Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC6.26□□□□□ -1.41
DEPDC4Q8N2C3 RPL7-201ENST00000352983 1101 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
DEPDC4Q8N2C3 OR10D1P-201ENST00000355343 936 ntBASIC6.26□□□□□ -1.41
DEPDC4Q8N2C3 RNA5SP188-201ENST00000362916 129 ntBASIC6.26□□□□□ -1.41
DEPDC4Q8N2C3 RNU5E-6P-201ENST00000365574 115 ntBASIC6.26□□□□□ -1.41
DEPDC4Q8N2C3 U3.29-201ENST00000391296 212 ntBASIC6.26□□□□□ -1.41
DEPDC4Q8N2C3 RNU2-18P-201ENST00000411224 162 ntBASIC6.26□□□□□ -1.41
DEPDC4Q8N2C3 RNU6-387P-201ENST00000411331 105 ntBASIC6.26□□□□□ -1.41
DEPDC4Q8N2C3 RNU6-603P-201ENST00000411403 107 ntBASIC6.26□□□□□ -1.41
DEPDC4Q8N2C3 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC6.26□□□□□ -1.41
DEPDC4Q8N2C3 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
DEPDC4Q8N2C3 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC6.26□□□□□ -1.41
DEPDC4Q8N2C3 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC6.26□□□□□ -1.41
DEPDC4Q8N2C3 PUDPP2-201ENST00000431423 643 ntBASIC6.26□□□□□ -1.41
DEPDC4Q8N2C3 TEX41-206ENST00000432608 661 ntTSL 3 BASIC6.26□□□□□ -1.41
DEPDC4Q8N2C3 CEACAMP1-201ENST00000434624 1035 ntBASIC6.26□□□□□ -1.41
DEPDC4Q8N2C3 ZDHHC20P1-204ENST00000435787 423 ntBASIC6.26□□□□□ -1.41
DEPDC4Q8N2C3 RPL35AP22-201ENST00000436855 335 ntBASIC6.26□□□□□ -1.41
DEPDC4Q8N2C3 FABP5P14-201ENST00000437273 393 ntBASIC6.26□□□□□ -1.41
DEPDC4Q8N2C3 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC6.26□□□□□ -1.41
DEPDC4Q8N2C3 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC6.26□□□□□ -1.41
DEPDC4Q8N2C3 ELOCP24-201ENST00000456370 334 ntBASIC6.26□□□□□ -1.41
DEPDC4Q8N2C3 AL162395.1-201ENST00000457882 422 ntBASIC6.26□□□□□ -1.41
DEPDC4Q8N2C3 SNORD97-201ENST00000459187 142 ntBASIC6.26□□□□□ -1.41
DEPDC4Q8N2C3 C2orf74-204ENST00000464909 726 ntAPPRIS P2 TSL 2 BASIC6.26□□□□□ -1.41
DEPDC4Q8N2C3 RN7SL849P-201ENST00000485236 295 ntBASIC6.26□□□□□ -1.41
DEPDC4Q8N2C3 UBA52P7-201ENST00000486088 380 ntBASIC6.26□□□□□ -1.41
DEPDC4Q8N2C3 AL591122.1-201ENST00000487348 492 ntBASIC6.26□□□□□ -1.41
DEPDC4Q8N2C3 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC6.26□□□□□ -1.41
DEPDC4Q8N2C3 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC6.26□□□□□ -1.41
DEPDC4Q8N2C3 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC6.26□□□□□ -1.41
DEPDC4Q8N2C3 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC6.26□□□□□ -1.41
DEPDC4Q8N2C3 AC098591.2-201ENST00000510152 315 ntBASIC6.26□□□□□ -1.41
DEPDC4Q8N2C3 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC6.26□□□□□ -1.41
DEPDC4Q8N2C3 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC6.26□□□□□ -1.41
DEPDC4Q8N2C3 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC6.26□□□□□ -1.41
DEPDC4Q8N2C3 AC005699.1-203ENST00000515286 688 ntTSL 3 BASIC6.26□□□□□ -1.41
DEPDC4Q8N2C3 RPS27AP18-201ENST00000515536 459 ntBASIC6.26□□□□□ -1.41
DEPDC4Q8N2C3 SCARNA6-201ENST00000515982 265 ntBASIC6.26□□□□□ -1.41
DEPDC4Q8N2C3 Y_RNA.720-201ENST00000517166 92 ntBASIC6.26□□□□□ -1.41
DEPDC4Q8N2C3 AC060775.1-201ENST00000518241 520 ntBASIC6.26□□□□□ -1.41
DEPDC4Q8N2C3 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC6.26□□□□□ -1.41
DEPDC4Q8N2C3 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC6.26□□□□□ -1.41
DEPDC4Q8N2C3 AP003084.1-201ENST00000524828 742 ntBASIC6.26□□□□□ -1.41
DEPDC4Q8N2C3 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC6.26□□□□□ -1.41
DEPDC4Q8N2C3 COPS8P3-201ENST00000526024 482 ntBASIC6.26□□□□□ -1.41
DEPDC4Q8N2C3 AC093012.1-202ENST00000549403 582 ntBASIC6.26□□□□□ -1.41
DEPDC4Q8N2C3 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC6.26□□□□□ -1.41
DEPDC4Q8N2C3 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC6.26□□□□□ -1.41
DEPDC4Q8N2C3 NDUFA3P4-201ENST00000560814 250 ntBASIC6.26□□□□□ -1.41
DEPDC4Q8N2C3 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC6.26□□□□□ -1.41
DEPDC4Q8N2C3 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC6.26□□□□□ -1.41
DEPDC4Q8N2C3 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC6.26□□□□□ -1.41
DEPDC4Q8N2C3 MIR5690-201ENST00000583739 73 ntBASIC6.26□□□□□ -1.41
DEPDC4Q8N2C3 AC110743.1-201ENST00000584870 478 ntBASIC6.26□□□□□ -1.41
DEPDC4Q8N2C3 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC6.26□□□□□ -1.41
DEPDC4Q8N2C3 GLYATL1P2-202ENST00000588046 902 ntBASIC6.26□□□□□ -1.41
DEPDC4Q8N2C3 AC011447.2-201ENST00000592921 283 ntBASIC6.26□□□□□ -1.41
DEPDC4Q8N2C3 SIGLEC31P-201ENST00000594237 551 ntBASIC6.26□□□□□ -1.41
DEPDC4Q8N2C3 AC097467.4-201ENST00000605504 141 ntBASIC6.26□□□□□ -1.41
DEPDC4Q8N2C3 AL627230.1-201ENST00000613077 211 ntBASIC6.26□□□□□ -1.41
DEPDC4Q8N2C3 AC025034.2-201ENST00000623264 286 ntBASIC6.26□□□□□ -1.41
DEPDC4Q8N2C3 AC244517.12-201ENST00000623581 663 ntBASIC6.26□□□□□ -1.41
DEPDC4Q8N2C3 AC055839.1-201ENST00000634467 498 ntBASIC6.26□□□□□ -1.41
DEPDC4Q8N2C3 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC6.26□□□□□ -1.41
DEPDC4Q8N2C3 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
DEPDC4Q8N2C3 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
DEPDC4Q8N2C3 OSBPL9P4-201ENST00000371707 1800 ntBASIC6.26□□□□□ -1.41
DEPDC4Q8N2C3 MTND5P10-201ENST00000603719 1809 ntBASIC6.26□□□□□ -1.41
DEPDC4Q8N2C3 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.26□□□□□ -1.41
DEPDC4Q8N2C3 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC6.26□□□□□ -1.41
DEPDC4Q8N2C3 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC6.26□□□□□ -1.41
DEPDC4Q8N2C3 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.26□□□□□ -1.41
DEPDC4Q8N2C3 FTO-215ENST00000636491 1676 ntTSL 5 BASIC6.26□□□□□ -1.41
DEPDC4Q8N2C3 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
DEPDC4Q8N2C3 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
DEPDC4Q8N2C3 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
DEPDC4Q8N2C3 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
DEPDC4Q8N2C3 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC6.26□□□□□ -1.41
DEPDC4Q8N2C3 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
DEPDC4Q8N2C3 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC6.26□□□□□ -1.41
DEPDC4Q8N2C3 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
DEPDC4Q8N2C3 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
DEPDC4Q8N2C3 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
DEPDC4Q8N2C3 CASP10-208ENST00000448480 1603 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
DEPDC4Q8N2C3 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC6.25□□□□□ -1.41
DEPDC4Q8N2C3 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
DEPDC4Q8N2C3 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
DEPDC4Q8N2C3 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
DEPDC4Q8N2C3 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
DEPDC4Q8N2C3 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
DEPDC4Q8N2C3 SNORD115-7-201ENST00000365306 82 ntBASIC6.25□□□□□ -1.41
DEPDC4Q8N2C3 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
DEPDC4Q8N2C3 MTERF4-205ENST00000407095 799 ntTSL 2 BASIC6.25□□□□□ -1.41
DEPDC4Q8N2C3 SNORA11D-201ENST00000408548 128 ntBASIC6.25□□□□□ -1.41
DEPDC4Q8N2C3 SNORA11E-201ENST00000408778 128 ntBASIC6.25□□□□□ -1.41
DEPDC4Q8N2C3 RNU2-50P-201ENST00000410494 143 ntBASIC6.25□□□□□ -1.41
DEPDC4Q8N2C3 RNU4-46P-201ENST00000410818 138 ntBASIC6.25□□□□□ -1.41
DEPDC4Q8N2C3 AL591848.1-201ENST00000413092 322 ntBASIC6.25□□□□□ -1.41
DEPDC4Q8N2C3 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC6.25□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms