Protein–RNA interactions for Protein: Q96RK1

CITED4, Cbp/p300-interacting transactivator 4, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CITED4Q96RK1 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC5.7□□□□□ -1.5
CITED4Q96RK1 AC015801.1-201ENST00000585651 153 ntBASIC5.7□□□□□ -1.5
CITED4Q96RK1 AC093074.1-201ENST00000590280 556 ntTSL 4 BASIC5.7□□□□□ -1.5
CITED4Q96RK1 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC5.7□□□□□ -1.5
CITED4Q96RK1 AC079315.1-201ENST00000602952 623 ntBASIC5.7□□□□□ -1.5
CITED4Q96RK1 AL021918.1-201ENST00000603933 236 ntBASIC5.7□□□□□ -1.5
CITED4Q96RK1 RPS28P1-201ENST00000604589 187 ntBASIC5.7□□□□□ -1.5
CITED4Q96RK1 AP001521.2-201ENST00000608772 546 ntBASIC5.7□□□□□ -1.5
CITED4Q96RK1 AL390240.1-201ENST00000612950 384 ntBASIC5.7□□□□□ -1.5
CITED4Q96RK1 OR1N1-202ENST00000619659 939 ntBASIC5.7□□□□□ -1.5
CITED4Q96RK1 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.7□□□□□ -1.5
CITED4Q96RK1 AL162377.2-201ENST00000624532 337 ntBASIC5.7□□□□□ -1.5
CITED4Q96RK1 AC233280.20-201ENST00000637412 416 ntBASIC5.7□□□□□ -1.5
CITED4Q96RK1 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CITED4Q96RK1 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CITED4Q96RK1 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CITED4Q96RK1 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
CITED4Q96RK1 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
CITED4Q96RK1 BCORP1-203ENST00000513194 5093 ntBASIC5.7□□□□□ -1.5
CITED4Q96RK1 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CITED4Q96RK1 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.7□□□□□ -1.5
CITED4Q96RK1 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
CITED4Q96RK1 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC5.7□□□□□ -1.5
CITED4Q96RK1 LRMP-204ENST00000547044 2208 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
CITED4Q96RK1 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.7□□□□□ -1.5
CITED4Q96RK1 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CITED4Q96RK1 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.69□□□□□ -1.5
CITED4Q96RK1 SNX16-202ENST00000353788 3032 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CITED4Q96RK1 USP44-208ENST00000552440 1818 ntTSL 5 BASIC5.69□□□□□ -1.5
CITED4Q96RK1 PABPC1P7-201ENST00000413177 1513 ntBASIC5.69□□□□□ -1.5
CITED4Q96RK1 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC5.69□□□□□ -1.5
CITED4Q96RK1 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CITED4Q96RK1 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
CITED4Q96RK1 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CITED4Q96RK1 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CITED4Q96RK1 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
CITED4Q96RK1 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
CITED4Q96RK1 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
CITED4Q96RK1 Y_RNA.132-201ENST00000363421 102 ntBASIC5.69□□□□□ -1.5
CITED4Q96RK1 Y_RNA.315-201ENST00000365117 102 ntBASIC5.69□□□□□ -1.5
CITED4Q96RK1 Y_RNA.378-201ENST00000365652 113 ntBASIC5.69□□□□□ -1.5
CITED4Q96RK1 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
CITED4Q96RK1 SNORD15A-201ENST00000384214 148 ntBASIC5.69□□□□□ -1.5
CITED4Q96RK1 Y_RNA.530-201ENST00000384587 101 ntBASIC5.69□□□□□ -1.5
CITED4Q96RK1 KCNAB1-202ENST00000389634 1119 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CITED4Q96RK1 Y_RNA.579-201ENST00000390939 94 ntBASIC5.69□□□□□ -1.5
CITED4Q96RK1 RPL21P24-201ENST00000413752 448 ntBASIC5.69□□□□□ -1.5
CITED4Q96RK1 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC5.69□□□□□ -1.5
CITED4Q96RK1 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CITED4Q96RK1 RPL23AP38-201ENST00000423801 469 ntBASIC5.69□□□□□ -1.5
CITED4Q96RK1 PPIL1P1-201ENST00000423936 499 ntBASIC5.69□□□□□ -1.5
CITED4Q96RK1 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC5.69□□□□□ -1.5
CITED4Q96RK1 AC083862.1-201ENST00000427378 1242 ntBASIC5.69□□□□□ -1.5
CITED4Q96RK1 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC5.69□□□□□ -1.5
CITED4Q96RK1 AC007967.1-201ENST00000455422 1159 ntBASIC5.69□□□□□ -1.5
CITED4Q96RK1 AC004801.2-202ENST00000463559 283 ntBASIC5.69□□□□□ -1.5
CITED4Q96RK1 RPL23P10-201ENST00000468780 412 ntBASIC5.69□□□□□ -1.5
CITED4Q96RK1 AC094085.1-201ENST00000468914 584 ntBASIC5.69□□□□□ -1.5
CITED4Q96RK1 AC090602.1-201ENST00000469695 252 ntBASIC5.69□□□□□ -1.5
CITED4Q96RK1 RN7SL58P-201ENST00000473445 294 ntBASIC5.69□□□□□ -1.5
CITED4Q96RK1 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC5.69□□□□□ -1.5
CITED4Q96RK1 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC5.69□□□□□ -1.5
CITED4Q96RK1 AC096576.1-201ENST00000489014 359 ntBASIC5.69□□□□□ -1.5
CITED4Q96RK1 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC5.69□□□□□ -1.5
CITED4Q96RK1 RN7SL776P-201ENST00000493390 268 ntBASIC5.69□□□□□ -1.5
CITED4Q96RK1 RPL23AP55-201ENST00000498163 452 ntBASIC5.69□□□□□ -1.5
CITED4Q96RK1 Y_RNA.682-201ENST00000516457 100 ntBASIC5.69□□□□□ -1.5
CITED4Q96RK1 RNU6-1092P-201ENST00000516955 87 ntBASIC5.69□□□□□ -1.5
CITED4Q96RK1 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC5.69□□□□□ -1.5
CITED4Q96RK1 AC103783.1-201ENST00000520506 373 ntBASIC5.69□□□□□ -1.5
CITED4Q96RK1 AC011410.1-201ENST00000524175 705 ntTSL 5 BASIC5.69□□□□□ -1.5
CITED4Q96RK1 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC5.69□□□□□ -1.5
CITED4Q96RK1 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC5.69□□□□□ -1.5
CITED4Q96RK1 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.69□□□□□ -1.5
CITED4Q96RK1 AL591767.3-201ENST00000554632 525 ntBASIC5.69□□□□□ -1.5
CITED4Q96RK1 AC093249.1-201ENST00000567049 203 ntBASIC5.69□□□□□ -1.5
CITED4Q96RK1 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC5.69□□□□□ -1.5
CITED4Q96RK1 MIR4293-201ENST00000584305 78 ntBASIC5.69□□□□□ -1.5
CITED4Q96RK1 OR7E94P-202ENST00000601375 790 ntBASIC5.69□□□□□ -1.5
CITED4Q96RK1 AC053481.5-201ENST00000602932 397 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
CITED4Q96RK1 AC008638.3-201ENST00000603341 463 ntBASIC5.69□□□□□ -1.5
CITED4Q96RK1 AC008385.1-201ENST00000604421 355 ntBASIC5.69□□□□□ -1.5
CITED4Q96RK1 CTHRC1P1-201ENST00000605383 469 ntBASIC5.69□□□□□ -1.5
CITED4Q96RK1 AL162730.1-201ENST00000605734 292 ntBASIC5.69□□□□□ -1.5
CITED4Q96RK1 AC092807.2-201ENST00000609367 243 ntBASIC5.69□□□□□ -1.5
CITED4Q96RK1 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC5.69□□□□□ -1.5
CITED4Q96RK1 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC5.69□□□□□ -1.5
CITED4Q96RK1 AC084781.2-201ENST00000615568 161 ntBASIC5.69□□□□□ -1.5
CITED4Q96RK1 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
CITED4Q96RK1 AC120057.5-201ENST00000623840 154 ntBASIC5.69□□□□□ -1.5
CITED4Q96RK1 AC073488.8-201ENST00000631952 757 ntBASIC5.69□□□□□ -1.5
CITED4Q96RK1 AL513321.2-202ENST00000634479 921 ntTSL 5 BASIC5.69□□□□□ -1.5
CITED4Q96RK1 CYP4F35P-202ENST00000636121 390 ntBASIC5.69□□□□□ -1.5
CITED4Q96RK1 AC007603.3-201ENST00000636915 979 ntBASIC5.69□□□□□ -1.5
CITED4Q96RK1 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
CITED4Q96RK1 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
CITED4Q96RK1 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CITED4Q96RK1 ATP5A1P4-201ENST00000556888 1605 ntBASIC5.69□□□□□ -1.5
CITED4Q96RK1 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
CITED4Q96RK1 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 141 ms