Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 CASC19-261ENST00000641853 1638 ntBASIC4.01□□□□□ -1.77
SCN1BQ07699 AL157700.1-201ENST00000561973 1432 ntBASIC4.01□□□□□ -1.77
SCN1BQ07699 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SCN1BQ07699 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
SCN1BQ07699 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SCN1BQ07699 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4□□□□□ -1.77
SCN1BQ07699 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4□□□□□ -1.77
SCN1BQ07699 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4□□□□□ -1.77
SCN1BQ07699 MTND4P9-201ENST00000507819 1346 ntBASIC4□□□□□ -1.77
SCN1BQ07699 AP001486.2-201ENST00000561652 5113 ntBASIC4□□□□□ -1.77
SCN1BQ07699 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4□□□□□ -1.77
SCN1BQ07699 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4□□□□□ -1.77
SCN1BQ07699 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
SCN1BQ07699 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4□□□□□ -1.77
SCN1BQ07699 AC090337.1-201ENST00000579651 2074 ntBASIC4□□□□□ -1.77
SCN1BQ07699 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SCN1BQ07699 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC4□□□□□ -1.77
SCN1BQ07699 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC4□□□□□ -1.77
SCN1BQ07699 RNA5SP388-201ENST00000362584 119 ntBASIC4□□□□□ -1.77
SCN1BQ07699 RNA5SP305-201ENST00000362665 119 ntBASIC4□□□□□ -1.77
SCN1BQ07699 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SCN1BQ07699 DPPA2P3-201ENST00000411853 655 ntBASIC4□□□□□ -1.77
SCN1BQ07699 AC114755.2-201ENST00000413520 361 ntBASIC4□□□□□ -1.77
SCN1BQ07699 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC4□□□□□ -1.77
SCN1BQ07699 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC4□□□□□ -1.77
SCN1BQ07699 MTND2P16-201ENST00000419987 799 ntBASIC4□□□□□ -1.77
SCN1BQ07699 MTCO3P1-205ENST00000422088 832 ntBASIC4□□□□□ -1.77
SCN1BQ07699 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4□□□□□ -1.77
SCN1BQ07699 USP12PY-201ENST00000427677 1064 ntBASIC4□□□□□ -1.77
SCN1BQ07699 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC4□□□□□ -1.77
SCN1BQ07699 MTCO1P3-201ENST00000429327 192 ntBASIC4□□□□□ -1.77
SCN1BQ07699 RPL23AP16-201ENST00000441715 421 ntBASIC4□□□□□ -1.77
SCN1BQ07699 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC4□□□□□ -1.77
SCN1BQ07699 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4□□□□□ -1.77
SCN1BQ07699 SYPL1P1-201ENST00000473622 768 ntBASIC4□□□□□ -1.77
SCN1BQ07699 AC010301.1-201ENST00000473936 355 ntBASIC4□□□□□ -1.77
SCN1BQ07699 OR5H5P-201ENST00000503164 928 ntBASIC4□□□□□ -1.77
SCN1BQ07699 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4□□□□□ -1.77
SCN1BQ07699 OR5M14P-201ENST00000506803 618 ntBASIC4□□□□□ -1.77
SCN1BQ07699 BTF3P13-201ENST00000513224 490 ntBASIC4□□□□□ -1.77
SCN1BQ07699 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4□□□□□ -1.77
SCN1BQ07699 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC4□□□□□ -1.77
SCN1BQ07699 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC4□□□□□ -1.77
SCN1BQ07699 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC4□□□□□ -1.77
SCN1BQ07699 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4□□□□□ -1.77
SCN1BQ07699 AP003385.6-201ENST00000531603 374 ntBASIC4□□□□□ -1.77
SCN1BQ07699 LRRC6P1-201ENST00000532188 885 ntBASIC4□□□□□ -1.77
SCN1BQ07699 CD69-203ENST00000536709 1020 ntTSL 2 BASIC4□□□□□ -1.77
SCN1BQ07699 APPL2-203ENST00000546731 684 ntTSL 2 BASIC4□□□□□ -1.77
SCN1BQ07699 CFL2-206ENST00000556161 546 ntTSL 4 BASIC4□□□□□ -1.77
SCN1BQ07699 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4□□□□□ -1.77
SCN1BQ07699 YWHAZP1-201ENST00000556286 722 ntBASIC4□□□□□ -1.77
SCN1BQ07699 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4□□□□□ -1.77
SCN1BQ07699 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC4□□□□□ -1.77
SCN1BQ07699 AL669831.4-202ENST00000590817 238 ntBASIC4□□□□□ -1.77
SCN1BQ07699 SNRPGP15-201ENST00000600149 222 ntBASIC4□□□□□ -1.77
SCN1BQ07699 AC096947.1-201ENST00000603233 470 ntBASIC4□□□□□ -1.77
SCN1BQ07699 AL158050.2-201ENST00000605336 568 ntBASIC4□□□□□ -1.77
SCN1BQ07699 AC112220.2-201ENST00000605513 533 ntBASIC4□□□□□ -1.77
SCN1BQ07699 AP002360.3-201ENST00000607673 710 ntBASIC4□□□□□ -1.77
SCN1BQ07699 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC4□□□□□ -1.77
SCN1BQ07699 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC4□□□□□ -1.77
SCN1BQ07699 AL512624.1-201ENST00000613638 469 ntBASIC4□□□□□ -1.77
SCN1BQ07699 AL359715.5-201ENST00000623431 443 ntBASIC4□□□□□ -1.77
SCN1BQ07699 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC4□□□□□ -1.77
SCN1BQ07699 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4□□□□□ -1.77
SCN1BQ07699 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC4□□□□□ -1.77
SCN1BQ07699 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4□□□□□ -1.77
SCN1BQ07699 LINC02471-203ENST00000641941 4752 ntBASIC4□□□□□ -1.77
SCN1BQ07699 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4□□□□□ -1.77
SCN1BQ07699 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SCN1BQ07699 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SCN1BQ07699 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC3.99□□□□□ -1.77
SCN1BQ07699 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
SCN1BQ07699 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SCN1BQ07699 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SCN1BQ07699 RNU6-492P-201ENST00000363035 104 ntBASIC3.99□□□□□ -1.77
SCN1BQ07699 RNU6-1066P-201ENST00000363573 105 ntBASIC3.99□□□□□ -1.77
SCN1BQ07699 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SCN1BQ07699 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.99□□□□□ -1.77
SCN1BQ07699 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
SCN1BQ07699 RNU6-224P-201ENST00000384055 107 ntBASIC3.99□□□□□ -1.77
SCN1BQ07699 MIR620-201ENST00000385232 95 ntBASIC3.99□□□□□ -1.77
SCN1BQ07699 AC092642.1-201ENST00000392417 425 ntBASIC3.99□□□□□ -1.77
SCN1BQ07699 AL590762.2-201ENST00000395798 571 ntBASIC3.99□□□□□ -1.77
SCN1BQ07699 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SCN1BQ07699 MTCO1P56-201ENST00000401674 224 ntBASIC3.99□□□□□ -1.77
SCN1BQ07699 FCF1P5-201ENST00000406490 482 ntBASIC3.99□□□□□ -1.77
SCN1BQ07699 RNA5SP56-201ENST00000410277 118 ntBASIC3.99□□□□□ -1.77
SCN1BQ07699 RNU4-78P-201ENST00000410940 126 ntBASIC3.99□□□□□ -1.77
SCN1BQ07699 AC062016.2-201ENST00000420950 676 ntBASIC3.99□□□□□ -1.77
SCN1BQ07699 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC3.99□□□□□ -1.77
SCN1BQ07699 DPRXP1-201ENST00000426312 460 ntBASIC3.99□□□□□ -1.77
SCN1BQ07699 AC007559.1-201ENST00000428736 355 ntBASIC3.99□□□□□ -1.77
SCN1BQ07699 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.99□□□□□ -1.77
SCN1BQ07699 AC241584.1-201ENST00000438469 1241 ntBASIC3.99□□□□□ -1.77
SCN1BQ07699 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC3.99□□□□□ -1.77
SCN1BQ07699 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC3.99□□□□□ -1.77
SCN1BQ07699 EIF4EBP2P1-201ENST00000450009 343 ntBASIC3.99□□□□□ -1.77
SCN1BQ07699 AC018638.3-201ENST00000461273 132 ntBASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms