Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC4.84□□□□□ -1.63
USP29Q9HBJ7 RPS27P23-201ENST00000487608 251 ntBASIC4.84□□□□□ -1.63
USP29Q9HBJ7 IGLV2-34-201ENST00000490007 283 ntBASIC4.84□□□□□ -1.63
USP29Q9HBJ7 AC005912.1-201ENST00000495392 255 ntBASIC4.84□□□□□ -1.63
USP29Q9HBJ7 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
USP29Q9HBJ7 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC4.84□□□□□ -1.63
USP29Q9HBJ7 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC4.84□□□□□ -1.63
USP29Q9HBJ7 IGBP1P5-201ENST00000507524 1000 ntBASIC4.84□□□□□ -1.63
USP29Q9HBJ7 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.84□□□□□ -1.63
USP29Q9HBJ7 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC4.84□□□□□ -1.63
USP29Q9HBJ7 Y_RNA.655-201ENST00000515919 96 ntBASIC4.84□□□□□ -1.63
USP29Q9HBJ7 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC4.84□□□□□ -1.63
USP29Q9HBJ7 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC4.84□□□□□ -1.63
USP29Q9HBJ7 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC4.84□□□□□ -1.63
USP29Q9HBJ7 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
USP29Q9HBJ7 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC4.84□□□□□ -1.63
USP29Q9HBJ7 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC4.84□□□□□ -1.63
USP29Q9HBJ7 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.84□□□□□ -1.63
USP29Q9HBJ7 AC079171.1-201ENST00000568788 914 ntBASIC4.84□□□□□ -1.63
USP29Q9HBJ7 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC4.84□□□□□ -1.63
USP29Q9HBJ7 AC090312.2-201ENST00000582687 378 ntBASIC4.84□□□□□ -1.63
USP29Q9HBJ7 MIR5096-201ENST00000583713 70 ntBASIC4.84□□□□□ -1.63
USP29Q9HBJ7 AL137072.1-201ENST00000603444 466 ntBASIC4.84□□□□□ -1.63
USP29Q9HBJ7 AC010738.1-201ENST00000604970 987 ntBASIC4.84□□□□□ -1.63
USP29Q9HBJ7 FAM27B-201ENST00000610601 213 ntBASIC4.84□□□□□ -1.63
USP29Q9HBJ7 AC122133.1-201ENST00000613964 233 ntBASIC4.84□□□□□ -1.63
USP29Q9HBJ7 AC015726.3-201ENST00000624501 418 ntBASIC4.84□□□□□ -1.63
USP29Q9HBJ7 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC4.84□□□□□ -1.63
USP29Q9HBJ7 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
USP29Q9HBJ7 AC010300.1-201ENST00000600671 5134 ntBASIC4.84□□□□□ -1.63
USP29Q9HBJ7 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
USP29Q9HBJ7 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.64
USP29Q9HBJ7 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.84□□□□□ -1.64
USP29Q9HBJ7 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.64
USP29Q9HBJ7 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
USP29Q9HBJ7 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
USP29Q9HBJ7 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
USP29Q9HBJ7 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
USP29Q9HBJ7 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
USP29Q9HBJ7 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
USP29Q9HBJ7 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.83□□□□□ -1.64
USP29Q9HBJ7 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.83□□□□□ -1.64
USP29Q9HBJ7 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.83□□□□□ -1.64
USP29Q9HBJ7 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
USP29Q9HBJ7 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.83□□□□□ -1.64
USP29Q9HBJ7 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
USP29Q9HBJ7 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
USP29Q9HBJ7 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.83□□□□□ -1.64
USP29Q9HBJ7 Y_RNA.436-201ENST00000384097 102 ntBASIC4.83□□□□□ -1.64
USP29Q9HBJ7 SNORD96B-201ENST00000386148 79 ntBASIC4.83□□□□□ -1.64
USP29Q9HBJ7 GSTA8P-201ENST00000404253 637 ntBASIC4.83□□□□□ -1.64
USP29Q9HBJ7 RNA5SP146-201ENST00000410743 123 ntBASIC4.83□□□□□ -1.64
USP29Q9HBJ7 AC009302.1-201ENST00000417147 390 ntBASIC4.83□□□□□ -1.64
USP29Q9HBJ7 COX6CP17-201ENST00000421389 185 ntBASIC4.83□□□□□ -1.64
USP29Q9HBJ7 DPRXP1-201ENST00000426312 460 ntBASIC4.83□□□□□ -1.64
USP29Q9HBJ7 NRBF2P3-201ENST00000432731 865 ntBASIC4.83□□□□□ -1.64
USP29Q9HBJ7 MTCO3P5-201ENST00000433620 714 ntBASIC4.83□□□□□ -1.64
USP29Q9HBJ7 SEPT7P5-201ENST00000434048 306 ntBASIC4.83□□□□□ -1.64
USP29Q9HBJ7 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.83□□□□□ -1.64
USP29Q9HBJ7 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC4.83□□□□□ -1.64
USP29Q9HBJ7 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.83□□□□□ -1.64
USP29Q9HBJ7 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.83□□□□□ -1.64
USP29Q9HBJ7 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.83□□□□□ -1.64
USP29Q9HBJ7 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.83□□□□□ -1.64
USP29Q9HBJ7 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
USP29Q9HBJ7 HSPE1P23-201ENST00000509838 286 ntBASIC4.83□□□□□ -1.64
USP29Q9HBJ7 AC010587.2-201ENST00000511727 448 ntBASIC4.83□□□□□ -1.64
USP29Q9HBJ7 RNU1-6P-201ENST00000516290 144 ntBASIC4.83□□□□□ -1.64
USP29Q9HBJ7 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC4.83□□□□□ -1.64
USP29Q9HBJ7 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC4.83□□□□□ -1.64
USP29Q9HBJ7 NAP1L1P1-201ENST00000524793 1063 ntBASIC4.83□□□□□ -1.64
USP29Q9HBJ7 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
USP29Q9HBJ7 AC022882.1-201ENST00000532142 501 ntBASIC4.83□□□□□ -1.64
USP29Q9HBJ7 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.83□□□□□ -1.64
USP29Q9HBJ7 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.83□□□□□ -1.64
USP29Q9HBJ7 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.83□□□□□ -1.64
USP29Q9HBJ7 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.83□□□□□ -1.64
USP29Q9HBJ7 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.83□□□□□ -1.64
USP29Q9HBJ7 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.83□□□□□ -1.64
USP29Q9HBJ7 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.83□□□□□ -1.64
USP29Q9HBJ7 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC4.83□□□□□ -1.64
USP29Q9HBJ7 MTCYBP28-201ENST00000566728 1132 ntBASIC4.83□□□□□ -1.64
USP29Q9HBJ7 AC090751.1-201ENST00000566966 267 ntBASIC4.83□□□□□ -1.64
USP29Q9HBJ7 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.83□□□□□ -1.64
USP29Q9HBJ7 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.83□□□□□ -1.64
USP29Q9HBJ7 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.83□□□□□ -1.64
USP29Q9HBJ7 VN1R82P-201ENST00000601481 356 ntBASIC4.83□□□□□ -1.64
USP29Q9HBJ7 AC068790.2-201ENST00000602601 557 ntBASIC4.83□□□□□ -1.64
USP29Q9HBJ7 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC4.83□□□□□ -1.64
USP29Q9HBJ7 NTAN1P1-201ENST00000603150 646 ntBASIC4.83□□□□□ -1.64
USP29Q9HBJ7 AC135507.1-201ENST00000607214 561 ntBASIC4.83□□□□□ -1.64
USP29Q9HBJ7 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.83□□□□□ -1.64
USP29Q9HBJ7 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
USP29Q9HBJ7 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.83□□□□□ -1.64
USP29Q9HBJ7 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
USP29Q9HBJ7 AC022893.2-201ENST00000564832 3296 ntBASIC4.83□□□□□ -1.64
USP29Q9HBJ7 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
USP29Q9HBJ7 ASNSP1-204ENST00000641977 1664 ntBASIC4.83□□□□□ -1.64
USP29Q9HBJ7 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.83□□□□□ -1.64
USP29Q9HBJ7 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms