Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 PSMA6P4-201ENST00000603247 718 ntBASIC3.27□□□□□ -1.89
LRRC28Q86X40 AL450489.1-201ENST00000612071 468 ntBASIC3.27□□□□□ -1.89
LRRC28Q86X40 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.27□□□□□ -1.89
LRRC28Q86X40 AC034229.5-201ENST00000624258 185 ntBASIC3.27□□□□□ -1.89
LRRC28Q86X40 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
LRRC28Q86X40 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
LRRC28Q86X40 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
LRRC28Q86X40 POMP-202ENST00000460403 1428 ntTSL 3 BASIC3.27□□□□□ -1.89
LRRC28Q86X40 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
LRRC28Q86X40 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
LRRC28Q86X40 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
LRRC28Q86X40 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
LRRC28Q86X40 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
LRRC28Q86X40 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC3.26□□□□□ -1.89
LRRC28Q86X40 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.26□□□□□ -1.89
LRRC28Q86X40 MIR30B-201ENST00000384850 88 ntBASIC3.26□□□□□ -1.89
LRRC28Q86X40 MIR134-201ENST00000385258 73 ntBASIC3.26□□□□□ -1.89
LRRC28Q86X40 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
LRRC28Q86X40 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.26□□□□□ -1.89
LRRC28Q86X40 RPS15AP6-201ENST00000420703 385 ntBASIC3.26□□□□□ -1.89
LRRC28Q86X40 CYCSP53-201ENST00000455540 265 ntBASIC3.26□□□□□ -1.89
LRRC28Q86X40 AC010401.1-201ENST00000463867 348 ntBASIC3.26□□□□□ -1.89
LRRC28Q86X40 RPS4XP22-201ENST00000480755 780 ntBASIC3.26□□□□□ -1.89
LRRC28Q86X40 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.26□□□□□ -1.89
LRRC28Q86X40 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.26□□□□□ -1.89
LRRC28Q86X40 RAC1P2-201ENST00000511164 579 ntBASIC3.26□□□□□ -1.89
LRRC28Q86X40 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.26□□□□□ -1.89
LRRC28Q86X40 RNU2-58P-201ENST00000516403 183 ntBASIC3.26□□□□□ -1.89
LRRC28Q86X40 NDUFB9P3-201ENST00000521269 501 ntBASIC3.26□□□□□ -1.89
LRRC28Q86X40 MTCO1P49-201ENST00000523429 802 ntBASIC3.26□□□□□ -1.89
LRRC28Q86X40 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC3.26□□□□□ -1.89
LRRC28Q86X40 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.26□□□□□ -1.89
LRRC28Q86X40 AC025260.1-201ENST00000548858 430 ntBASIC3.26□□□□□ -1.89
LRRC28Q86X40 NPM1P47-201ENST00000560843 856 ntBASIC3.26□□□□□ -1.89
LRRC28Q86X40 AC006130.2-201ENST00000586202 326 ntBASIC3.26□□□□□ -1.89
LRRC28Q86X40 AC007687.1-201ENST00000602704 304 ntBASIC3.26□□□□□ -1.89
LRRC28Q86X40 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.26□□□□□ -1.89
LRRC28Q86X40 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC3.26□□□□□ -1.89
LRRC28Q86X40 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.26□□□□□ -1.89
LRRC28Q86X40 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC3.26□□□□□ -1.89
LRRC28Q86X40 AL161637.1-201ENST00000622380 412 ntBASIC3.26□□□□□ -1.89
LRRC28Q86X40 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.26□□□□□ -1.89
LRRC28Q86X40 ZNF826P-207ENST00000622273 1910 ntBASIC3.26□□□□□ -1.89
LRRC28Q86X40 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
LRRC28Q86X40 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
LRRC28Q86X40 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.26□□□□□ -1.89
LRRC28Q86X40 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
LRRC28Q86X40 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
LRRC28Q86X40 GABPAP-201ENST00000419271 1356 ntBASIC3.25□□□□□ -1.89
LRRC28Q86X40 AC000367.1-201ENST00000452711 1766 ntBASIC3.25□□□□□ -1.89
LRRC28Q86X40 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
LRRC28Q86X40 ZNF542P-204ENST00000482727 1305 ntBASIC3.25□□□□□ -1.89
LRRC28Q86X40 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.25□□□□□ -1.89
LRRC28Q86X40 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
LRRC28Q86X40 RNU1-75P-201ENST00000347264 129 ntBASIC3.25□□□□□ -1.89
LRRC28Q86X40 RNU6-304P-201ENST00000364855 107 ntBASIC3.25□□□□□ -1.89
LRRC28Q86X40 RNA5SP235-201ENST00000365411 114 ntBASIC3.25□□□□□ -1.89
LRRC28Q86X40 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
LRRC28Q86X40 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC3.25□□□□□ -1.89
LRRC28Q86X40 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
LRRC28Q86X40 NEK4P1-201ENST00000433383 879 ntBASIC3.25□□□□□ -1.89
LRRC28Q86X40 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.25□□□□□ -1.89
LRRC28Q86X40 AC007389.2-201ENST00000434630 306 ntBASIC3.25□□□□□ -1.89
LRRC28Q86X40 RAB9AP5-201ENST00000437794 597 ntBASIC3.25□□□□□ -1.89
LRRC28Q86X40 MTCYBP31-201ENST00000438855 1122 ntBASIC3.25□□□□□ -1.89
LRRC28Q86X40 AL138799.3-201ENST00000438968 350 ntBASIC3.25□□□□□ -1.89
LRRC28Q86X40 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC3.25□□□□□ -1.89
LRRC28Q86X40 RRM2P4-201ENST00000441721 562 ntBASIC3.25□□□□□ -1.89
LRRC28Q86X40 RAB9AP2-201ENST00000443911 597 ntBASIC3.25□□□□□ -1.89
LRRC28Q86X40 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.25□□□□□ -1.89
LRRC28Q86X40 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.25□□□□□ -1.89
LRRC28Q86X40 RPS20P21-201ENST00000466859 343 ntBASIC3.25□□□□□ -1.89
LRRC28Q86X40 AC007688.1-201ENST00000475592 759 ntBASIC3.25□□□□□ -1.89
LRRC28Q86X40 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC3.25□□□□□ -1.89
LRRC28Q86X40 HMGB3P14-201ENST00000494195 599 ntBASIC3.25□□□□□ -1.89
LRRC28Q86X40 FCF1P3-201ENST00000496394 590 ntBASIC3.25□□□□□ -1.89
LRRC28Q86X40 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
LRRC28Q86X40 SNX5P1-201ENST00000505757 1041 ntBASIC3.25□□□□□ -1.89
LRRC28Q86X40 AC110768.1-201ENST00000509222 400 ntBASIC3.25□□□□□ -1.89
LRRC28Q86X40 RFESD-208ENST00000513950 464 ntTSL 5 BASIC3.25□□□□□ -1.89
LRRC28Q86X40 RNA5SP164-201ENST00000516533 110 ntBASIC3.25□□□□□ -1.89
LRRC28Q86X40 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.25□□□□□ -1.89
LRRC28Q86X40 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.25□□□□□ -1.89
LRRC28Q86X40 AC006960.3-201ENST00000561845 705 ntBASIC3.25□□□□□ -1.89
LRRC28Q86X40 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.25□□□□□ -1.89
LRRC28Q86X40 AC034105.4-201ENST00000568304 277 ntBASIC3.25□□□□□ -1.89
LRRC28Q86X40 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.25□□□□□ -1.89
LRRC28Q86X40 AL163642.2-201ENST00000604722 1019 ntBASIC3.25□□□□□ -1.89
LRRC28Q86X40 AL354760.1-201ENST00000608357 643 ntBASIC3.25□□□□□ -1.89
LRRC28Q86X40 AC099778.2-201ENST00000610904 211 ntBASIC3.25□□□□□ -1.89
LRRC28Q86X40 XIST_intron.1-201ENST00000619444 68 ntBASIC3.25□□□□□ -1.89
LRRC28Q86X40 FP236240.3-201ENST00000623061 327 ntBASIC3.25□□□□□ -1.89
LRRC28Q86X40 AF001550.2-201ENST00000636643 217 ntBASIC3.25□□□□□ -1.89
LRRC28Q86X40 AL732372.2-225ENST00000642124 456 ntBASIC3.25□□□□□ -1.89
LRRC28Q86X40 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
LRRC28Q86X40 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
LRRC28Q86X40 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
LRRC28Q86X40 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
LRRC28Q86X40 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.24□□□□□ -1.89
LRRC28Q86X40 AC138393.1-206ENST00000540997 1886 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms