Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 RPS4XP2-201ENST00000458402 793 ntBASIC3.65□□□□□ -1.83
CISHQ9NSE2 RN7SL293P-201ENST00000481765 281 ntBASIC3.65□□□□□ -1.83
CISHQ9NSE2 RPL21P129-201ENST00000491732 478 ntBASIC3.65□□□□□ -1.83
CISHQ9NSE2 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CISHQ9NSE2 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CISHQ9NSE2 VWA8P1-201ENST00000510889 176 ntBASIC3.65□□□□□ -1.83
CISHQ9NSE2 AC021146.1-201ENST00000511202 716 ntBASIC3.65□□□□□ -1.83
CISHQ9NSE2 SOD1P3-201ENST00000518682 454 ntBASIC3.65□□□□□ -1.83
CISHQ9NSE2 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CISHQ9NSE2 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.65□□□□□ -1.83
CISHQ9NSE2 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.65□□□□□ -1.83
CISHQ9NSE2 MIR4444-1-201ENST00000581696 74 ntBASIC3.65□□□□□ -1.83
CISHQ9NSE2 MIR4444-2-201ENST00000584390 74 ntBASIC3.65□□□□□ -1.83
CISHQ9NSE2 AC006557.5-201ENST00000603126 811 ntBASIC3.65□□□□□ -1.83
CISHQ9NSE2 ELOCP34-201ENST00000604436 327 ntBASIC3.65□□□□□ -1.83
CISHQ9NSE2 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.65□□□□□ -1.83
CISHQ9NSE2 AL356274.1-201ENST00000617064 410 ntBASIC3.65□□□□□ -1.83
CISHQ9NSE2 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
CISHQ9NSE2 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC3.65□□□□□ -1.83
CISHQ9NSE2 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.65□□□□□ -1.83
CISHQ9NSE2 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
CISHQ9NSE2 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.65□□□□□ -1.83
CISHQ9NSE2 DDX6P1-205ENST00000441966 1436 ntBASIC3.64□□□□□ -1.83
CISHQ9NSE2 AL356274.2-201ENST00000624379 3752 ntBASIC3.64□□□□□ -1.83
CISHQ9NSE2 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.64□□□□□ -1.83
CISHQ9NSE2 RNA5SP119-201ENST00000362715 117 ntBASIC3.64□□□□□ -1.83
CISHQ9NSE2 RNA5SP197-201ENST00000363357 119 ntBASIC3.64□□□□□ -1.83
CISHQ9NSE2 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CISHQ9NSE2 SNORA48.7-201ENST00000391302 135 ntBASIC3.64□□□□□ -1.83
CISHQ9NSE2 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.64□□□□□ -1.83
CISHQ9NSE2 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC3.64□□□□□ -1.83
CISHQ9NSE2 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC3.64□□□□□ -1.83
CISHQ9NSE2 CLIC4P1-201ENST00000453177 535 ntBASIC3.64□□□□□ -1.83
CISHQ9NSE2 ALDH7A1P3-201ENST00000492517 345 ntBASIC3.64□□□□□ -1.83
CISHQ9NSE2 AC020893.1-201ENST00000502452 580 ntBASIC3.64□□□□□ -1.83
CISHQ9NSE2 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.64□□□□□ -1.83
CISHQ9NSE2 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC3.64□□□□□ -1.83
CISHQ9NSE2 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC3.64□□□□□ -1.83
CISHQ9NSE2 AC135001.1-201ENST00000544546 283 ntBASIC3.64□□□□□ -1.83
CISHQ9NSE2 CCNG2P1-201ENST00000549521 1000 ntBASIC3.64□□□□□ -1.83
CISHQ9NSE2 TGIF1P1-201ENST00000558095 802 ntBASIC3.64□□□□□ -1.83
CISHQ9NSE2 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC3.64□□□□□ -1.83
CISHQ9NSE2 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC3.64□□□□□ -1.83
CISHQ9NSE2 FAM106CP-201ENST00000582212 507 ntBASIC3.64□□□□□ -1.83
CISHQ9NSE2 AL713998.2-201ENST00000604538 1198 ntBASIC3.64□□□□□ -1.83
CISHQ9NSE2 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.64□□□□□ -1.83
CISHQ9NSE2 AC015802.5-201ENST00000607478 399 ntBASIC3.64□□□□□ -1.83
CISHQ9NSE2 AL391261.4-201ENST00000616012 481 ntBASIC3.64□□□□□ -1.83
CISHQ9NSE2 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC3.64□□□□□ -1.83
CISHQ9NSE2 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CISHQ9NSE2 AC127502.3-201ENST00000636170 1206 ntBASIC3.64□□□□□ -1.83
CISHQ9NSE2 OR8B1P-202ENST00000641132 1178 ntBASIC3.64□□□□□ -1.83
CISHQ9NSE2 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CISHQ9NSE2 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.64□□□□□ -1.83
CISHQ9NSE2 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CISHQ9NSE2 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CISHQ9NSE2 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
CISHQ9NSE2 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
CISHQ9NSE2 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
CISHQ9NSE2 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.63□□□□□ -1.83
CISHQ9NSE2 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CISHQ9NSE2 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CISHQ9NSE2 RNA5SP50-201ENST00000363731 107 ntBASIC3.63□□□□□ -1.83
CISHQ9NSE2 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.63□□□□□ -1.83
CISHQ9NSE2 RNU6-603P-201ENST00000411403 107 ntBASIC3.63□□□□□ -1.83
CISHQ9NSE2 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC3.63□□□□□ -1.83
CISHQ9NSE2 RAC1P3-201ENST00000416129 580 ntBASIC3.63□□□□□ -1.83
CISHQ9NSE2 AC127526.1-201ENST00000417526 366 ntBASIC3.63□□□□□ -1.83
CISHQ9NSE2 VN1R34P-201ENST00000447387 883 ntBASIC3.63□□□□□ -1.83
CISHQ9NSE2 RPL12P26-201ENST00000452430 487 ntBASIC3.63□□□□□ -1.83
CISHQ9NSE2 AC097262.1-201ENST00000452559 548 ntBASIC3.63□□□□□ -1.83
CISHQ9NSE2 RPL23AP67-201ENST00000465341 474 ntBASIC3.63□□□□□ -1.83
CISHQ9NSE2 FCF1P8-201ENST00000510322 597 ntBASIC3.63□□□□□ -1.83
CISHQ9NSE2 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.63□□□□□ -1.83
CISHQ9NSE2 OR4R3P-201ENST00000525084 838 ntBASIC3.63□□□□□ -1.83
CISHQ9NSE2 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.63□□□□□ -1.83
CISHQ9NSE2 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.63□□□□□ -1.83
CISHQ9NSE2 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.63□□□□□ -1.83
CISHQ9NSE2 MTND2P13-201ENST00000577438 1039 ntBASIC3.63□□□□□ -1.83
CISHQ9NSE2 MIR5186-201ENST00000577504 120 ntBASIC3.63□□□□□ -1.83
CISHQ9NSE2 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.63□□□□□ -1.83
CISHQ9NSE2 RNVU1-4-201ENST00000612985 164 ntBASIC3.63□□□□□ -1.83
CISHQ9NSE2 AC110801.1-201ENST00000623590 212 ntBASIC3.63□□□□□ -1.83
CISHQ9NSE2 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CISHQ9NSE2 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CISHQ9NSE2 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CISHQ9NSE2 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
CISHQ9NSE2 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
CISHQ9NSE2 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CISHQ9NSE2 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CISHQ9NSE2 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.62□□□□□ -1.83
CISHQ9NSE2 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CISHQ9NSE2 AL592437.2-201ENST00000421655 2434 ntBASIC3.62□□□□□ -1.83
CISHQ9NSE2 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.62□□□□□ -1.83
CISHQ9NSE2 AC114546.3-201ENST00000623582 1734 ntBASIC3.62□□□□□ -1.83
CISHQ9NSE2 MIR423-201ENST00000362201 94 ntBASIC3.62□□□□□ -1.83
CISHQ9NSE2 SNORA71.3-201ENST00000362582 128 ntBASIC3.62□□□□□ -1.83
CISHQ9NSE2 RHEBP3-201ENST00000411920 351 ntBASIC3.62□□□□□ -1.83
CISHQ9NSE2 HSFY4P-201ENST00000415994 1181 ntBASIC3.62□□□□□ -1.83
CISHQ9NSE2 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms