Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
RAE1P78406 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.54□□□□□ -1.68
RAE1P78406 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RAE1P78406 OR4A15-201ENST00000314706 1035 ntBASIC4.54□□□□□ -1.68
RAE1P78406 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.54□□□□□ -1.68
RAE1P78406 CUBN-201ENST00000377823 705 ntTSL 3 BASIC4.54□□□□□ -1.68
RAE1P78406 RNU2-50P-201ENST00000410494 143 ntBASIC4.54□□□□□ -1.68
RAE1P78406 RN7SKP213-201ENST00000410746 298 ntBASIC4.54□□□□□ -1.68
RAE1P78406 RPL7P8-201ENST00000411964 730 ntBASIC4.54□□□□□ -1.68
RAE1P78406 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.54□□□□□ -1.68
RAE1P78406 OR2AM1P-201ENST00000422137 422 ntBASIC4.54□□□□□ -1.68
RAE1P78406 AL049610.1-201ENST00000423374 372 ntBASIC4.54□□□□□ -1.68
RAE1P78406 PSMD10P3-201ENST00000437000 448 ntBASIC4.54□□□□□ -1.68
RAE1P78406 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC4.54□□□□□ -1.68
RAE1P78406 AL138878.2-201ENST00000440581 1241 ntBASIC4.54□□□□□ -1.68
RAE1P78406 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC4.54□□□□□ -1.68
RAE1P78406 AURKAPS2-201ENST00000454983 333 ntBASIC4.54□□□□□ -1.68
RAE1P78406 CYCSP34-201ENST00000458172 304 ntBASIC4.54□□□□□ -1.68
RAE1P78406 RAD51AP1P1-201ENST00000484195 1001 ntBASIC4.54□□□□□ -1.68
RAE1P78406 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC4.54□□□□□ -1.68
RAE1P78406 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.54□□□□□ -1.68
RAE1P78406 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC4.54□□□□□ -1.68
RAE1P78406 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.54□□□□□ -1.68
RAE1P78406 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC4.54□□□□□ -1.68
RAE1P78406 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
RAE1P78406 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.54□□□□□ -1.68
RAE1P78406 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
RAE1P78406 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC4.54□□□□□ -1.68
RAE1P78406 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC4.54□□□□□ -1.68
RAE1P78406 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC4.54□□□□□ -1.68
RAE1P78406 ROCK1P1-201ENST00000573767 549 ntBASIC4.54□□□□□ -1.68
RAE1P78406 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.54□□□□□ -1.68
RAE1P78406 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.54□□□□□ -1.68
RAE1P78406 AC073544.2-201ENST00000601155 540 ntBASIC4.54□□□□□ -1.68
RAE1P78406 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC4.54□□□□□ -1.68
RAE1P78406 AC083899.3-201ENST00000603413 594 ntBASIC4.54□□□□□ -1.68
RAE1P78406 AL353600.1-201ENST00000608148 251 ntBASIC4.54□□□□□ -1.68
RAE1P78406 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.54□□□□□ -1.68
RAE1P78406 AC106028.5-201ENST00000610332 395 ntBASIC4.54□□□□□ -1.68
RAE1P78406 AC016769.4-201ENST00000616893 535 ntBASIC4.54□□□□□ -1.68
RAE1P78406 AC092656.1-203ENST00000624134 423 ntBASIC4.54□□□□□ -1.68
RAE1P78406 AC090582.1-201ENST00000636321 199 ntBASIC4.54□□□□□ -1.68
RAE1P78406 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
RAE1P78406 AC107081.3-201ENST00000612715 2034 ntBASIC4.54□□□□□ -1.68
RAE1P78406 INTS6P1-201ENST00000504674 2530 ntBASIC4.54□□□□□ -1.68
RAE1P78406 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
RAE1P78406 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
RAE1P78406 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
RAE1P78406 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
RAE1P78406 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
RAE1P78406 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC4.54□□□□□ -1.68
RAE1P78406 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
RAE1P78406 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RAE1P78406 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
RAE1P78406 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
RAE1P78406 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RAE1P78406 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.53□□□□□ -1.68
RAE1P78406 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
RAE1P78406 SAMMSON-226ENST00000642089 1582 ntBASIC4.53□□□□□ -1.68
RAE1P78406 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
RAE1P78406 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.53□□□□□ -1.68
RAE1P78406 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RAE1P78406 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
RAE1P78406 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RAE1P78406 AP000756.2-201ENST00000624168 2567 ntBASIC4.53□□□□□ -1.68
RAE1P78406 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RAE1P78406 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
RAE1P78406 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.53□□□□□ -1.68
RAE1P78406 RNA5SP507-201ENST00000363603 121 ntBASIC4.53□□□□□ -1.68
RAE1P78406 Y_RNA.553-201ENST00000384670 102 ntBASIC4.53□□□□□ -1.68
RAE1P78406 AL590762.2-201ENST00000395798 571 ntBASIC4.53□□□□□ -1.68
RAE1P78406 FABP12P1-201ENST00000401911 322 ntBASIC4.53□□□□□ -1.68
RAE1P78406 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
RAE1P78406 RNU4-34P-201ENST00000410431 124 ntBASIC4.53□□□□□ -1.68
RAE1P78406 AC114755.2-201ENST00000413520 361 ntBASIC4.53□□□□□ -1.68
RAE1P78406 RPL23AP27-201ENST00000415161 451 ntBASIC4.53□□□□□ -1.68
RAE1P78406 AL031779.1-201ENST00000415663 330 ntBASIC4.53□□□□□ -1.68
RAE1P78406 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC4.53□□□□□ -1.68
RAE1P78406 NIPA2P1-201ENST00000426223 976 ntBASIC4.53□□□□□ -1.68
RAE1P78406 OFD1P12Y-201ENST00000427963 1207 ntBASIC4.53□□□□□ -1.68
RAE1P78406 OR2B7P-201ENST00000429302 934 ntBASIC4.53□□□□□ -1.68
RAE1P78406 RPS27P18-201ENST00000431701 247 ntBASIC4.53□□□□□ -1.68
RAE1P78406 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.53□□□□□ -1.68
RAE1P78406 UBE2FP3-201ENST00000436366 524 ntBASIC4.53□□□□□ -1.68
RAE1P78406 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC4.53□□□□□ -1.68
RAE1P78406 COX6CP2-201ENST00000444980 225 ntBASIC4.53□□□□□ -1.68
RAE1P78406 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC4.53□□□□□ -1.68
RAE1P78406 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC4.53□□□□□ -1.68
RAE1P78406 KATNBL1P6-201ENST00000453433 915 ntBASIC4.53□□□□□ -1.68
RAE1P78406 ZNF114P1-201ENST00000453500 292 ntBASIC4.53□□□□□ -1.68
RAE1P78406 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC4.53□□□□□ -1.68
RAE1P78406 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC4.53□□□□□ -1.68
RAE1P78406 AC013828.1-201ENST00000481845 158 ntBASIC4.53□□□□□ -1.68
RAE1P78406 AC006499.5-201ENST00000505037 514 ntBASIC4.53□□□□□ -1.68
RAE1P78406 AC091868.1-201ENST00000508746 304 ntBASIC4.53□□□□□ -1.68
RAE1P78406 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.53□□□□□ -1.68
RAE1P78406 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC4.53□□□□□ -1.68
RAE1P78406 AP000790.1-201ENST00000528891 737 ntBASIC4.53□□□□□ -1.68
RAE1P78406 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC4.53□□□□□ -1.68
RAE1P78406 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms