Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC5.59□□□□□ -1.52
IFT140Q96RY7 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
IFT140Q96RY7 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.52
IFT140Q96RY7 AL121890.1-201ENST00000435457 205 ntBASIC5.58□□□□□ -1.52
IFT140Q96RY7 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC5.58□□□□□ -1.52
IFT140Q96RY7 AC026801.2-201ENST00000515352 425 ntBASIC5.58□□□□□ -1.52
IFT140Q96RY7 NDUFB9P3-201ENST00000521269 501 ntBASIC5.58□□□□□ -1.52
IFT140Q96RY7 HIGD1AP1-201ENST00000550979 275 ntBASIC5.58□□□□□ -1.52
IFT140Q96RY7 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC5.58□□□□□ -1.52
IFT140Q96RY7 KLKP1-201ENST00000595979 403 ntBASIC5.58□□□□□ -1.52
IFT140Q96RY7 AP003485.2-201ENST00000623636 610 ntBASIC5.58□□□□□ -1.52
IFT140Q96RY7 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
IFT140Q96RY7 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
IFT140Q96RY7 ZNF826P-207ENST00000622273 1910 ntBASIC5.58□□□□□ -1.52
IFT140Q96RY7 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
IFT140Q96RY7 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
IFT140Q96RY7 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC5.58□□□□□ -1.52
IFT140Q96RY7 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
IFT140Q96RY7 SNORA7.4-201ENST00000384249 137 ntBASIC5.58□□□□□ -1.52
IFT140Q96RY7 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC5.58□□□□□ -1.52
IFT140Q96RY7 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC5.58□□□□□ -1.52
IFT140Q96RY7 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC5.58□□□□□ -1.52
IFT140Q96RY7 AC006272.2-201ENST00000594725 163 ntBASIC5.58□□□□□ -1.52
IFT140Q96RY7 AC012603.1-201ENST00000606424 528 ntBASIC5.58□□□□□ -1.52
IFT140Q96RY7 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC5.58□□□□□ -1.52
IFT140Q96RY7 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC5.57□□□□□ -1.52
IFT140Q96RY7 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC5.57□□□□□ -1.52
IFT140Q96RY7 AC011266.1-201ENST00000624119 3569 ntBASIC5.57□□□□□ -1.52
IFT140Q96RY7 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC5.57□□□□□ -1.52
IFT140Q96RY7 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
IFT140Q96RY7 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
IFT140Q96RY7 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
IFT140Q96RY7 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.57□□□□□ -1.52
IFT140Q96RY7 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
IFT140Q96RY7 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
IFT140Q96RY7 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC5.57□□□□□ -1.52
IFT140Q96RY7 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC5.57□□□□□ -1.52
IFT140Q96RY7 ANP32BP2-201ENST00000454525 545 ntBASIC5.57□□□□□ -1.52
IFT140Q96RY7 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC5.57□□□□□ -1.52
IFT140Q96RY7 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC5.57□□□□□ -1.52
IFT140Q96RY7 AC105227.2-201ENST00000615075 605 ntBASIC5.57□□□□□ -1.52
IFT140Q96RY7 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
IFT140Q96RY7 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
IFT140Q96RY7 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
IFT140Q96RY7 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
IFT140Q96RY7 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
IFT140Q96RY7 CPD-202ENST00000543464 4007 ntTSL 2 BASIC5.56□□□□□ -1.52
IFT140Q96RY7 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
IFT140Q96RY7 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
IFT140Q96RY7 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
IFT140Q96RY7 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC5.56□□□□□ -1.52
IFT140Q96RY7 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC5.56□□□□□ -1.52
IFT140Q96RY7 AC084357.1-201ENST00000473404 255 ntBASIC5.56□□□□□ -1.52
IFT140Q96RY7 ARL4AP1-201ENST00000503220 705 ntBASIC5.56□□□□□ -1.52
IFT140Q96RY7 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC5.56□□□□□ -1.52
IFT140Q96RY7 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC5.56□□□□□ -1.52
IFT140Q96RY7 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC5.56□□□□□ -1.52
IFT140Q96RY7 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC5.56□□□□□ -1.52
IFT140Q96RY7 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC5.56□□□□□ -1.52
IFT140Q96RY7 AC104763.2-201ENST00000604179 382 ntBASIC5.56□□□□□ -1.52
IFT140Q96RY7 OFD1P6Y-202ENST00000451061 2724 ntBASIC5.56□□□□□ -1.52
IFT140Q96RY7 AC019072.1-201ENST00000604535 1551 ntBASIC5.56□□□□□ -1.52
IFT140Q96RY7 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
IFT140Q96RY7 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
IFT140Q96RY7 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
IFT140Q96RY7 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
IFT140Q96RY7 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC5.55□□□□□ -1.52
IFT140Q96RY7 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
IFT140Q96RY7 AC000041.1-201ENST00000439655 175 ntBASIC5.55□□□□□ -1.52
IFT140Q96RY7 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC5.55□□□□□ -1.52
IFT140Q96RY7 LYZ-203ENST00000549690 669 ntTSL 2 BASIC5.55□□□□□ -1.52
IFT140Q96RY7 GTF3AP2-201ENST00000557014 266 ntBASIC5.55□□□□□ -1.52
IFT140Q96RY7 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC5.55□□□□□ -1.52
IFT140Q96RY7 RDM1-219ENST00000615378 542 ntTSL 3 BASIC5.55□□□□□ -1.52
IFT140Q96RY7 AL359693.1-201ENST00000614959 2407 ntBASIC5.55□□□□□ -1.52
IFT140Q96RY7 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
IFT140Q96RY7 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.55□□□□□ -1.52
IFT140Q96RY7 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC5.54□□□□□ -1.52
IFT140Q96RY7 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
IFT140Q96RY7 OR5J1P-201ENST00000313544 939 ntBASIC5.54□□□□□ -1.52
IFT140Q96RY7 RNU1-108P-201ENST00000362556 161 ntBASIC5.54□□□□□ -1.52
IFT140Q96RY7 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC5.54□□□□□ -1.52
IFT140Q96RY7 MOB1AP1-201ENST00000430903 535 ntBASIC5.54□□□□□ -1.52
IFT140Q96RY7 AP005262.1-201ENST00000582646 997 ntBASIC5.54□□□□□ -1.52
IFT140Q96RY7 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC5.54□□□□□ -1.52
IFT140Q96RY7 TUG1_1.1-201ENST00000610654 145 ntBASIC5.54□□□□□ -1.52
IFT140Q96RY7 AC018692.3-201ENST00000623929 123 ntBASIC5.54□□□□□ -1.52
IFT140Q96RY7 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC5.54□□□□□ -1.52
IFT140Q96RY7 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
IFT140Q96RY7 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.54□□□□□ -1.52
IFT140Q96RY7 THAP12P8-201ENST00000447914 2115 ntBASIC5.54□□□□□ -1.52
IFT140Q96RY7 AL022311.1-201ENST00000623726 19416 ntBASIC5.54□□□□□ -1.52
IFT140Q96RY7 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
IFT140Q96RY7 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
IFT140Q96RY7 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
IFT140Q96RY7 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
IFT140Q96RY7 AC139713.2-215ENST00000641428 5037 ntBASIC5.53□□□□□ -1.52
IFT140Q96RY7 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.53□□□□□ -1.52
IFT140Q96RY7 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC5.53□□□□□ -1.52
IFT140Q96RY7 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms