Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 AC011037.1-201ENST00000483964 558 ntBASIC4.34□□□□□ -1.71
SLC44A1Q8WWI5 AC025554.1-201ENST00000505641 188 ntBASIC4.34□□□□□ -1.71
SLC44A1Q8WWI5 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.34□□□□□ -1.71
SLC44A1Q8WWI5 HNRNPKP5-201ENST00000515300 253 ntBASIC4.34□□□□□ -1.71
SLC44A1Q8WWI5 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC4.34□□□□□ -1.71
SLC44A1Q8WWI5 IGKV1-32-201ENST00000519290 311 ntBASIC4.34□□□□□ -1.71
SLC44A1Q8WWI5 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.34□□□□□ -1.71
SLC44A1Q8WWI5 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.34□□□□□ -1.71
SLC44A1Q8WWI5 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC4.34□□□□□ -1.71
SLC44A1Q8WWI5 AC090819.1-201ENST00000523800 1111 ntBASIC4.34□□□□□ -1.71
SLC44A1Q8WWI5 OR5BC1P-201ENST00000529327 739 ntBASIC4.34□□□□□ -1.71
SLC44A1Q8WWI5 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC4.34□□□□□ -1.71
SLC44A1Q8WWI5 AP006289.1-201ENST00000538089 277 ntBASIC4.34□□□□□ -1.71
SLC44A1Q8WWI5 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC4.34□□□□□ -1.71
SLC44A1Q8WWI5 NIFKP8-201ENST00000560500 874 ntBASIC4.34□□□□□ -1.71
SLC44A1Q8WWI5 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC4.34□□□□□ -1.71
SLC44A1Q8WWI5 Z99289.3-201ENST00000605586 594 ntBASIC4.34□□□□□ -1.71
SLC44A1Q8WWI5 AC016877.3-201ENST00000606778 504 ntBASIC4.34□□□□□ -1.71
SLC44A1Q8WWI5 AP000238.1-201ENST00000608759 426 ntBASIC4.34□□□□□ -1.71
SLC44A1Q8WWI5 AC099676.1-201ENST00000608886 657 ntBASIC4.34□□□□□ -1.71
SLC44A1Q8WWI5 AL592148.2-201ENST00000612210 372 ntBASIC4.34□□□□□ -1.71
SLC44A1Q8WWI5 AC078899.5-201ENST00000612475 178 ntBASIC4.34□□□□□ -1.71
SLC44A1Q8WWI5 AL133243.1-201ENST00000614487 366 ntBASIC4.34□□□□□ -1.71
SLC44A1Q8WWI5 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
SLC44A1Q8WWI5 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SLC44A1Q8WWI5 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.34□□□□□ -1.71
SLC44A1Q8WWI5 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC4.34□□□□□ -1.71
SLC44A1Q8WWI5 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC4.34□□□□□ -1.71
SLC44A1Q8WWI5 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
SLC44A1Q8WWI5 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.34□□□□□ -1.71
SLC44A1Q8WWI5 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.34□□□□□ -1.71
SLC44A1Q8WWI5 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.72
SLC44A1Q8WWI5 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.72
SLC44A1Q8WWI5 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SLC44A1Q8WWI5 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.33□□□□□ -1.72
SLC44A1Q8WWI5 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SLC44A1Q8WWI5 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.33□□□□□ -1.72
SLC44A1Q8WWI5 AC000367.1-201ENST00000452711 1766 ntBASIC4.33□□□□□ -1.72
SLC44A1Q8WWI5 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SLC44A1Q8WWI5 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
SLC44A1Q8WWI5 AC025263.3-201ENST00000622965 1396 ntBASIC4.33□□□□□ -1.72
SLC44A1Q8WWI5 OR11H5P-202ENST00000641612 1325 ntBASIC4.33□□□□□ -1.72
SLC44A1Q8WWI5 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
SLC44A1Q8WWI5 RNU1-130P-201ENST00000363930 160 ntBASIC4.33□□□□□ -1.72
SLC44A1Q8WWI5 RNA5SP505-201ENST00000364748 108 ntBASIC4.33□□□□□ -1.72
SLC44A1Q8WWI5 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
SLC44A1Q8WWI5 RNU6-398P-201ENST00000384143 109 ntBASIC4.33□□□□□ -1.72
SLC44A1Q8WWI5 MIR192-201ENST00000384915 110 ntBASIC4.33□□□□□ -1.72
SLC44A1Q8WWI5 MIR16-1-201ENST00000385271 89 ntBASIC4.33□□□□□ -1.72
SLC44A1Q8WWI5 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
SLC44A1Q8WWI5 MIR298-201ENST00000401212 88 ntBASIC4.33□□□□□ -1.72
SLC44A1Q8WWI5 RN7SKP106-201ENST00000410832 272 ntBASIC4.33□□□□□ -1.72
SLC44A1Q8WWI5 RNA5SP39-201ENST00000411245 120 ntBASIC4.33□□□□□ -1.72
SLC44A1Q8WWI5 AL807761.1-201ENST00000417622 171 ntBASIC4.33□□□□□ -1.72
SLC44A1Q8WWI5 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.33□□□□□ -1.72
SLC44A1Q8WWI5 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC4.33□□□□□ -1.72
SLC44A1Q8WWI5 ZDHHC20P2-201ENST00000424108 429 ntBASIC4.33□□□□□ -1.72
SLC44A1Q8WWI5 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.33□□□□□ -1.72
SLC44A1Q8WWI5 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC4.33□□□□□ -1.72
SLC44A1Q8WWI5 RPS20P1-201ENST00000434853 354 ntBASIC4.33□□□□□ -1.72
SLC44A1Q8WWI5 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.33□□□□□ -1.72
SLC44A1Q8WWI5 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC4.33□□□□□ -1.72
SLC44A1Q8WWI5 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.33□□□□□ -1.72
SLC44A1Q8WWI5 AC073264.2-201ENST00000448886 166 ntBASIC4.33□□□□□ -1.72
SLC44A1Q8WWI5 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC4.33□□□□□ -1.72
SLC44A1Q8WWI5 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC4.33□□□□□ -1.72
SLC44A1Q8WWI5 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.33□□□□□ -1.72
SLC44A1Q8WWI5 PPIAP21-201ENST00000464473 501 ntBASIC4.33□□□□□ -1.72
SLC44A1Q8WWI5 PRDX3P4-201ENST00000470828 747 ntBASIC4.33□□□□□ -1.72
SLC44A1Q8WWI5 AC006463.2-201ENST00000473326 348 ntBASIC4.33□□□□□ -1.72
SLC44A1Q8WWI5 RPL12P20-201ENST00000475538 479 ntBASIC4.33□□□□□ -1.72
SLC44A1Q8WWI5 AC006517.1-201ENST00000480485 328 ntBASIC4.33□□□□□ -1.72
SLC44A1Q8WWI5 GAPDHP39-201ENST00000481866 979 ntBASIC4.33□□□□□ -1.72
SLC44A1Q8WWI5 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC4.33□□□□□ -1.72
SLC44A1Q8WWI5 RPL23AP72-201ENST00000492447 435 ntBASIC4.33□□□□□ -1.72
SLC44A1Q8WWI5 AC139783.2-201ENST00000504847 1145 ntBASIC4.33□□□□□ -1.72
SLC44A1Q8WWI5 AC118282.2-201ENST00000508739 374 ntBASIC4.33□□□□□ -1.72
SLC44A1Q8WWI5 AC113347.3-201ENST00000509113 148 ntBASIC4.33□□□□□ -1.72
SLC44A1Q8WWI5 AC092593.2-201ENST00000513866 913 ntBASIC4.33□□□□□ -1.72
SLC44A1Q8WWI5 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.33□□□□□ -1.72
SLC44A1Q8WWI5 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SLC44A1Q8WWI5 MTCO2P15-201ENST00000532655 656 ntBASIC4.33□□□□□ -1.72
SLC44A1Q8WWI5 OR5AN2P-201ENST00000534535 896 ntBASIC4.33□□□□□ -1.72
SLC44A1Q8WWI5 AC006064.5-201ENST00000541782 248 ntBASIC4.33□□□□□ -1.72
SLC44A1Q8WWI5 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.33□□□□□ -1.72
SLC44A1Q8WWI5 AL109766.1-201ENST00000555080 552 ntBASIC4.33□□□□□ -1.72
SLC44A1Q8WWI5 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.33□□□□□ -1.72
SLC44A1Q8WWI5 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC4.33□□□□□ -1.72
SLC44A1Q8WWI5 RN7SL690P-201ENST00000582087 240 ntBASIC4.33□□□□□ -1.72
SLC44A1Q8WWI5 VN1R83P-201ENST00000595685 445 ntBASIC4.33□□□□□ -1.72
SLC44A1Q8WWI5 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC4.33□□□□□ -1.72
SLC44A1Q8WWI5 AC012603.1-201ENST00000606424 528 ntBASIC4.33□□□□□ -1.72
SLC44A1Q8WWI5 AL445423.1-201ENST00000609941 536 ntBASIC4.33□□□□□ -1.72
SLC44A1Q8WWI5 AC064801.1-201ENST00000612025 407 ntBASIC4.33□□□□□ -1.72
SLC44A1Q8WWI5 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SLC44A1Q8WWI5 AL021997.2-201ENST00000615674 271 ntBASIC4.33□□□□□ -1.72
SLC44A1Q8WWI5 Z99129.2-201ENST00000619967 314 ntBASIC4.33□□□□□ -1.72
SLC44A1Q8WWI5 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC4.33□□□□□ -1.72
SLC44A1Q8WWI5 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
SLC44A1Q8WWI5 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms