Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
UPF3BQ9BZI7 AL049555.1-201ENST00000562834 1933 ntBASIC4.36□□□□□ -1.71
UPF3BQ9BZI7 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
UPF3BQ9BZI7 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC4.36□□□□□ -1.71
UPF3BQ9BZI7 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.36□□□□□ -1.71
UPF3BQ9BZI7 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.36□□□□□ -1.71
UPF3BQ9BZI7 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
UPF3BQ9BZI7 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
UPF3BQ9BZI7 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.36□□□□□ -1.71
UPF3BQ9BZI7 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.36□□□□□ -1.71
UPF3BQ9BZI7 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC4.36□□□□□ -1.71
UPF3BQ9BZI7 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC4.36□□□□□ -1.71
UPF3BQ9BZI7 SETD6P1-201ENST00000444575 317 ntBASIC4.36□□□□□ -1.71
UPF3BQ9BZI7 NANOGP10-201ENST00000453325 895 ntBASIC4.36□□□□□ -1.71
UPF3BQ9BZI7 AC114982.2-201ENST00000461396 358 ntBASIC4.36□□□□□ -1.71
UPF3BQ9BZI7 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.36□□□□□ -1.71
UPF3BQ9BZI7 RNU1-95P-201ENST00000516357 160 ntBASIC4.36□□□□□ -1.71
UPF3BQ9BZI7 RNU1-128P-201ENST00000516704 160 ntBASIC4.36□□□□□ -1.71
UPF3BQ9BZI7 AC009101.1-201ENST00000568135 242 ntBASIC4.36□□□□□ -1.71
UPF3BQ9BZI7 VN1R79P-201ENST00000593540 513 ntBASIC4.36□□□□□ -1.71
UPF3BQ9BZI7 AC244505.7-201ENST00000599675 272 ntBASIC4.36□□□□□ -1.71
UPF3BQ9BZI7 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.36□□□□□ -1.71
UPF3BQ9BZI7 RNU1-30P-201ENST00000606575 163 ntBASIC4.36□□□□□ -1.71
UPF3BQ9BZI7 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC4.36□□□□□ -1.71
UPF3BQ9BZI7 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
UPF3BQ9BZI7 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.36□□□□□ -1.71
UPF3BQ9BZI7 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
UPF3BQ9BZI7 SCARNA15.3-201ENST00000626315 122 ntBASIC4.36□□□□□ -1.71
UPF3BQ9BZI7 SCARNA4.1-201ENST00000628597 123 ntBASIC4.36□□□□□ -1.71
UPF3BQ9BZI7 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC4.36□□□□□ -1.71
UPF3BQ9BZI7 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
UPF3BQ9BZI7 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.36□□□□□ -1.71
UPF3BQ9BZI7 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
UPF3BQ9BZI7 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
UPF3BQ9BZI7 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.36□□□□□ -1.71
UPF3BQ9BZI7 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
UPF3BQ9BZI7 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
UPF3BQ9BZI7 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
UPF3BQ9BZI7 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
UPF3BQ9BZI7 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
UPF3BQ9BZI7 OR4A15-201ENST00000314706 1035 ntBASIC4.35□□□□□ -1.71
UPF3BQ9BZI7 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.35□□□□□ -1.71
UPF3BQ9BZI7 RN7SKP156-201ENST00000410308 342 ntBASIC4.35□□□□□ -1.71
UPF3BQ9BZI7 MTND2P15-201ENST00000418575 892 ntBASIC4.35□□□□□ -1.71
UPF3BQ9BZI7 AC022022.1-201ENST00000430304 178 ntBASIC4.35□□□□□ -1.71
UPF3BQ9BZI7 AC074367.1-201ENST00000438685 1125 ntBASIC4.35□□□□□ -1.71
UPF3BQ9BZI7 RPS29P31-201ENST00000446147 164 ntBASIC4.35□□□□□ -1.71
UPF3BQ9BZI7 PRDX3P3-201ENST00000447765 522 ntBASIC4.35□□□□□ -1.71
UPF3BQ9BZI7 AC005229.2-201ENST00000456995 399 ntBASIC4.35□□□□□ -1.71
UPF3BQ9BZI7 RPS3AP50-201ENST00000487064 803 ntBASIC4.35□□□□□ -1.71
UPF3BQ9BZI7 HAUS1P1-201ENST00000505275 832 ntBASIC4.35□□□□□ -1.71
UPF3BQ9BZI7 AC074250.1-201ENST00000511117 192 ntBASIC4.35□□□□□ -1.71
UPF3BQ9BZI7 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC4.35□□□□□ -1.71
UPF3BQ9BZI7 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC4.35□□□□□ -1.71
UPF3BQ9BZI7 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.35□□□□□ -1.71
UPF3BQ9BZI7 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC4.35□□□□□ -1.71
UPF3BQ9BZI7 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC4.35□□□□□ -1.71
UPF3BQ9BZI7 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC4.35□□□□□ -1.71
UPF3BQ9BZI7 MIR4513-201ENST00000581077 86 ntBASIC4.35□□□□□ -1.71
UPF3BQ9BZI7 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
UPF3BQ9BZI7 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
UPF3BQ9BZI7 ZNF285B-201ENST00000561698 1767 ntBASIC4.35□□□□□ -1.71
UPF3BQ9BZI7 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
UPF3BQ9BZI7 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC4.34□□□□□ -1.71
UPF3BQ9BZI7 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.34□□□□□ -1.71
UPF3BQ9BZI7 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
UPF3BQ9BZI7 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.34□□□□□ -1.71
UPF3BQ9BZI7 AL138878.1-201ENST00000405131 347 ntBASIC4.34□□□□□ -1.71
UPF3BQ9BZI7 AC068533.1-201ENST00000418542 415 ntBASIC4.34□□□□□ -1.71
UPF3BQ9BZI7 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.34□□□□□ -1.71
UPF3BQ9BZI7 AC093084.1-201ENST00000424233 687 ntBASIC4.34□□□□□ -1.71
UPF3BQ9BZI7 ELOCP10-201ENST00000440624 327 ntBASIC4.34□□□□□ -1.71
UPF3BQ9BZI7 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC4.34□□□□□ -1.71
UPF3BQ9BZI7 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.34□□□□□ -1.71
UPF3BQ9BZI7 AC099563.1-201ENST00000456086 418 ntBASIC4.34□□□□□ -1.71
UPF3BQ9BZI7 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC4.34□□□□□ -1.71
UPF3BQ9BZI7 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.34□□□□□ -1.71
UPF3BQ9BZI7 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.34□□□□□ -1.71
UPF3BQ9BZI7 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.34□□□□□ -1.71
UPF3BQ9BZI7 AL121766.1-201ENST00000547436 487 ntBASIC4.34□□□□□ -1.71
UPF3BQ9BZI7 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.34□□□□□ -1.71
UPF3BQ9BZI7 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.34□□□□□ -1.71
UPF3BQ9BZI7 MIR4738-201ENST00000579134 87 ntBASIC4.34□□□□□ -1.71
UPF3BQ9BZI7 ELOCP34-201ENST00000604436 327 ntBASIC4.34□□□□□ -1.71
UPF3BQ9BZI7 AL391497.1-201ENST00000608671 547 ntBASIC4.34□□□□□ -1.71
UPF3BQ9BZI7 AC005344.1-201ENST00000613391 459 ntBASIC4.34□□□□□ -1.71
UPF3BQ9BZI7 AL442067.2-201ENST00000614033 363 ntBASIC4.34□□□□□ -1.71
UPF3BQ9BZI7 AL356274.1-201ENST00000617064 410 ntBASIC4.34□□□□□ -1.71
UPF3BQ9BZI7 PCNP-208ENST00000627393 136 ntTSL 2 BASIC4.34□□□□□ -1.71
UPF3BQ9BZI7 AP000553.6-201ENST00000641242 118 ntBASIC4.34□□□□□ -1.71
UPF3BQ9BZI7 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
UPF3BQ9BZI7 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
UPF3BQ9BZI7 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.34□□□□□ -1.71
UPF3BQ9BZI7 AC009313.2-201ENST00000417893 1941 ntBASIC4.34□□□□□ -1.71
UPF3BQ9BZI7 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
UPF3BQ9BZI7 AP004289.2-201ENST00000444413 1457 ntBASIC4.33□□□□□ -1.72
UPF3BQ9BZI7 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
UPF3BQ9BZI7 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
UPF3BQ9BZI7 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
UPF3BQ9BZI7 RNA5SP42-201ENST00000364278 115 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms