Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 AC018754.1-201ENST00000607486 925 ntBASIC2.86□□□□□ -1.95
HIST1H1AQ02539 MIR6867-201ENST00000610636 67 ntBASIC2.86□□□□□ -1.95
HIST1H1AQ02539 MIR6758-201ENST00000620653 63 ntBASIC2.86□□□□□ -1.95
HIST1H1AQ02539 AC092184.1-201ENST00000625042 715 ntBASIC2.86□□□□□ -1.95
HIST1H1AQ02539 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
HIST1H1AQ02539 AF001550.2-201ENST00000636643 217 ntBASIC2.86□□□□□ -1.95
HIST1H1AQ02539 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC2.86□□□□□ -1.95
HIST1H1AQ02539 OR52H1-202ENST00000641796 1061 ntBASIC2.86□□□□□ -1.95
HIST1H1AQ02539 MAPK10-362ENST00000641864 4484 ntBASIC2.86□□□□□ -1.95
HIST1H1AQ02539 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC2.85□□□□□ -1.95
HIST1H1AQ02539 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
HIST1H1AQ02539 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
HIST1H1AQ02539 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
HIST1H1AQ02539 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
HIST1H1AQ02539 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
HIST1H1AQ02539 AL034403.1-201ENST00000399414 885 ntBASIC2.85□□□□□ -1.95
HIST1H1AQ02539 AL049693.1-201ENST00000402760 611 ntBASIC2.85□□□□□ -1.95
HIST1H1AQ02539 AC016769.2-201ENST00000414815 475 ntBASIC2.85□□□□□ -1.95
HIST1H1AQ02539 RPA2P2-201ENST00000419698 796 ntBASIC2.85□□□□□ -1.95
HIST1H1AQ02539 TCEA1P2-201ENST00000420496 906 ntBASIC2.85□□□□□ -1.95
HIST1H1AQ02539 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC2.85□□□□□ -1.95
HIST1H1AQ02539 AC114755.5-201ENST00000447760 831 ntBASIC2.85□□□□□ -1.95
HIST1H1AQ02539 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC2.85□□□□□ -1.95
HIST1H1AQ02539 SLC31A1P1-201ENST00000451221 567 ntBASIC2.85□□□□□ -1.95
HIST1H1AQ02539 RPS23P7-201ENST00000466210 444 ntBASIC2.85□□□□□ -1.95
HIST1H1AQ02539 AC026979.1-201ENST00000492525 396 ntBASIC2.85□□□□□ -1.95
HIST1H1AQ02539 PDLIM1P4-201ENST00000504327 1006 ntBASIC2.85□□□□□ -1.95
HIST1H1AQ02539 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC2.85□□□□□ -1.95
HIST1H1AQ02539 RNA5SP208-201ENST00000516156 78 ntBASIC2.85□□□□□ -1.95
HIST1H1AQ02539 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC2.85□□□□□ -1.95
HIST1H1AQ02539 YPEL5P3-201ENST00000547227 352 ntBASIC2.85□□□□□ -1.95
HIST1H1AQ02539 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC2.85□□□□□ -1.95
HIST1H1AQ02539 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC2.85□□□□□ -1.95
HIST1H1AQ02539 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC2.85□□□□□ -1.95
HIST1H1AQ02539 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC2.85□□□□□ -1.95
HIST1H1AQ02539 AC025884.1-201ENST00000556034 378 ntBASIC2.85□□□□□ -1.95
HIST1H1AQ02539 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC2.85□□□□□ -1.95
HIST1H1AQ02539 AC037471.2-201ENST00000564941 598 ntBASIC2.85□□□□□ -1.95
HIST1H1AQ02539 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC2.85□□□□□ -1.95
HIST1H1AQ02539 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC2.85□□□□□ -1.95
HIST1H1AQ02539 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC2.85□□□□□ -1.95
HIST1H1AQ02539 AF230666.2-201ENST00000602328 725 ntBASIC2.85□□□□□ -1.95
HIST1H1AQ02539 AL606490.9-201ENST00000603331 271 ntBASIC2.85□□□□□ -1.95
HIST1H1AQ02539 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC2.85□□□□□ -1.95
HIST1H1AQ02539 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC2.85□□□□□ -1.95
HIST1H1AQ02539 AC006065.5-201ENST00000623427 349 ntBASIC2.85□□□□□ -1.95
HIST1H1AQ02539 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC2.85□□□□□ -1.95
HIST1H1AQ02539 MIR492-201ENST00000638676 116 ntBASIC2.85□□□□□ -1.95
HIST1H1AQ02539 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC2.85□□□□□ -1.95
HIST1H1AQ02539 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC2.85□□□□□ -1.95
HIST1H1AQ02539 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
HIST1H1AQ02539 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.85□□□□□ -1.95
HIST1H1AQ02539 AL356317.1-201ENST00000396110 1436 ntBASIC2.85□□□□□ -1.95
HIST1H1AQ02539 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
HIST1H1AQ02539 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC2.84□□□□□ -1.95
HIST1H1AQ02539 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
HIST1H1AQ02539 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC2.84□□□□□ -1.95
HIST1H1AQ02539 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC2.84□□□□□ -1.95
HIST1H1AQ02539 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC2.84□□□□□ -1.95
HIST1H1AQ02539 SPRR2C-201ENST00000290702 219 ntBASIC2.84□□□□□ -1.95
HIST1H1AQ02539 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
HIST1H1AQ02539 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC2.84□□□□□ -1.95
HIST1H1AQ02539 CCNB2P1-201ENST00000399411 1150 ntBASIC2.84□□□□□ -1.95
HIST1H1AQ02539 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC2.84□□□□□ -1.95
HIST1H1AQ02539 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC2.84□□□□□ -1.95
HIST1H1AQ02539 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC2.84□□□□□ -1.95
HIST1H1AQ02539 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
HIST1H1AQ02539 RPL17P36-201ENST00000420302 549 ntBASIC2.84□□□□□ -1.95
HIST1H1AQ02539 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC2.84□□□□□ -1.95
HIST1H1AQ02539 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC2.84□□□□□ -1.95
HIST1H1AQ02539 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC2.84□□□□□ -1.95
HIST1H1AQ02539 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC2.84□□□□□ -1.95
HIST1H1AQ02539 AC006480.1-201ENST00000449887 378 ntBASIC2.84□□□□□ -1.95
HIST1H1AQ02539 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC2.84□□□□□ -1.95
HIST1H1AQ02539 CYCSP53-201ENST00000455540 265 ntBASIC2.84□□□□□ -1.95
HIST1H1AQ02539 AC087312.1-201ENST00000471411 480 ntBASIC2.84□□□□□ -1.95
HIST1H1AQ02539 RPL23AP73-201ENST00000492507 471 ntBASIC2.84□□□□□ -1.95
HIST1H1AQ02539 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC2.84□□□□□ -1.95
HIST1H1AQ02539 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC2.84□□□□□ -1.95
HIST1H1AQ02539 AC021146.5-201ENST00000503544 545 ntBASIC2.84□□□□□ -1.95
HIST1H1AQ02539 MTCO1P35-201ENST00000515270 228 ntBASIC2.84□□□□□ -1.95
HIST1H1AQ02539 RN7SKP122-201ENST00000515923 296 ntBASIC2.84□□□□□ -1.95
HIST1H1AQ02539 RNA5SP164-201ENST00000516533 110 ntBASIC2.84□□□□□ -1.95
HIST1H1AQ02539 TBCA-203ENST00000517679 545 ntTSL 3 BASIC2.84□□□□□ -1.95
HIST1H1AQ02539 NDUFA5P2-201ENST00000519723 344 ntBASIC2.84□□□□□ -1.95
HIST1H1AQ02539 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC2.84□□□□□ -1.95
HIST1H1AQ02539 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC2.84□□□□□ -1.95
HIST1H1AQ02539 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC2.84□□□□□ -1.95
HIST1H1AQ02539 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC2.84□□□□□ -1.95
HIST1H1AQ02539 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC2.84□□□□□ -1.95
HIST1H1AQ02539 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC2.84□□□□□ -1.95
HIST1H1AQ02539 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC2.84□□□□□ -1.95
HIST1H1AQ02539 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC2.84□□□□□ -1.95
HIST1H1AQ02539 MIR4700-201ENST00000578311 74 ntBASIC2.84□□□□□ -1.95
HIST1H1AQ02539 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC2.84□□□□□ -1.95
HIST1H1AQ02539 KLKP1-201ENST00000595979 403 ntBASIC2.84□□□□□ -1.95
HIST1H1AQ02539 AC009948.4-201ENST00000604692 675 ntBASIC2.84□□□□□ -1.95
HIST1H1AQ02539 AL365400.2-201ENST00000605604 902 ntBASIC2.84□□□□□ -1.95
HIST1H1AQ02539 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC2.84□□□□□ -1.95
HIST1H1AQ02539 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms