Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 AC112198.4-201ENST00000515450 351 ntBASIC3.41□□□□□ -1.86
CCDC71LQ8N9Z2 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.41□□□□□ -1.86
CCDC71LQ8N9Z2 RNU5A-7P-201ENST00000515979 116 ntBASIC3.41□□□□□ -1.86
CCDC71LQ8N9Z2 AP003355.1-201ENST00000518956 587 ntBASIC3.41□□□□□ -1.86
CCDC71LQ8N9Z2 AC010306.1-201ENST00000523223 1117 ntBASIC3.41□□□□□ -1.86
CCDC71LQ8N9Z2 AP003102.1-201ENST00000525638 661 ntBASIC3.41□□□□□ -1.86
CCDC71LQ8N9Z2 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.41□□□□□ -1.86
CCDC71LQ8N9Z2 PTP4A1P6-201ENST00000531034 478 ntBASIC3.41□□□□□ -1.86
CCDC71LQ8N9Z2 AL442163.2-201ENST00000553912 710 ntBASIC3.41□□□□□ -1.86
CCDC71LQ8N9Z2 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC3.41□□□□□ -1.86
CCDC71LQ8N9Z2 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CCDC71LQ8N9Z2 AC012417.1-201ENST00000582307 1039 ntBASIC3.41□□□□□ -1.86
CCDC71LQ8N9Z2 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC3.41□□□□□ -1.86
CCDC71LQ8N9Z2 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC3.41□□□□□ -1.86
CCDC71LQ8N9Z2 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CCDC71LQ8N9Z2 AC113194.1-201ENST00000606037 500 ntBASIC3.41□□□□□ -1.86
CCDC71LQ8N9Z2 AC092953.2-201ENST00000608000 699 ntBASIC3.41□□□□□ -1.86
CCDC71LQ8N9Z2 AC105429.2-201ENST00000610567 517 ntBASIC3.41□□□□□ -1.86
CCDC71LQ8N9Z2 AC090246.1-201ENST00000616499 426 ntBASIC3.41□□□□□ -1.86
CCDC71LQ8N9Z2 AC068880.4-201ENST00000623082 495 ntBASIC3.41□□□□□ -1.86
CCDC71LQ8N9Z2 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.41□□□□□ -1.86
CCDC71LQ8N9Z2 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
CCDC71LQ8N9Z2 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CCDC71LQ8N9Z2 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
CCDC71LQ8N9Z2 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CCDC71LQ8N9Z2 RAD17P1-201ENST00000418130 2042 ntBASIC3.41□□□□□ -1.86
CCDC71LQ8N9Z2 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CCDC71LQ8N9Z2 OR56B2P-202ENST00000641377 2453 ntBASIC3.41□□□□□ -1.86
CCDC71LQ8N9Z2 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
CCDC71LQ8N9Z2 SEC63P2-201ENST00000503863 1939 ntBASIC3.4□□□□□ -1.86
CCDC71LQ8N9Z2 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
CCDC71LQ8N9Z2 AC025031.4-201ENST00000621248 3271 ntBASIC3.4□□□□□ -1.86
CCDC71LQ8N9Z2 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
CCDC71LQ8N9Z2 FAM35DP-201ENST00000323387 2712 ntBASIC3.4□□□□□ -1.86
CCDC71LQ8N9Z2 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
CCDC71LQ8N9Z2 RNU6-354P-201ENST00000383862 107 ntBASIC3.4□□□□□ -1.87
CCDC71LQ8N9Z2 RNU6-610P-201ENST00000384264 107 ntBASIC3.4□□□□□ -1.87
CCDC71LQ8N9Z2 AGR3-202ENST00000402239 563 ntTSL 2 BASIC3.4□□□□□ -1.87
CCDC71LQ8N9Z2 MTHFD2P2-201ENST00000407725 247 ntBASIC3.4□□□□□ -1.87
CCDC71LQ8N9Z2 RNU2-65P-201ENST00000410162 185 ntBASIC3.4□□□□□ -1.87
CCDC71LQ8N9Z2 AL049737.1-201ENST00000413920 1403 ntBASIC3.4□□□□□ -1.87
CCDC71LQ8N9Z2 AC007390.1-201ENST00000415722 356 ntBASIC3.4□□□□□ -1.87
CCDC71LQ8N9Z2 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC3.4□□□□□ -1.87
CCDC71LQ8N9Z2 AC246680.2-201ENST00000422106 389 ntBASIC3.4□□□□□ -1.87
CCDC71LQ8N9Z2 RPS6P14-201ENST00000425165 719 ntBASIC3.4□□□□□ -1.87
CCDC71LQ8N9Z2 AC104837.2-201ENST00000427236 424 ntBASIC3.4□□□□□ -1.87
CCDC71LQ8N9Z2 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC3.4□□□□□ -1.87
CCDC71LQ8N9Z2 FO393414.1-201ENST00000428697 1184 ntBASIC3.4□□□□□ -1.87
CCDC71LQ8N9Z2 RNF2P1-201ENST00000442955 1010 ntBASIC3.4□□□□□ -1.87
CCDC71LQ8N9Z2 PHBP16-201ENST00000446318 950 ntBASIC3.4□□□□□ -1.87
CCDC71LQ8N9Z2 AC005002.1-201ENST00000447458 540 ntBASIC3.4□□□□□ -1.87
CCDC71LQ8N9Z2 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC3.4□□□□□ -1.87
CCDC71LQ8N9Z2 AL096803.2-201ENST00000450032 677 ntBASIC3.4□□□□□ -1.87
CCDC71LQ8N9Z2 MTCO3P20-201ENST00000454926 688 ntBASIC3.4□□□□□ -1.87
CCDC71LQ8N9Z2 DNAJC19P1-201ENST00000455312 319 ntBASIC3.4□□□□□ -1.87
CCDC71LQ8N9Z2 RPL7P32-201ENST00000457119 744 ntBASIC3.4□□□□□ -1.87
CCDC71LQ8N9Z2 AC010307.1-201ENST00000467206 836 ntBASIC3.4□□□□□ -1.87
CCDC71LQ8N9Z2 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC3.4□□□□□ -1.87
CCDC71LQ8N9Z2 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.4□□□□□ -1.87
CCDC71LQ8N9Z2 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC3.4□□□□□ -1.87
CCDC71LQ8N9Z2 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.4□□□□□ -1.87
CCDC71LQ8N9Z2 AC026726.1-201ENST00000512859 601 ntBASIC3.4□□□□□ -1.87
CCDC71LQ8N9Z2 RNU7-143P-201ENST00000516781 65 ntBASIC3.4□□□□□ -1.87
CCDC71LQ8N9Z2 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC3.4□□□□□ -1.87
CCDC71LQ8N9Z2 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC3.4□□□□□ -1.87
CCDC71LQ8N9Z2 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CCDC71LQ8N9Z2 RARSP1-201ENST00000542842 1418 ntBASIC3.4□□□□□ -1.87
CCDC71LQ8N9Z2 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC3.4□□□□□ -1.87
CCDC71LQ8N9Z2 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC3.4□□□□□ -1.87
CCDC71LQ8N9Z2 ZNF192P1-203ENST00000565888 810 ntBASIC3.4□□□□□ -1.87
CCDC71LQ8N9Z2 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC3.4□□□□□ -1.87
CCDC71LQ8N9Z2 RPL23AP87-202ENST00000573039 466 ntBASIC3.4□□□□□ -1.87
CCDC71LQ8N9Z2 MIR5047-201ENST00000579212 100 ntBASIC3.4□□□□□ -1.87
CCDC71LQ8N9Z2 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC3.4□□□□□ -1.87
CCDC71LQ8N9Z2 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC3.4□□□□□ -1.87
CCDC71LQ8N9Z2 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC3.4□□□□□ -1.87
CCDC71LQ8N9Z2 AC018754.1-201ENST00000607486 925 ntBASIC3.4□□□□□ -1.87
CCDC71LQ8N9Z2 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.4□□□□□ -1.87
CCDC71LQ8N9Z2 AC021851.1-201ENST00000608537 1082 ntBASIC3.4□□□□□ -1.87
CCDC71LQ8N9Z2 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.4□□□□□ -1.87
CCDC71LQ8N9Z2 AC078880.5-201ENST00000617845 421 ntBASIC3.4□□□□□ -1.87
CCDC71LQ8N9Z2 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC3.4□□□□□ -1.87
CCDC71LQ8N9Z2 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CCDC71LQ8N9Z2 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.4□□□□□ -1.87
CCDC71LQ8N9Z2 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.87
CCDC71LQ8N9Z2 HSPA8P1-201ENST00000425843 1833 ntBASIC3.4□□□□□ -1.87
CCDC71LQ8N9Z2 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CCDC71LQ8N9Z2 AL592148.3-201ENST00000608771 2646 ntBASIC3.4□□□□□ -1.87
CCDC71LQ8N9Z2 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CCDC71LQ8N9Z2 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.39□□□□□ -1.87
CCDC71LQ8N9Z2 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CCDC71LQ8N9Z2 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC3.39□□□□□ -1.87
CCDC71LQ8N9Z2 EIF2AP4-201ENST00000424793 1781 ntBASIC3.39□□□□□ -1.87
CCDC71LQ8N9Z2 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CCDC71LQ8N9Z2 RNU1-14P-201ENST00000362759 152 ntBASIC3.39□□□□□ -1.87
CCDC71LQ8N9Z2 RNU6-1339P-201ENST00000363574 91 ntBASIC3.39□□□□□ -1.87
CCDC71LQ8N9Z2 SNORD35B-201ENST00000363660 87 ntBASIC3.39□□□□□ -1.87
CCDC71LQ8N9Z2 SNORA70F-201ENST00000384142 135 ntBASIC3.39□□□□□ -1.87
CCDC71LQ8N9Z2 MIR153-1-201ENST00000384914 90 ntBASIC3.39□□□□□ -1.87
CCDC71LQ8N9Z2 AL035405.1-201ENST00000400795 710 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms