Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 AC009220.1-201ENST00000451614 275 ntBASIC3.67□□□□□ -1.82
CLHC1Q8NHS4 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC3.67□□□□□ -1.82
CLHC1Q8NHS4 RPS20P21-201ENST00000466859 343 ntBASIC3.67□□□□□ -1.82
CLHC1Q8NHS4 NDUFA5P2-201ENST00000519723 344 ntBASIC3.67□□□□□ -1.82
CLHC1Q8NHS4 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC3.67□□□□□ -1.82
CLHC1Q8NHS4 AC022695.1-201ENST00000522089 237 ntBASIC3.67□□□□□ -1.82
CLHC1Q8NHS4 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CLHC1Q8NHS4 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.67□□□□□ -1.82
CLHC1Q8NHS4 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.67□□□□□ -1.82
CLHC1Q8NHS4 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.67□□□□□ -1.82
CLHC1Q8NHS4 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.67□□□□□ -1.82
CLHC1Q8NHS4 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.67□□□□□ -1.82
CLHC1Q8NHS4 AL390816.3-201ENST00000604527 1066 ntBASIC3.67□□□□□ -1.82
CLHC1Q8NHS4 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.67□□□□□ -1.82
CLHC1Q8NHS4 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.67□□□□□ -1.82
CLHC1Q8NHS4 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC3.67□□□□□ -1.82
CLHC1Q8NHS4 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
CLHC1Q8NHS4 OR52H1-202ENST00000641796 1061 ntBASIC3.67□□□□□ -1.82
CLHC1Q8NHS4 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CLHC1Q8NHS4 LINC00561-201ENST00000565815 2738 ntBASIC3.67□□□□□ -1.82
CLHC1Q8NHS4 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.67□□□□□ -1.82
CLHC1Q8NHS4 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CLHC1Q8NHS4 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.67□□□□□ -1.82
CLHC1Q8NHS4 RPS4XP5-202ENST00000449995 1334 ntBASIC3.67□□□□□ -1.82
CLHC1Q8NHS4 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CLHC1Q8NHS4 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CLHC1Q8NHS4 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CLHC1Q8NHS4 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC3.67□□□□□ -1.82
CLHC1Q8NHS4 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
CLHC1Q8NHS4 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CLHC1Q8NHS4 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CLHC1Q8NHS4 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CLHC1Q8NHS4 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
CLHC1Q8NHS4 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
CLHC1Q8NHS4 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
CLHC1Q8NHS4 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
CLHC1Q8NHS4 RPL32P3-201ENST00000359025 275 ntBASIC3.66□□□□□ -1.82
CLHC1Q8NHS4 AL022722.2-201ENST00000402519 180 ntBASIC3.66□□□□□ -1.82
CLHC1Q8NHS4 RAB28P1-201ENST00000411517 641 ntBASIC3.66□□□□□ -1.82
CLHC1Q8NHS4 AC007563.3-201ENST00000433233 371 ntBASIC3.66□□□□□ -1.82
CLHC1Q8NHS4 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.66□□□□□ -1.82
CLHC1Q8NHS4 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.66□□□□□ -1.82
CLHC1Q8NHS4 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC3.66□□□□□ -1.82
CLHC1Q8NHS4 RPL37P3-201ENST00000456825 293 ntBASIC3.66□□□□□ -1.82
CLHC1Q8NHS4 RPL21P11-201ENST00000461458 483 ntBASIC3.66□□□□□ -1.82
CLHC1Q8NHS4 RN7SL93P-201ENST00000463035 293 ntBASIC3.66□□□□□ -1.82
CLHC1Q8NHS4 RPL7P19-201ENST00000469948 618 ntBASIC3.66□□□□□ -1.82
CLHC1Q8NHS4 AC084198.1-201ENST00000477747 402 ntBASIC3.66□□□□□ -1.82
CLHC1Q8NHS4 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CLHC1Q8NHS4 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC3.66□□□□□ -1.82
CLHC1Q8NHS4 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CLHC1Q8NHS4 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.66□□□□□ -1.82
CLHC1Q8NHS4 RAC1P2-201ENST00000511164 579 ntBASIC3.66□□□□□ -1.82
CLHC1Q8NHS4 AC093755.1-201ENST00000512950 1023 ntBASIC3.66□□□□□ -1.82
CLHC1Q8NHS4 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC3.66□□□□□ -1.82
CLHC1Q8NHS4 OR8L1P-201ENST00000534005 955 ntBASIC3.66□□□□□ -1.82
CLHC1Q8NHS4 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC3.66□□□□□ -1.82
CLHC1Q8NHS4 AC120057.2-201ENST00000571520 271 ntBASIC3.66□□□□□ -1.82
CLHC1Q8NHS4 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC3.66□□□□□ -1.82
CLHC1Q8NHS4 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.66□□□□□ -1.82
CLHC1Q8NHS4 AC079684.1-201ENST00000621405 437 ntBASIC3.66□□□□□ -1.82
CLHC1Q8NHS4 MIR6500-201ENST00000622700 86 ntBASIC3.66□□□□□ -1.82
CLHC1Q8NHS4 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
CLHC1Q8NHS4 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
CLHC1Q8NHS4 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CLHC1Q8NHS4 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.66□□□□□ -1.82
CLHC1Q8NHS4 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.65□□□□□ -1.82
CLHC1Q8NHS4 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.82
CLHC1Q8NHS4 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC3.65□□□□□ -1.82
CLHC1Q8NHS4 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
CLHC1Q8NHS4 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
CLHC1Q8NHS4 RNA5SP391-201ENST00000363456 119 ntBASIC3.65□□□□□ -1.83
CLHC1Q8NHS4 RNU6-670P-201ENST00000364312 104 ntBASIC3.65□□□□□ -1.83
CLHC1Q8NHS4 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
CLHC1Q8NHS4 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.65□□□□□ -1.83
CLHC1Q8NHS4 AC009237.5-201ENST00000414271 501 ntBASIC3.65□□□□□ -1.83
CLHC1Q8NHS4 XKRYP4-201ENST00000414395 483 ntBASIC3.65□□□□□ -1.83
CLHC1Q8NHS4 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC3.65□□□□□ -1.83
CLHC1Q8NHS4 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.65□□□□□ -1.83
CLHC1Q8NHS4 SETP5-201ENST00000437270 562 ntBASIC3.65□□□□□ -1.83
CLHC1Q8NHS4 TPT1P12-201ENST00000448968 492 ntBASIC3.65□□□□□ -1.83
CLHC1Q8NHS4 XKRYP5-201ENST00000449659 483 ntBASIC3.65□□□□□ -1.83
CLHC1Q8NHS4 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC3.65□□□□□ -1.83
CLHC1Q8NHS4 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.65□□□□□ -1.83
CLHC1Q8NHS4 AC026979.1-201ENST00000492525 396 ntBASIC3.65□□□□□ -1.83
CLHC1Q8NHS4 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC3.65□□□□□ -1.83
CLHC1Q8NHS4 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CLHC1Q8NHS4 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC3.65□□□□□ -1.83
CLHC1Q8NHS4 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.65□□□□□ -1.83
CLHC1Q8NHS4 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.65□□□□□ -1.83
CLHC1Q8NHS4 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.65□□□□□ -1.83
CLHC1Q8NHS4 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC3.65□□□□□ -1.83
CLHC1Q8NHS4 AC015726.1-201ENST00000602353 681 ntBASIC3.65□□□□□ -1.83
CLHC1Q8NHS4 AC006254.3-201ENST00000603353 884 ntBASIC3.65□□□□□ -1.83
CLHC1Q8NHS4 AC011468.4-201ENST00000603942 409 ntBASIC3.65□□□□□ -1.83
CLHC1Q8NHS4 AL023583.1-201ENST00000607518 1143 ntBASIC3.65□□□□□ -1.83
CLHC1Q8NHS4 AC090425.2-201ENST00000608818 501 ntBASIC3.65□□□□□ -1.83
CLHC1Q8NHS4 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.65□□□□□ -1.83
CLHC1Q8NHS4 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.65□□□□□ -1.83
CLHC1Q8NHS4 MIR6830-201ENST00000636015 70 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms