Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 RNA5SP31-201ENST00000411144 127 ntBASIC5.16□□□□□ -1.58
VPS8Q8N3P4 RNU6-954P-201ENST00000411355 107 ntBASIC5.16□□□□□ -1.58
VPS8Q8N3P4 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
VPS8Q8N3P4 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC5.16□□□□□ -1.58
VPS8Q8N3P4 AL356968.1-201ENST00000416622 474 ntBASIC5.16□□□□□ -1.58
VPS8Q8N3P4 AL512649.1-201ENST00000428997 581 ntBASIC5.16□□□□□ -1.58
VPS8Q8N3P4 ETF1P3-201ENST00000430422 1160 ntBASIC5.16□□□□□ -1.58
VPS8Q8N3P4 AL121877.1-201ENST00000453704 622 ntBASIC5.16□□□□□ -1.58
VPS8Q8N3P4 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC5.16□□□□□ -1.58
VPS8Q8N3P4 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC5.16□□□□□ -1.58
VPS8Q8N3P4 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC5.16□□□□□ -1.58
VPS8Q8N3P4 AC026422.1-201ENST00000623961 452 ntBASIC5.16□□□□□ -1.58
VPS8Q8N3P4 AC099654.11-201ENST00000638857 294 ntBASIC5.16□□□□□ -1.58
VPS8Q8N3P4 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
VPS8Q8N3P4 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC5.16□□□□□ -1.58
VPS8Q8N3P4 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
VPS8Q8N3P4 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
VPS8Q8N3P4 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC5.16□□□□□ -1.58
VPS8Q8N3P4 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC5.15□□□□□ -1.58
VPS8Q8N3P4 RN7SL807P-201ENST00000470923 297 ntBASIC5.15□□□□□ -1.58
VPS8Q8N3P4 AC006445.1-201ENST00000491925 405 ntBASIC5.15□□□□□ -1.58
VPS8Q8N3P4 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC5.15□□□□□ -1.58
VPS8Q8N3P4 SNORA70.24-201ENST00000517233 118 ntBASIC5.15□□□□□ -1.58
VPS8Q8N3P4 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC5.15□□□□□ -1.58
VPS8Q8N3P4 HIGD1AP1-201ENST00000550979 275 ntBASIC5.15□□□□□ -1.58
VPS8Q8N3P4 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC5.15□□□□□ -1.58
VPS8Q8N3P4 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC5.15□□□□□ -1.58
VPS8Q8N3P4 AC124312.4-201ENST00000605533 310 ntBASIC5.15□□□□□ -1.58
VPS8Q8N3P4 AL157817.1-201ENST00000614264 790 ntBASIC5.15□□□□□ -1.58
VPS8Q8N3P4 uc_338.32-201ENST00000615087 172 ntBASIC5.15□□□□□ -1.58
VPS8Q8N3P4 MIR8057-201ENST00000620957 69 ntBASIC5.15□□□□□ -1.58
VPS8Q8N3P4 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
VPS8Q8N3P4 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC5.15□□□□□ -1.58
VPS8Q8N3P4 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
VPS8Q8N3P4 RHEBP3-201ENST00000411920 351 ntBASIC5.14□□□□□ -1.59
VPS8Q8N3P4 TMX2P1-201ENST00000436507 708 ntBASIC5.14□□□□□ -1.59
VPS8Q8N3P4 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC5.14□□□□□ -1.59
VPS8Q8N3P4 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
VPS8Q8N3P4 AC021146.1-201ENST00000511202 716 ntBASIC5.14□□□□□ -1.59
VPS8Q8N3P4 PTGES3P3-201ENST00000511479 482 ntBASIC5.14□□□□□ -1.59
VPS8Q8N3P4 AC018442.3-201ENST00000523025 183 ntBASIC5.14□□□□□ -1.59
VPS8Q8N3P4 AC015911.5-201ENST00000587076 451 ntBASIC5.14□□□□□ -1.59
VPS8Q8N3P4 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC5.14□□□□□ -1.59
VPS8Q8N3P4 AC105227.2-201ENST00000615075 605 ntBASIC5.14□□□□□ -1.59
VPS8Q8N3P4 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC5.14□□□□□ -1.59
VPS8Q8N3P4 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
VPS8Q8N3P4 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
VPS8Q8N3P4 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC5.14□□□□□ -1.59
VPS8Q8N3P4 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC5.14□□□□□ -1.59
VPS8Q8N3P4 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC5.14□□□□□ -1.59
VPS8Q8N3P4 RNA5SP374-201ENST00000362939 125 ntBASIC5.14□□□□□ -1.59
VPS8Q8N3P4 RPL12P26-201ENST00000452430 487 ntBASIC5.14□□□□□ -1.59
VPS8Q8N3P4 RN7SL504P-201ENST00000494496 287 ntBASIC5.14□□□□□ -1.59
VPS8Q8N3P4 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC5.14□□□□□ -1.59
VPS8Q8N3P4 AL139174.1-201ENST00000531489 886 ntBASIC5.14□□□□□ -1.59
VPS8Q8N3P4 TGIF1P1-201ENST00000558095 802 ntBASIC5.14□□□□□ -1.59
VPS8Q8N3P4 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC5.14□□□□□ -1.59
VPS8Q8N3P4 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
VPS8Q8N3P4 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
VPS8Q8N3P4 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
VPS8Q8N3P4 CD2-201ENST00000369477 478 ntTSL 2 BASIC5.13□□□□□ -1.59
VPS8Q8N3P4 SNORA54-201ENST00000384281 123 ntBASIC5.13□□□□□ -1.59
VPS8Q8N3P4 NACAP7-201ENST00000407371 609 ntBASIC5.13□□□□□ -1.59
VPS8Q8N3P4 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC5.13□□□□□ -1.59
VPS8Q8N3P4 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC5.13□□□□□ -1.59
VPS8Q8N3P4 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC5.13□□□□□ -1.59
VPS8Q8N3P4 AP001636.2-201ENST00000525517 696 ntBASIC5.13□□□□□ -1.59
VPS8Q8N3P4 CFL2-206ENST00000556161 546 ntTSL 4 BASIC5.13□□□□□ -1.59
VPS8Q8N3P4 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC5.13□□□□□ -1.59
VPS8Q8N3P4 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC5.13□□□□□ -1.59
VPS8Q8N3P4 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC5.13□□□□□ -1.59
VPS8Q8N3P4 AC012078.1-201ENST00000405035 1646 ntBASIC5.12□□□□□ -1.59
VPS8Q8N3P4 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
VPS8Q8N3P4 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
VPS8Q8N3P4 AC009237.5-201ENST00000414271 501 ntBASIC5.12□□□□□ -1.59
VPS8Q8N3P4 GLRXP1-201ENST00000423261 334 ntBASIC5.12□□□□□ -1.59
VPS8Q8N3P4 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC5.12□□□□□ -1.59
VPS8Q8N3P4 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
VPS8Q8N3P4 AC026427.2-201ENST00000506228 536 ntBASIC5.12□□□□□ -1.59
VPS8Q8N3P4 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC5.12□□□□□ -1.59
VPS8Q8N3P4 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC5.12□□□□□ -1.59
VPS8Q8N3P4 AC037471.2-201ENST00000564941 598 ntBASIC5.12□□□□□ -1.59
VPS8Q8N3P4 AC015917.1-201ENST00000579654 510 ntBASIC5.12□□□□□ -1.59
VPS8Q8N3P4 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC5.12□□□□□ -1.59
VPS8Q8N3P4 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC5.12□□□□□ -1.59
VPS8Q8N3P4 PCNP-208ENST00000627393 136 ntTSL 2 BASIC5.12□□□□□ -1.59
VPS8Q8N3P4 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC5.12□□□□□ -1.59
VPS8Q8N3P4 AC007496.3-201ENST00000624987 3443 ntBASIC5.12□□□□□ -1.59
VPS8Q8N3P4 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
VPS8Q8N3P4 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC5.11□□□□□ -1.59
VPS8Q8N3P4 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
VPS8Q8N3P4 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC5.11□□□□□ -1.59
VPS8Q8N3P4 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
VPS8Q8N3P4 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
VPS8Q8N3P4 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
VPS8Q8N3P4 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
VPS8Q8N3P4 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC5.11□□□□□ -1.59
VPS8Q8N3P4 RNU6-525P-201ENST00000363685 104 ntBASIC5.11□□□□□ -1.59
VPS8Q8N3P4 U3.19-201ENST00000390893 196 ntBASIC5.11□□□□□ -1.59
VPS8Q8N3P4 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms