY19L1P2-201ENST00000426647 915 ntBASIC3.31□□□□□ -1.88
CCDC88CQ9P219 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.31□□□□□ -1.88
CCDC88CQ9P219 SETD6P1-201ENST00000444575 317 ntBASIC3.31□□□□□ -1.88
CCDC88CQ9P219 AC099563.1-201ENST00000456086 418 ntBASIC3.31□□□□□ -1.88
CCDC88CQ9P219 AC109925.1-201ENST00000478069 331 ntBASIC3.31□□□□□ -1.88
CCDC88CQ9P219 PCBP2P3-201ENST00000509726 843 ntBASIC3.31□□□□□ -1.88
CCDC88CQ9P219 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC3.31□□□□□ -1.88
CCDC88CQ9P219 KCTD9P6-201ENST00000522306 950 ntBASIC3.31□□□□□ -1.88
CCDC88CQ9P219 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CCDC88CQ9P219 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC88CQ9P219 AC106785.3-201ENST00000564064 847 ntBASIC3.31□□□□□ -1.88
CCDC88CQ9P219 MIR4425-201ENST00000580572 84 ntBASIC3.31□□□□□ -1.88
CCDC88CQ9P219 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC3.31□□□□□ -1.88
CCDC88CQ9P219 AC125494.3-201ENST00000602759 455 ntBASIC3.31□□□□□ -1.88
CCDC88CQ9P219 AL160281.1-201ENST00000605307 311 ntBASIC3.31□□□□□ -1.88
CCDC88CQ9P219 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.31□□□□□ -1.88
CCDC88CQ9P219 MIR6715B-201ENST00000637172 77 ntBASIC3.31□□□□□ -1.88
CCDC88CQ9P219 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.31□□□□□ -1.88
CCDC88CQ9P219 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC88CQ9P219 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CCDC88CQ9P219 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CCDC88CQ9P219 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC88CQ9P219 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.31□□□□□ -1.88
CCDC88CQ9P219 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC3.31□□□□□ -1.88
CCDC88CQ9P219 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC88CQ9P219 RNA5SP31-201ENST00000411144 127 ntBASIC3.31□□□□□ -1.88
CCDC88CQ9P219 AC096664.2-201ENST00000411843 406 ntBASIC3.31□□□□□ -1.88
CCDC88CQ9P219 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.31□□□□□ -1.88
CCDC88CQ9P219 SDCBPP2-201ENST00000424643 885 ntBASIC3.31□□□□□ -1.88
CCDC88CQ9P219 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CCDC88CQ9P219 MTHFD2P4-201ENST00000515074 1025 ntBASIC3.31□□□□□ -1.88
CCDC88CQ9P219 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC88CQ9P219 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC88CQ9P219 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC88CQ9P219 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC88CQ9P219 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC88CQ9P219 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.31□□□□□ -1.88
CCDC88CQ9P219 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms