Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.24□□□□□ -1.73
BEST3Q8N1M1 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC4.24□□□□□ -1.73
BEST3Q8N1M1 AL354943.1-201ENST00000572103 781 ntBASIC4.24□□□□□ -1.73
BEST3Q8N1M1 AC017100.2-201ENST00000584628 355 ntBASIC4.24□□□□□ -1.73
BEST3Q8N1M1 NF1P5-201ENST00000588287 448 ntBASIC4.24□□□□□ -1.73
BEST3Q8N1M1 AL390838.2-201ENST00000602394 274 ntBASIC4.24□□□□□ -1.73
BEST3Q8N1M1 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC4.24□□□□□ -1.73
BEST3Q8N1M1 DPRXP5-201ENST00000604662 539 ntBASIC4.24□□□□□ -1.73
BEST3Q8N1M1 AC096553.1-201ENST00000605169 829 ntBASIC4.24□□□□□ -1.73
BEST3Q8N1M1 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC4.24□□□□□ -1.73
BEST3Q8N1M1 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.24□□□□□ -1.73
BEST3Q8N1M1 AP003392.5-201ENST00000607857 415 ntBASIC4.24□□□□□ -1.73
BEST3Q8N1M1 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.24□□□□□ -1.73
BEST3Q8N1M1 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC4.24□□□□□ -1.73
BEST3Q8N1M1 AP003072.4-201ENST00000624580 310 ntBASIC4.24□□□□□ -1.73
BEST3Q8N1M1 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.24□□□□□ -1.73
BEST3Q8N1M1 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.24□□□□□ -1.73
BEST3Q8N1M1 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
BEST3Q8N1M1 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
BEST3Q8N1M1 AL359922.3-201ENST00000624779 1670 ntBASIC4.24□□□□□ -1.73
BEST3Q8N1M1 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
BEST3Q8N1M1 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC4.24□□□□□ -1.73
BEST3Q8N1M1 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
BEST3Q8N1M1 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
BEST3Q8N1M1 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.24□□□□□ -1.73
BEST3Q8N1M1 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
BEST3Q8N1M1 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.24□□□□□ -1.73
BEST3Q8N1M1 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
BEST3Q8N1M1 AC010300.1-201ENST00000600671 5134 ntBASIC4.23□□□□□ -1.73
BEST3Q8N1M1 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.23□□□□□ -1.73
BEST3Q8N1M1 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.23□□□□□ -1.73
BEST3Q8N1M1 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
BEST3Q8N1M1 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
BEST3Q8N1M1 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.23□□□□□ -1.73
BEST3Q8N1M1 MAPK6PS3-201ENST00000403865 2162 ntBASIC4.23□□□□□ -1.73
BEST3Q8N1M1 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.23□□□□□ -1.73
BEST3Q8N1M1 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
BEST3Q8N1M1 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
BEST3Q8N1M1 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
BEST3Q8N1M1 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
BEST3Q8N1M1 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
BEST3Q8N1M1 SNORD113-6-201ENST00000363345 75 ntBASIC4.23□□□□□ -1.73
BEST3Q8N1M1 Y_RNA.192-201ENST00000363977 102 ntBASIC4.23□□□□□ -1.73
BEST3Q8N1M1 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
BEST3Q8N1M1 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
BEST3Q8N1M1 MIR659-201ENST00000384963 97 ntBASIC4.23□□□□□ -1.73
BEST3Q8N1M1 RNU6-1300P-201ENST00000391046 108 ntBASIC4.23□□□□□ -1.73
BEST3Q8N1M1 AL161909.1-201ENST00000397390 712 ntBASIC4.23□□□□□ -1.73
BEST3Q8N1M1 FABP12P1-201ENST00000401911 322 ntBASIC4.23□□□□□ -1.73
BEST3Q8N1M1 PRRC2CP1-201ENST00000404428 159 ntBASIC4.23□□□□□ -1.73
BEST3Q8N1M1 AC009237.10-201ENST00000414112 510 ntBASIC4.23□□□□□ -1.73
BEST3Q8N1M1 PRELID3BP11-201ENST00000414230 479 ntBASIC4.23□□□□□ -1.73
BEST3Q8N1M1 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.23□□□□□ -1.73
BEST3Q8N1M1 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.23□□□□□ -1.73
BEST3Q8N1M1 AL592293.2-201ENST00000422292 996 ntBASIC4.23□□□□□ -1.73
BEST3Q8N1M1 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC4.23□□□□□ -1.73
BEST3Q8N1M1 RPL7P44-201ENST00000424827 742 ntBASIC4.23□□□□□ -1.73
BEST3Q8N1M1 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.23□□□□□ -1.73
BEST3Q8N1M1 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.23□□□□□ -1.73
BEST3Q8N1M1 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.23□□□□□ -1.73
BEST3Q8N1M1 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.23□□□□□ -1.73
BEST3Q8N1M1 RPL23AP93-201ENST00000440847 484 ntBASIC4.23□□□□□ -1.73
BEST3Q8N1M1 RAB11AP1-201ENST00000442978 646 ntBASIC4.23□□□□□ -1.73
BEST3Q8N1M1 COX6CP18-201ENST00000448769 222 ntBASIC4.23□□□□□ -1.73
BEST3Q8N1M1 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC4.23□□□□□ -1.73
BEST3Q8N1M1 RPL23AP15-201ENST00000450202 459 ntBASIC4.23□□□□□ -1.73
BEST3Q8N1M1 RFC5P1-201ENST00000454419 874 ntBASIC4.23□□□□□ -1.73
BEST3Q8N1M1 ANKRD26P4-201ENST00000455755 950 ntBASIC4.23□□□□□ -1.73
BEST3Q8N1M1 AC005008.1-201ENST00000456151 612 ntBASIC4.23□□□□□ -1.73
BEST3Q8N1M1 RPL21P126-201ENST00000470049 478 ntBASIC4.23□□□□□ -1.73
BEST3Q8N1M1 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
BEST3Q8N1M1 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.23□□□□□ -1.73
BEST3Q8N1M1 AC093840.1-201ENST00000511599 336 ntBASIC4.23□□□□□ -1.73
BEST3Q8N1M1 AC008837.2-201ENST00000513076 418 ntBASIC4.23□□□□□ -1.73
BEST3Q8N1M1 AC119751.5-201ENST00000514077 770 ntBASIC4.23□□□□□ -1.73
BEST3Q8N1M1 RNU6-488P-201ENST00000515918 99 ntBASIC4.23□□□□□ -1.73
BEST3Q8N1M1 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.23□□□□□ -1.73
BEST3Q8N1M1 AP001636.2-201ENST00000525517 696 ntBASIC4.23□□□□□ -1.73
BEST3Q8N1M1 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC4.23□□□□□ -1.73
BEST3Q8N1M1 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.23□□□□□ -1.73
BEST3Q8N1M1 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC4.23□□□□□ -1.73
BEST3Q8N1M1 AGGF1P6-201ENST00000569213 976 ntBASIC4.23□□□□□ -1.73
BEST3Q8N1M1 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
BEST3Q8N1M1 RN7SL176P-201ENST00000580352 264 ntBASIC4.23□□□□□ -1.73
BEST3Q8N1M1 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC4.23□□□□□ -1.73
BEST3Q8N1M1 AC021171.1-201ENST00000603137 706 ntBASIC4.23□□□□□ -1.73
BEST3Q8N1M1 DUXAP3-201ENST00000603616 594 ntBASIC4.23□□□□□ -1.73
BEST3Q8N1M1 AC005191.1-201ENST00000603950 358 ntBASIC4.23□□□□□ -1.73
BEST3Q8N1M1 AC115286.1-201ENST00000604298 434 ntBASIC4.23□□□□□ -1.73
BEST3Q8N1M1 IMMP1LP1-201ENST00000605170 488 ntBASIC4.23□□□□□ -1.73
BEST3Q8N1M1 AC012409.3-201ENST00000611343 981 ntBASIC4.23□□□□□ -1.73
BEST3Q8N1M1 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.23□□□□□ -1.73
BEST3Q8N1M1 AF001550.2-201ENST00000636643 217 ntBASIC4.23□□□□□ -1.73
BEST3Q8N1M1 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC4.23□□□□□ -1.73
BEST3Q8N1M1 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.23□□□□□ -1.73
BEST3Q8N1M1 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
BEST3Q8N1M1 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
BEST3Q8N1M1 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
BEST3Q8N1M1 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC4.22□□□□□ -1.73
BEST3Q8N1M1 AC104454.1-201ENST00000421341 1401 ntBASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms